RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 SLC39A14Q15043 492 aa22.49■■□□□ 1.19
HOXC4-201ENST00000303406 SF3A1Q15459 793 aaKnown RBP22.49■■□□□ 1.19
HOXC4-201ENST00000303406 NUP133Q8WUM0 1156 aa22.49■■□□□ 1.19
HOXC4-201ENST00000303406 MAP3K14Q99558 947 aa22.49■■□□□ 1.19
HOXC4-201ENST00000303406 FOXP1Q9H334 677 aaPredicted RBP22.49■■□□□ 1.19
HOXC4-201ENST00000303406 COL11A2P13942 1736 aaPredicted RBP22.49■■□□□ 1.19
HOXC4-201ENST00000303406 PRPF3O43395 683 aaKnown RBP22.48■■□□□ 1.19
HOXC4-201ENST00000303406 SNW1Q13573 536 aaKnown RBP22.48■■□□□ 1.19
HOXC4-201ENST00000303406 GNL2Q13823 731 aaKnown RBP22.48■■□□□ 1.19
HOXC4-201ENST00000303406 GRIK5Q16478 980 aa22.48■■□□□ 1.19
HOXC4-201ENST00000303406 JMYQ8N9B5 988 aa22.48■■□□□ 1.19
HOXC4-201ENST00000303406 FSIP1Q8NA03 581 aa22.48■■□□□ 1.19
HOXC4-201ENST00000303406 FAM200AQ8TCP9 573 aa22.48■■□□□ 1.19
HOXC4-201ENST00000303406 GOLPH3LQ9H4A5 285 aa22.48■■□□□ 1.19
HOXC4-201ENST00000303406 TCP11L1Q9NUJ3 509 aa22.48■■□□□ 1.19
HOXC4-201ENST00000303406 CDK5RAP2Q96SN8 1893 aa22.48■■□□□ 1.19
HOXC4-201ENST00000303406 C6orf229H3BNL8 230 aa22.47■■□□□ 1.19
HOXC4-201ENST00000303406 KINO60870 393 aaKnown RBP22.47■■□□□ 1.19
HOXC4-201ENST00000303406 PRDM1O75626 825 aa22.47■■□□□ 1.19
HOXC4-201ENST00000303406 CYP2D6P10635 497 aa22.47■■□□□ 1.19
HOXC4-201ENST00000303406 FUT2Q10981 343 aa22.47■■□□□ 1.19
HOXC4-201ENST00000303406 DGKHQ86XP1 1220 aa22.47■■□□□ 1.19
HOXC4-201ENST00000303406 MASTLQ96GX5 879 aa22.47■■□□□ 1.19
HOXC4-201ENST00000303406 MRVI1Q9Y6F6 885 aa22.47■■□□□ 1.19
HOXC4-201ENST00000303406 USP17L8P0C7I0 530 aa22.47■■□□□ 1.19
HOXC4-201ENST00000303406 XBP1P17861 261 aa22.47■■□□□ 1.19
HOXC4-201ENST00000303406 AKAP17AQ02040 695 aaKnown RBP22.47■■□□□ 1.19
HOXC4-201ENST00000303406 DIXDC1Q155Q3 683 aa22.47■■□□□ 1.19
HOXC4-201ENST00000303406 CAMK4Q16566 473 aa22.47■■□□□ 1.19
HOXC4-201ENST00000303406 SASS6Q6UVJ0 657 aa22.47■■□□□ 1.19
HOXC4-201ENST00000303406 ZNF287Q9HBT7 754 aa22.47■■□□□ 1.19
HOXC4-201ENST00000303406 MORC2Q9Y6X9 1032 aaPredicted RBP22.47■■□□□ 1.19
HOXC4-201ENST00000303406 MYH6P13533 1939 aa22.46■■□□□ 1.19
HOXC4-201ENST00000303406 BTDP43251 543 aa22.46■■□□□ 1.19
HOXC4-201ENST00000303406 MFSD14BQ5SR56 506 aa22.46■■□□□ 1.19
HOXC4-201ENST00000303406 TMTC3Q6ZXV5 915 aa22.46■■□□□ 1.19
HOXC4-201ENST00000303406 NOSTRINQ8IVI9 506 aa22.46■■□□□ 1.19
HOXC4-201ENST00000303406 FMR1NBQ8N0W7 255 aaPredicted RBP22.46■■□□□ 1.19
HOXC4-201ENST00000303406 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.46■■□□□ 1.19
HOXC4-201ENST00000303406 FOCADQ5VW36 1801 aa22.45■■□□□ 1.18
HOXC4-201ENST00000303406 TSPY2A6NKD2 308 aa22.45■■□□□ 1.18
HOXC4-201ENST00000303406 ESPNB1AK53 854 aa22.45■■□□□ 1.18
HOXC4-201ENST00000303406 MMP10P09238 476 aa22.45■■□□□ 1.18
HOXC4-201ENST00000303406 CMA1P23946 247 aa22.45■■□□□ 1.18
HOXC4-201ENST00000303406 GUCY1A2P33402 732 aa22.45■■□□□ 1.18
HOXC4-201ENST00000303406 PTPAQ15257 358 aa22.45■■□□□ 1.18
HOXC4-201ENST00000303406 MPNDQ8N594 471 aa22.45■■□□□ 1.18
HOXC4-201ENST00000303406 FAM237AA0A1B0GTK4 181 aa22.44■■□□□ 1.18
HOXC4-201ENST00000303406 RILPL1Q5EBL4 403 aa22.44■■□□□ 1.18
HOXC4-201ENST00000303406 AXDND1Q5T1B0 1012 aaPredicted RBP22.44■■□□□ 1.18
HOXC4-201ENST00000303406 DIS3L2Q8IYB7 885 aaKnown RBP22.44■■□□□ 1.18
HOXC4-201ENST00000303406 CTCFLQ8NI51 663 aaPredicted RBP22.44■■□□□ 1.18
HOXC4-201ENST00000303406 CKAP2LQ8IYA6 745 aa22.43■■□□□ 1.18
HOXC4-201ENST00000303406 TGFBRAP1Q8WUH2 860 aa22.43■■□□□ 1.18
HOXC4-201ENST00000303406 TMX4Q9H1E5 349 aaPredicted RBP22.43■■□□□ 1.18
HOXC4-201ENST00000303406 CCDC39Q9UFE4 941 aa22.43■■□□□ 1.18
HOXC4-201ENST00000303406 KIF5BP33176 963 aa22.42■■□□□ 1.18
HOXC4-201ENST00000303406 RHBDL3P58872 404 aa22.42■■□□□ 1.18
HOXC4-201ENST00000303406 EVX2Q03828 476 aa22.42■■□□□ 1.18
HOXC4-201ENST00000303406 PKN1Q16512 942 aa22.42■■□□□ 1.18
HOXC4-201ENST00000303406 FAM47AQ5JRC9 791 aa22.42■■□□□ 1.18
HOXC4-201ENST00000303406 STYK1Q6J9G0 422 aa22.42■■□□□ 1.18
HOXC4-201ENST00000303406 RCSD1Q6JBY9 416 aa22.42■■□□□ 1.18
HOXC4-201ENST00000303406 TEX11Q8IYF3 940 aa22.42■■□□□ 1.18
HOXC4-201ENST00000303406 EYA3Q99504 573 aa22.42■■□□□ 1.18
HOXC4-201ENST00000303406 ZC3H12CQ9C0D7 883 aaKnown RBP22.42■■□□□ 1.18
HOXC4-201ENST00000303406 RRAGDQ9NQL2 400 aaPredicted RBP22.42■■□□□ 1.18
HOXC4-201ENST00000303406 ZSCAN30Q86W11 494 aa22.41■■□□□ 1.18
HOXC4-201ENST00000303406 TIGD1Q96MW7 591 aa22.41■■□□□ 1.18
HOXC4-201ENST00000303406 CNTNAP5Q8WYK1 1306 aa22.41■■□□□ 1.18
HOXC4-201ENST00000303406 UBE2Q2LH0YL09 131 aa22.41■■□□□ 1.18
HOXC4-201ENST00000303406 CUTAO60888 179 aa22.41■■□□□ 1.18
HOXC4-201ENST00000303406 CLCN1P35523 988 aa22.41■■□□□ 1.18
HOXC4-201ENST00000303406 TFAP4Q01664 338 aa22.41■■□□□ 1.18
HOXC4-201ENST00000303406 DPP8Q6V1X1 898 aaPredicted RBP22.41■■□□□ 1.18
HOXC4-201ENST00000303406 MKNK2Q9HBH9 465 aa22.41■■□□□ 1.18
HOXC4-201ENST00000303406 BTBD18B2RXH4 712 aa22.4■■□□□ 1.18
HOXC4-201ENST00000303406 PLEKHA8P1O95397 391 aa22.4■■□□□ 1.18
HOXC4-201ENST00000303406 STX1AQ16623 288 aa22.4■■□□□ 1.18
HOXC4-201ENST00000303406 ANO6Q4KMQ2 910 aa22.4■■□□□ 1.18
HOXC4-201ENST00000303406 C16orf86Q6ZW13 317 aa22.4■■□□□ 1.18
HOXC4-201ENST00000303406 PIAS4Q8N2W9 510 aaPredicted RBP22.4■■□□□ 1.18
HOXC4-201ENST00000303406 PHF20Q9BVI0 1012 aa22.4■■□□□ 1.18
HOXC4-201ENST00000303406 KAT14Q9H8E8 782 aa22.4■■□□□ 1.18
HOXC4-201ENST00000303406 FLT1P17948 1338 aa22.4■■□□□ 1.18
HOXC4-201ENST00000303406 GNAQP50148 359 aa22.39■■□□□ 1.17
HOXC4-201ENST00000303406 NDUFA8P51970 172 aa22.39■■□□□ 1.17
HOXC4-201ENST00000303406 GTF2IP78347 998 aa22.39■■□□□ 1.17
HOXC4-201ENST00000303406 MAPKAPK5Q8IW41 473 aa22.39■■□□□ 1.17
HOXC4-201ENST00000303406 ZNF444Q8N0Y2 327 aaPredicted RBP22.39■■□□□ 1.17
HOXC4-201ENST00000303406 KCNJ14Q9UNX9 436 aa22.39■■□□□ 1.17
HOXC4-201ENST00000303406 HPSEQ9Y251 543 aa22.39■■□□□ 1.17
HOXC4-201ENST00000303406 MYH1P12882 1939 aa22.38■■□□□ 1.17
HOXC4-201ENST00000303406 FAM177A1Q8N128 213 aaPredicted RBP22.38■■□□□ 1.17
HOXC4-201ENST00000303406 CMTR1Q8N1G2 835 aaKnown RBP22.38■■□□□ 1.17
HOXC4-201ENST00000303406 BRMS1Q9HCU9 246 aa22.38■■□□□ 1.17
HOXC4-201ENST00000303406 IL17RBQ9NRM6 502 aa22.38■■□□□ 1.17
HOXC4-201ENST00000303406 USP25Q9UHP3 1055 aa22.38■■□□□ 1.17
HOXC4-201ENST00000303406 NOL7Q9UMY1 257 aaKnown RBP22.38■■□□□ 1.17
HOXC4-201ENST00000303406 CEP131Q9UPN4 1083 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms