RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 TTC6Q86TZ1 520 aa13.16□□□□□ -0.3
HMGN1P35-201ENST00000303758 PROCA1Q8NCQ7 364 aaPredicted RBP13.16□□□□□ -0.3
HMGN1P35-201ENST00000303758 GPATCH3Q96I76 525 aa13.16□□□□□ -0.3
HMGN1P35-201ENST00000303758 CRNKL1Q9BZJ0 848 aaKnown RBP13.16□□□□□ -0.3
HMGN1P35-201ENST00000303758 SMARCA5O60264 1052 aaPredicted RBP13.15□□□□□ -0.3
HMGN1P35-201ENST00000303758 POLR3DP05423 398 aaPredicted RBP13.15□□□□□ -0.3
HMGN1P35-201ENST00000303758 ATP5JP18859 108 aa13.15□□□□□ -0.3
HMGN1P35-201ENST00000303758 FCGRTP55899 365 aa13.15□□□□□ -0.3
HMGN1P35-201ENST00000303758 RRP1P56182 461 aaKnown RBP13.15□□□□□ -0.3
HMGN1P35-201ENST00000303758 RRP1BQ14684 758 aaKnown RBP13.15□□□□□ -0.3
HMGN1P35-201ENST00000303758 EDC3Q96F86 508 aaKnown RBP13.15□□□□□ -0.3
HMGN1P35-201ENST00000303758 RIOK1Q9BRS2 568 aaKnown RBP13.15□□□□□ -0.3
HMGN1P35-201ENST00000303758 DNAJC18Q9H819 358 aa13.15□□□□□ -0.3
HMGN1P35-201ENST00000303758 GINM1Q9NU53 330 aa13.15□□□□□ -0.3
HMGN1P35-201ENST00000303758 TMOD4Q9NZQ9 345 aa13.15□□□□□ -0.3
HMGN1P35-201ENST00000303758 SERPINB13Q9UIV8 391 aa13.15□□□□□ -0.3
HMGN1P35-201ENST00000303758 BAZ2AQ9UIF9 1905 aaKnown RBP13.14□□□□□ -0.31
HMGN1P35-201ENST00000303758 BCRP11274 1271 aa13.14□□□□□ -0.31
HMGN1P35-201ENST00000303758 OSBPP22059 807 aa13.14□□□□□ -0.31
HMGN1P35-201ENST00000303758 MTMR2Q13614 643 aa13.14□□□□□ -0.31
HMGN1P35-201ENST00000303758 TREML2Q5T2D2 321 aa13.14□□□□□ -0.31
HMGN1P35-201ENST00000303758 METTL16Q86W50 562 aaKnown RBP13.14□□□□□ -0.31
HMGN1P35-201ENST00000303758 RAET1EQ8TD07 263 aa13.14□□□□□ -0.31
HMGN1P35-201ENST00000303758 ARMC5Q96C12 935 aa13.14□□□□□ -0.31
HMGN1P35-201ENST00000303758 HAUS7Q99871 368 aa13.14□□□□□ -0.31
HMGN1P35-201ENST00000303758 TMEM106CQ9BVX2 250 aa13.14□□□□□ -0.31
HMGN1P35-201ENST00000303758 ZBTB21Q9ULJ3 1066 aa13.14□□□□□ -0.31
HMGN1P35-201ENST00000303758 MYPNQ86TC9 1320 aa13.13□□□□□ -0.31
HMGN1P35-201ENST00000303758 MYCP01106 439 aaPredicted RBP13.13□□□□□ -0.31
HMGN1P35-201ENST00000303758 ZSCAN25Q6NSZ9 544 aa13.13□□□□□ -0.31
HMGN1P35-201ENST00000303758 TRIM47Q96LD4 638 aa13.13□□□□□ -0.31
HMGN1P35-201ENST00000303758 WDR18Q9BV38 432 aa13.13□□□□□ -0.31
HMGN1P35-201ENST00000303758 EHD4Q9H223 541 aa13.13□□□□□ -0.31
HMGN1P35-201ENST00000303758 ECHDC1Q9NTX5 307 aa13.13□□□□□ -0.31
HMGN1P35-201ENST00000303758 MCM9Q9NXL9 1143 aa13.13□□□□□ -0.31
HMGN1P35-201ENST00000303758 SRRDQ9UH36 339 aa13.13□□□□□ -0.31
HMGN1P35-201ENST00000303758 BRCA2P51587 3418 aa13.13□□□□□ -0.31
HMGN1P35-201ENST00000303758 TCRBV5S4A2TA0A5A2 114 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 USP17L10C9JJH3 530 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 MBD4O95243 580 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 GH2P01242 217 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 ADD2P35612 726 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 BACE1P56817 501 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 IRX3P78415 501 aaPredicted RBP13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 CERKLQ49MI3 558 aaPredicted RBP13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 SH3D19Q5HYK7 790 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 AMOTL1Q8IY63 956 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 LCORLQ8N3X6 602 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 ANKRD13CQ8N6S4 541 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 SH3TC2Q8TF17 1288 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 SDR42E1Q8WUS8 393 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 DDRGK1Q96HY6 314 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 ZNF333Q96JL9 665 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 FEZ1Q99689 392 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 DCTPP1Q9H773 170 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 ARMT1Q9H993 441 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 CABP5Q9NP86 173 aa13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
HMGN1P35-201ENST00000303758 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
HMGN1P35-201ENST00000303758 C19orf81C9J6K1 198 aa13.11□□□□□ -0.31
HMGN1P35-201ENST00000303758 TNPO2O14787 897 aaKnown RBP13.11□□□□□ -0.31
HMGN1P35-201ENST00000303758 CTGFP29279 349 aa13.11□□□□□ -0.31
HMGN1P35-201ENST00000303758 RAB3GAP1Q15042 981 aa13.11□□□□□ -0.31
HMGN1P35-201ENST00000303758 ABCB5Q2M3G0 1257 aa13.11□□□□□ -0.31
HMGN1P35-201ENST00000303758 SHROOM1Q2M3G4 852 aaPredicted RBP13.11□□□□□ -0.31
HMGN1P35-201ENST00000303758 TATDN1Q6P1N9 297 aa13.11□□□□□ -0.31
HMGN1P35-201ENST00000303758 MPHOSPH10O00566 681 aaKnown RBP13.1□□□□□ -0.31
HMGN1P35-201ENST00000303758 GCLCP48506 637 aaPredicted RBP13.1□□□□□ -0.31
HMGN1P35-201ENST00000303758 PLCD1P51178 756 aa13.1□□□□□ -0.31
HMGN1P35-201ENST00000303758 JAG1P78504 1218 aa13.1□□□□□ -0.31
HMGN1P35-201ENST00000303758 PRKCZQ05513 592 aa13.1□□□□□ -0.31
HMGN1P35-201ENST00000303758 ZYXQ15942 572 aaKnown RBP13.1□□□□□ -0.31
HMGN1P35-201ENST00000303758 FAM110CQ1W6H9 321 aa13.1□□□□□ -0.31
HMGN1P35-201ENST00000303758 USP17L2Q6R6M4 530 aa13.1□□□□□ -0.31
HMGN1P35-201ENST00000303758 ASCC2Q9H1I8 757 aaPredicted RBP13.1□□□□□ -0.31
HMGN1P35-201ENST00000303758 BIN2Q9UBW5 565 aaPredicted RBP13.1□□□□□ -0.31
HMGN1P35-201ENST00000303758 GRK4P32298 578 aa13.09□□□□□ -0.31
HMGN1P35-201ENST00000303758 UBE3CQ15386 1083 aa13.09□□□□□ -0.31
HMGN1P35-201ENST00000303758 SLFNL1Q499Z3 407 aa13.09□□□□□ -0.31
HMGN1P35-201ENST00000303758 COA7Q96BR5 231 aa13.09□□□□□ -0.31
HMGN1P35-201ENST00000303758 CRBNQ96SW2 442 aa13.09□□□□□ -0.31
HMGN1P35-201ENST00000303758 DCP1AQ9NPI6 582 aaPredicted RBP13.09□□□□□ -0.31
HMGN1P35-201ENST00000303758 ATP8A2Q9NTI2 1148 aa13.09□□□□□ -0.31
HMGN1P35-201ENST00000303758 TAOK2Q9UL54 1235 aa13.09□□□□□ -0.31
HMGN1P35-201ENST00000303758 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
HMGN1P35-201ENST00000303758 SHMT1P34896 483 aa13.08□□□□□ -0.32
HMGN1P35-201ENST00000303758 USP14P54578 494 aa13.08□□□□□ -0.32
HMGN1P35-201ENST00000303758 UBXN2AP68543 259 aa13.08□□□□□ -0.32
HMGN1P35-201ENST00000303758 TSHZ3Q63HK5 1081 aa13.08□□□□□ -0.32
HMGN1P35-201ENST00000303758 SLAIN1Q8ND83 568 aa13.08□□□□□ -0.32
HMGN1P35-201ENST00000303758 SWAP70Q9UH65 585 aa13.08□□□□□ -0.32
HMGN1P35-201ENST00000303758 GABRQQ9UN88 632 aa13.08□□□□□ -0.32
HMGN1P35-201ENST00000303758 SLC4A4Q9Y6R1 1079 aa13.08□□□□□ -0.32
HMGN1P35-201ENST00000303758 ERC2O15083 957 aa13.07□□□□□ -0.32
HMGN1P35-201ENST00000303758 PRKAB2O43741 272 aa13.07□□□□□ -0.32
HMGN1P35-201ENST00000303758 CYP2D6P10635 497 aa13.07□□□□□ -0.32
HMGN1P35-201ENST00000303758 EN2P19622 333 aaPredicted RBP13.07□□□□□ -0.32
HMGN1P35-201ENST00000303758 HOXA7P31268 230 aaPredicted RBP13.07□□□□□ -0.32
HMGN1P35-201ENST00000303758 HERVK_113P62684 666 aa13.07□□□□□ -0.32
HMGN1P35-201ENST00000303758 LRRFIP1Q32MZ4 808 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms