RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 GJB4Q9NTQ9 266 aa16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 RBM28Q9NW13 759 aaKnown RBP16.84■□□□□ 0.29
SHCBP1-201ENST00000303383 FLT1P17948 1338 aa16.83■□□□□ 0.29
SHCBP1-201ENST00000303383 PPIP5K2O43314 1243 aa16.83■□□□□ 0.29
SHCBP1-201ENST00000303383 NMT2O60551 498 aa16.83■□□□□ 0.29
SHCBP1-201ENST00000303383 XBP1P17861 261 aa16.83■□□□□ 0.29
SHCBP1-201ENST00000303383 NT5C2P49902 561 aa16.83■□□□□ 0.29
SHCBP1-201ENST00000303383 AOC3Q16853 763 aa16.83■□□□□ 0.29
SHCBP1-201ENST00000303383 KRT40Q6A162 431 aa16.83■□□□□ 0.29
SHCBP1-201ENST00000303383 FAM217BQ9NTX9 383 aaPredicted RBP16.83■□□□□ 0.29
SHCBP1-201ENST00000303383 USP40Q9NVE5 1235 aa16.83■□□□□ 0.29
SHCBP1-201ENST00000303383 NTRK3Q16288 839 aa16.83■□□□□ 0.28
SHCBP1-201ENST00000303383 KIAA0825Q8IV33 1275 aa16.83■□□□□ 0.28
SHCBP1-201ENST00000303383 CERS5Q8N5B7 392 aa16.83■□□□□ 0.28
SHCBP1-201ENST00000303383 MKRN1Q9UHC7 482 aaKnown RBP16.83■□□□□ 0.28
SHCBP1-201ENST00000303383 DEXIO95424 95 aa16.83■□□□□ 0.28
SHCBP1-201ENST00000303383 PLCD1P51178 756 aa16.83■□□□□ 0.28
SHCBP1-201ENST00000303383 STK36Q9NRP7 1315 aa16.82■□□□□ 0.28
SHCBP1-201ENST00000303383 DDAH1O94760 285 aa16.82■□□□□ 0.28
SHCBP1-201ENST00000303383 GAS2L3Q86XJ1 694 aa16.82■□□□□ 0.28
SHCBP1-201ENST00000303383 LETM1O95202 739 aaPredicted RBP16.82■□□□□ 0.28
SHCBP1-201ENST00000303383 STK38Q15208 465 aa16.82■□□□□ 0.28
SHCBP1-201ENST00000303383 STX8Q9UNK0 236 aa16.82■□□□□ 0.28
SHCBP1-201ENST00000303383 MTMR7Q9Y216 660 aa16.82■□□□□ 0.28
SHCBP1-201ENST00000303383 SLX4Q8IY92 1834 aa16.82■□□□□ 0.28
SHCBP1-201ENST00000303383 ME1P48163 572 aa16.82■□□□□ 0.28
SHCBP1-201ENST00000303383 RHBDL3P58872 404 aa16.82■□□□□ 0.28
SHCBP1-201ENST00000303383 STRIP1Q5VSL9 837 aa16.82■□□□□ 0.28
SHCBP1-201ENST00000303383 SLC44A5Q8NCS7 719 aa16.82■□□□□ 0.28
SHCBP1-201ENST00000303383 PPP1R1BQ9UD71 204 aaPredicted RBP16.82■□□□□ 0.28
SHCBP1-201ENST00000303383 LTBP1Q14766 1721 aa16.81■□□□□ 0.28
SHCBP1-201ENST00000303383 USP17L3A6NCW0 530 aa16.81■□□□□ 0.28
SHCBP1-201ENST00000303383 USP17L4A6NCW7 530 aa16.81■□□□□ 0.28
SHCBP1-201ENST00000303383 POLD1P28340 1107 aa16.81■□□□□ 0.28
SHCBP1-201ENST00000303383 CCDC93Q567U6 631 aa16.81■□□□□ 0.28
SHCBP1-201ENST00000303383 USP17L1Q7RTZ2 530 aa16.81■□□□□ 0.28
SHCBP1-201ENST00000303383 CRACR2BQ8N4Y2 399 aaPredicted RBP16.81■□□□□ 0.28
SHCBP1-201ENST00000303383 USP28Q96RU2 1077 aa16.81■□□□□ 0.28
SHCBP1-201ENST00000303383 KIAA1551Q9HCM1 1747 aa16.81■□□□□ 0.28
SHCBP1-201ENST00000303383 KIF5BP33176 963 aa16.81■□□□□ 0.28
SHCBP1-201ENST00000303383 LRSAM1Q6UWE0 723 aa16.81■□□□□ 0.28
SHCBP1-201ENST00000303383 LAMB1P07942 1786 aa16.8■□□□□ 0.28
SHCBP1-201ENST00000303383 ZBTB7AO95365 584 aa16.8■□□□□ 0.28
SHCBP1-201ENST00000303383 CDK8P49336 464 aa16.8■□□□□ 0.28
SHCBP1-201ENST00000303383 KIF23Q02241 960 aaPredicted RBP16.8■□□□□ 0.28
SHCBP1-201ENST00000303383 CCDC125Q86Z20 511 aa16.8■□□□□ 0.28
SHCBP1-201ENST00000303383 KCNQ5Q9NR82 932 aa16.8■□□□□ 0.28
SHCBP1-201ENST00000303383 XRCC6P12956 609 aaKnown RBP eCLIP16.8■□□□□ 0.28
SHCBP1-201ENST00000303383 CRKP46108 304 aa16.8■□□□□ 0.28
SHCBP1-201ENST00000303383 HHIPL2Q6UWX4 724 aa16.8■□□□□ 0.28
SHCBP1-201ENST00000303383 RTKN2Q8IZC4 609 aa16.8■□□□□ 0.28
SHCBP1-201ENST00000303383 KIAA2012Q0VF49 1180 aa16.79■□□□□ 0.28
SHCBP1-201ENST00000303383 GRIPAP1Q4V328 841 aa16.79■□□□□ 0.28
SHCBP1-201ENST00000303383 MYSM1Q5VVJ2 828 aa16.79■□□□□ 0.28
SHCBP1-201ENST00000303383 DGKHQ86XP1 1220 aa16.79■□□□□ 0.28
SHCBP1-201ENST00000303383 RNF26Q9BY78 433 aaPredicted RBP16.79■□□□□ 0.28
SHCBP1-201ENST00000303383 FTOQ9C0B1 505 aaKnown RBP eCLIP16.79■□□□□ 0.28
SHCBP1-201ENST00000303383 NAV1Q8NEY1 1877 aa16.79■□□□□ 0.28
SHCBP1-201ENST00000303383 NID2Q14112 1375 aa16.79■□□□□ 0.28
SHCBP1-201ENST00000303383 HLA-DOAP06340 250 aa16.79■□□□□ 0.28
SHCBP1-201ENST00000303383 DPEP1P16444 411 aa16.79■□□□□ 0.28
SHCBP1-201ENST00000303383 PNMA1Q8ND90 353 aa16.79■□□□□ 0.28
SHCBP1-201ENST00000303383 RGS22Q8NE09 1264 aa16.79■□□□□ 0.28
SHCBP1-201ENST00000303383 TSPY26PQ9H489 355 aa16.79■□□□□ 0.28
SHCBP1-201ENST00000303383 ATF5Q9Y2D1 282 aaPredicted RBP16.79■□□□□ 0.28
SHCBP1-201ENST00000303383 ROBO3Q96MS0 1386 aa16.78■□□□□ 0.28
SHCBP1-201ENST00000303383 TROAPQ12815 778 aa16.78■□□□□ 0.28
SHCBP1-201ENST00000303383 CCDC73Q6ZRK6 1079 aa16.78■□□□□ 0.28
SHCBP1-201ENST00000303383 C16orf86Q6ZW13 317 aa16.78■□□□□ 0.28
SHCBP1-201ENST00000303383 LARGE2Q8N3Y3 721 aa16.78■□□□□ 0.28
SHCBP1-201ENST00000303383 RCOR1Q9UKL0 485 aa16.78■□□□□ 0.28
SHCBP1-201ENST00000303383 V9GY48 417 aaPredicted RBP16.78■□□□□ 0.28
SHCBP1-201ENST00000303383 GUCY1A2P33402 732 aa16.78■□□□□ 0.28
SHCBP1-201ENST00000303383 NASPP49321 788 aaPredicted RBP16.78■□□□□ 0.28
SHCBP1-201ENST00000303383 ZSCAN29Q8IWY8 852 aaPredicted RBP16.78■□□□□ 0.28
SHCBP1-201ENST00000303383 C7orf43Q8WVR3 580 aa16.78■□□□□ 0.28
SHCBP1-201ENST00000303383 PIBF1Q8WXW3 757 aa16.78■□□□□ 0.28
SHCBP1-201ENST00000303383 NUP62CLQ9H1M0 184 aa16.78■□□□□ 0.28
SHCBP1-201ENST00000303383 QSER1Q2KHR3 1735 aa16.77■□□□□ 0.28
SHCBP1-201ENST00000303383 UBE2Q2LH0YL09 131 aa16.77■□□□□ 0.28
SHCBP1-201ENST00000303383 PLEKHA8P1O95397 391 aa16.77■□□□□ 0.28
SHCBP1-201ENST00000303383 RASA1P20936 1047 aa16.77■□□□□ 0.28
SHCBP1-201ENST00000303383 TRIM34Q9BYJ4 488 aa16.77■□□□□ 0.28
SHCBP1-201ENST00000303383 BRMS1Q9HCU9 246 aa16.77■□□□□ 0.28
SHCBP1-201ENST00000303383 KCNJ14Q9UNX9 436 aa16.77■□□□□ 0.28
SHCBP1-201ENST00000303383 DACT2Q5SW24 774 aa16.77■□□□□ 0.27
SHCBP1-201ENST00000303383 CDC42EP5Q6NZY7 148 aa16.77■□□□□ 0.27
SHCBP1-201ENST00000303383 DACT1Q9NYF0 836 aa16.77■□□□□ 0.27
SHCBP1-201ENST00000303383 C10orf71Q711Q0 1435 aa16.77■□□□□ 0.27
SHCBP1-201ENST00000303383 A0A0U1RQG5 324 aaPredicted RBP16.76■□□□□ 0.27
SHCBP1-201ENST00000303383 hCG_1642624A0A1W2PR95 340 aa16.76■□□□□ 0.27
SHCBP1-201ENST00000303383 KIF28PB7ZC32 967 aa16.76■□□□□ 0.27
SHCBP1-201ENST00000303383 KCNG4Q8TDN1 519 aa16.76■□□□□ 0.27
SHCBP1-201ENST00000303383 RTEL1Q9NZ71 1219 aa16.76■□□□□ 0.27
SHCBP1-201ENST00000303383 LIG1P18858 919 aa16.76■□□□□ 0.27
SHCBP1-201ENST00000303383 FKBP1AP62942 108 aaKnown RBP16.76■□□□□ 0.27
SHCBP1-201ENST00000303383 TMTC3Q6ZXV5 915 aa16.76■□□□□ 0.27
SHCBP1-201ENST00000303383 ILDR1Q86SU0 546 aaPredicted RBP16.76■□□□□ 0.27
SHCBP1-201ENST00000303383 DIS3L2Q8IYB7 885 aaKnown RBP16.76■□□□□ 0.27
SHCBP1-201ENST00000303383 DDX19AQ9NUU7 478 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms