RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 GOLGA6CA6NDK9 693 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 CCDC160A6NGH7 325 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 GOLGA6DP0CG33 693 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 ATP5DP30049 168 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 ZNF496Q96IT1 587 aaPredicted RBP15.54■□□□□ 0.08
PRKCB-201ENST00000303531 ORAI2Q96SN7 254 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 SLF1Q9BQI6 1058 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 XPO4Q9C0E2 1151 aaKnown RBP15.54■□□□□ 0.08
PRKCB-201ENST00000303531 GOLGA6AQ9NYA3 693 aa15.54■□□□□ 0.08
PRKCB-201ENST00000303531 STX10O60499 249 aa15.53■□□□□ 0.08
PRKCB-201ENST00000303531 NEURL1BA8MQ27 555 aa15.53■□□□□ 0.08
PRKCB-201ENST00000303531 ERCC5P28715 1186 aaPredicted RBP15.53■□□□□ 0.08
PRKCB-201ENST00000303531 KIAA1524Q8TCG1 905 aa15.53■□□□□ 0.08
PRKCB-201ENST00000303531 PSMB7Q99436 277 aa15.53■□□□□ 0.08
PRKCB-201ENST00000303531 CSRNP2Q9H175 543 aa15.53■□□□□ 0.08
PRKCB-201ENST00000303531 GLT8D2Q9H1C3 349 aa15.53■□□□□ 0.08
PRKCB-201ENST00000303531 TRIM31Q9BZY9 425 aa15.53■□□□□ 0.08
PRKCB-201ENST00000303531 MAGEA1P43355 309 aa15.53■□□□□ 0.08
PRKCB-201ENST00000303531 PSMC4P43686 418 aa15.53■□□□□ 0.08
PRKCB-201ENST00000303531 INTS8Q75QN2 995 aaKnown RBP15.53■□□□□ 0.08
PRKCB-201ENST00000303531 SMAP1Q8IYB5 467 aaPredicted RBP15.53■□□□□ 0.08
PRKCB-201ENST00000303531 UBL4BQ8N7F7 174 aa15.53■□□□□ 0.08
PRKCB-201ENST00000303531 ARHGEF35A5YM69 484 aa15.53■□□□□ 0.08
PRKCB-201ENST00000303531 CALCRLQ16602 461 aa15.53■□□□□ 0.08
PRKCB-201ENST00000303531 ARHGEF10LQ9HCE6 1279 aa15.53■□□□□ 0.08
PRKCB-201ENST00000303531 NDUFAB1O14561 156 aa15.53■□□□□ 0.08
PRKCB-201ENST00000303531 PTH1RQ03431 593 aa15.52■□□□□ 0.08
PRKCB-201ENST00000303531 CABP7Q86V35 215 aa15.52■□□□□ 0.08
PRKCB-201ENST00000303531 UIMC1Q96RL1 719 aa15.52■□□□□ 0.08
PRKCB-201ENST00000303531 SERTAD1Q9UHV2 236 aa15.52■□□□□ 0.08
PRKCB-201ENST00000303531 MAP7D1Q3KQU3 841 aa15.52■□□□□ 0.08
PRKCB-201ENST00000303531 ARID4AP29374 1257 aaPredicted RBP15.52■□□□□ 0.08
PRKCB-201ENST00000303531 ALDH3A1P30838 453 aa15.52■□□□□ 0.08
PRKCB-201ENST00000303531 CFAP157Q5JU67 520 aa15.52■□□□□ 0.08
PRKCB-201ENST00000303531 MYSM1Q5VVJ2 828 aa15.52■□□□□ 0.08
PRKCB-201ENST00000303531 RASSF4Q9H2L5 321 aa15.52■□□□□ 0.08
PRKCB-201ENST00000303531 CCNL1Q9UK58 526 aaPredicted RBP15.52■□□□□ 0.08
PRKCB-201ENST00000303531 CCDC14Q49A88 953 aa15.52■□□□□ 0.07
PRKCB-201ENST00000303531 A0A0D9SFI3 127 aa15.52■□□□□ 0.07
PRKCB-201ENST00000303531 RAD51AP2Q09MP3 1159 aa15.52■□□□□ 0.07
PRKCB-201ENST00000303531 B4GALNT4Q76KP1 1039 aa15.52■□□□□ 0.07
PRKCB-201ENST00000303531 MAEAQ7L5Y9 396 aa15.52■□□□□ 0.07
PRKCB-201ENST00000303531 SSH2Q76I76 1423 aa15.52■□□□□ 0.07
PRKCB-201ENST00000303531 ADALQ6DHV7 355 aa15.52■□□□□ 0.07
PRKCB-201ENST00000303531 STIM2Q9P246 746 aa15.52■□□□□ 0.07
PRKCB-201ENST00000303531 DNAJC10Q8IXB1 793 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 NELFCDQ8IXH7 590 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 CEP104O60308 925 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 USP44Q9H0E7 712 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 CLEC11AQ9Y240 323 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 SLC1A4P43007 532 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 ZNF365Q70YC5 407 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 PALD1Q9ULE6 856 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 ECM2O94769 699 aaPredicted RBP15.51■□□□□ 0.07
PRKCB-201ENST00000303531 LACTBP83111 547 aaPredicted RBP15.51■□□□□ 0.07
PRKCB-201ENST00000303531 KLHL7Q8IXQ5 586 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 SSH3Q8TE77 659 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 MRRFQ96E11 262 aaKnown RBP15.51■□□□□ 0.07
PRKCB-201ENST00000303531 NR1I2O75469 434 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 PFKFB1P16118 471 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 ZYXQ15942 572 aaKnown RBP15.51■□□□□ 0.07
PRKCB-201ENST00000303531 DNM3Q9UQ16 869 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 ADGRL2O95490 1459 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 GOLGA6BA6NDN3 693 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 ADKP55263 362 aaKnown RBP15.51■□□□□ 0.07
PRKCB-201ENST00000303531 LIN9Q5TKA1 542 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 MAPKAPK5Q8IW41 473 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 LZTS2Q9BRK4 669 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 CCDC87Q9NVE4 849 aa15.51■□□□□ 0.07
PRKCB-201ENST00000303531 FAM47AQ5JRC9 791 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 CTTNBP2NLQ9P2B4 639 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 EXOC7Q9UPT5 735 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 DDX39AO00148 427 aaKnown RBP15.5■□□□□ 0.07
PRKCB-201ENST00000303531 KLHL30Q0D2K2 578 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 CERS3Q8IU89 383 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 IFT74Q96LB3 600 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 KIAA1468Q9P260 1216 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 MAP3K9P80192 1104 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 TFAP4Q01664 338 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 SWAP70Q9UH65 585 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 PPARAQ07869 468 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 ZNF274Q96GC6 653 aaPredicted RBP15.5■□□□□ 0.07
PRKCB-201ENST00000303531 RABEP2Q9H5N1 569 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 ANAPC4Q9UJX5 808 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 TPCN1Q9ULQ1 816 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 STK24Q9Y6E0 443 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 PLXNC1O60486 1568 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 HSPA2P54652 639 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 USH1GQ495M9 461 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 MYCT1Q8N699 235 aa15.5■□□□□ 0.07
PRKCB-201ENST00000303531 MAST3O60307 1309 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 DAAM2Q86T65 1068 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 TGFBRAP1Q8WUH2 860 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 ATP7AQ04656 1500 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 STRN3Q13033 797 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 SFMBT2Q5VUG0 894 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 CDCA7Q9BWT1 371 aaPredicted RBP15.49■□□□□ 0.07
PRKCB-201ENST00000303531 CEP128Q6ZU80 1094 aa15.49■□□□□ 0.07
PRKCB-201ENST00000303531 FAM207AQ9NSI2 230 aaPredicted RBP15.49■□□□□ 0.07
PRKCB-201ENST00000303531 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 265.9 ms