RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 TAF1P21675 1872 aa14.8□□□□□ -0.04
HIF3A-204ENST00000300862 NPHP1O15259 732 aa14.8□□□□□ -0.04
HIF3A-204ENST00000300862 PTPREP23469 700 aa14.8□□□□□ -0.04
HIF3A-204ENST00000300862 SEC23AQ15436 765 aa14.8□□□□□ -0.04
HIF3A-204ENST00000300862 ANKRD18AQ8IVF6 992 aa14.8□□□□□ -0.04
HIF3A-204ENST00000300862 ENAHQ8N8S7 591 aaPredicted RBP14.8□□□□□ -0.04
HIF3A-204ENST00000300862 FOXP1Q9H334 677 aaPredicted RBP14.8□□□□□ -0.04
HIF3A-204ENST00000300862 MAN1B1Q9UKM7 699 aa14.8□□□□□ -0.04
HIF3A-204ENST00000300862 SPATA31A1Q5TZJ5 1347 aa14.79□□□□□ -0.04
HIF3A-204ENST00000300862 PLEKHA8P1O95397 391 aa14.79□□□□□ -0.04
HIF3A-204ENST00000300862 FMR1Q06787 632 aaKnown RBP eCLIP14.79□□□□□ -0.04
HIF3A-204ENST00000300862 POSTNQ15063 836 aa14.79□□□□□ -0.04
HIF3A-204ENST00000300862 RILPL1Q5EBL4 403 aa14.79□□□□□ -0.04
HIF3A-204ENST00000300862 SYT10Q6XYQ8 523 aa14.79□□□□□ -0.04
HIF3A-204ENST00000300862 KIF18AQ8NI77 898 aa14.79□□□□□ -0.04
HIF3A-204ENST00000300862 ZNF384Q8TF68 577 aa14.79□□□□□ -0.04
HIF3A-204ENST00000300862 ESR2Q92731 530 aa14.79□□□□□ -0.04
HIF3A-204ENST00000300862 CDC5LQ99459 802 aaKnown RBP14.79□□□□□ -0.04
HIF3A-204ENST00000300862 CGNQ9P2M7 1197 aaKnown RBP14.79□□□□□ -0.04
HIF3A-204ENST00000300862 JAG2Q9Y219 1238 aa14.79□□□□□ -0.04
HIF3A-204ENST00000300862 ARAP2Q8WZ64 1704 aa14.79□□□□□ -0.04
HIF3A-204ENST00000300862 COL14A1Q05707 1796 aaKnown RBP14.79□□□□□ -0.04
HIF3A-204ENST00000300862 DOCK2Q92608 1830 aa14.79□□□□□ -0.04
HIF3A-204ENST00000300862 COL1A1P02452 1464 aaPredicted RBP14.79□□□□□ -0.04
HIF3A-204ENST00000300862 CCDC196A0A1B0GTZ2 297 aa14.79□□□□□ -0.04
HIF3A-204ENST00000300862 SLC4A8Q2Y0W8 1093 aa14.79□□□□□ -0.04
HIF3A-204ENST00000300862 NOM1Q5C9Z4 860 aaKnown RBP14.79□□□□□ -0.04
HIF3A-204ENST00000300862 TMTC2Q8N394 836 aa14.79□□□□□ -0.04
HIF3A-204ENST00000300862 RIOK1Q9BRS2 568 aaKnown RBP14.79□□□□□ -0.04
HIF3A-204ENST00000300862 CSRNP2Q9H175 543 aa14.79□□□□□ -0.04
HIF3A-204ENST00000300862 V9GY48 417 aaPredicted RBP14.79□□□□□ -0.04
HIF3A-204ENST00000300862 WNT7AO00755 349 aa14.78□□□□□ -0.04
HIF3A-204ENST00000300862 CELF1Q92879 486 aaKnown RBP14.78□□□□□ -0.04
HIF3A-204ENST00000300862 INTS13Q9NVM9 706 aa14.78□□□□□ -0.04
HIF3A-204ENST00000300862 NMT2O60551 498 aa14.78□□□□□ -0.04
HIF3A-204ENST00000300862 GTF2E1P29083 439 aaPredicted RBP14.78□□□□□ -0.04
HIF3A-204ENST00000300862 CASP1P29466 404 aa14.78□□□□□ -0.04
HIF3A-204ENST00000300862 AKAP17AQ02040 695 aaKnown RBP14.78□□□□□ -0.04
HIF3A-204ENST00000300862 MINPP1Q9UNW1 487 aa14.78□□□□□ -0.04
HIF3A-204ENST00000300862 ZNF804BA4D1E1 1349 aa14.77□□□□□ -0.04
HIF3A-204ENST00000300862 GABPB1Q06547 395 aaPredicted RBP14.77□□□□□ -0.04
HIF3A-204ENST00000300862 PKN1Q16512 942 aa14.77□□□□□ -0.04
HIF3A-204ENST00000300862 ZNF771Q7L3S4 317 aaPredicted RBP14.77□□□□□ -0.04
HIF3A-204ENST00000300862 FAM84BQ96KN1 310 aaPredicted RBP14.77□□□□□ -0.04
HIF3A-204ENST00000300862 ZSCAN10Q96SZ4 725 aaPredicted RBP14.77□□□□□ -0.04
HIF3A-204ENST00000300862 COL16A1Q07092 1604 aaPredicted RBP14.77□□□□□ -0.05
HIF3A-204ENST00000300862 BCL9LQ86UU0 1499 aa14.77□□□□□ -0.05
HIF3A-204ENST00000300862 NID2Q14112 1375 aa14.77□□□□□ -0.05
HIF3A-204ENST00000300862 IFIT1BQ5T764 474 aaKnown RBP14.77□□□□□ -0.05
HIF3A-204ENST00000300862 LRRN4CLQ8ND94 238 aa14.77□□□□□ -0.05
HIF3A-204ENST00000300862 DHX58Q96C10 678 aa14.77□□□□□ -0.05
HIF3A-204ENST00000300862 EPSTI1Q96J88 318 aa14.77□□□□□ -0.05
HIF3A-204ENST00000300862 GNL3LQ9NVN8 582 aaKnown RBP14.77□□□□□ -0.05
HIF3A-204ENST00000300862 TFCP2L1Q9NZI6 479 aa14.77□□□□□ -0.05
HIF3A-204ENST00000300862 NFE2L3Q9Y4A8 694 aa14.77□□□□□ -0.05
HIF3A-204ENST00000300862 MORC2Q9Y6X9 1032 aaPredicted RBP14.77□□□□□ -0.05
HIF3A-204ENST00000300862 MYH2Q9UKX2 1941 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 A0A087X0B3 334 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 USP17L12C9JPN9 530 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 USP17L21D6R901 530 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 TOP1P11387 765 aaKnown RBP14.76□□□□□ -0.05
HIF3A-204ENST00000300862 CAVIN4Q5BKX8 364 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 HOMER1Q86YM7 354 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 TIAM2Q8IVF5 1701 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 BAZ2AQ9UIF9 1905 aaKnown RBP14.76□□□□□ -0.05
HIF3A-204ENST00000300862 RTL9Q8NET4 1388 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 SLFN14P0C7P3 912 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 AFMP43652 599 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 ELF2Q15723 593 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 VSTM4Q8IW00 320 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 LINC00116Q8NCU8 138 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 SMARCE1Q969G3 411 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 MED15Q96RN5 788 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 KCND1Q9NSA2 647 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 ZNF652Q9Y2D9 606 aa14.76□□□□□ -0.05
HIF3A-204ENST00000300862 SRPRBQ9Y5M8 271 aaKnown RBP14.76□□□□□ -0.05
HIF3A-204ENST00000300862 CBFA2T2O43439 604 aa14.75□□□□□ -0.05
HIF3A-204ENST00000300862 ACTN4O43707 911 aaKnown RBP14.75□□□□□ -0.05
HIF3A-204ENST00000300862 CDK11BP21127 795 aaKnown RBP14.75□□□□□ -0.05
HIF3A-204ENST00000300862 FAM47AQ5JRC9 791 aa14.75□□□□□ -0.05
HIF3A-204ENST00000300862 CTR9Q6PD62 1173 aa14.75□□□□□ -0.05
HIF3A-204ENST00000300862 PTF1AQ7RTS3 328 aa14.75□□□□□ -0.05
HIF3A-204ENST00000300862 RNF26Q9BY78 433 aaPredicted RBP14.75□□□□□ -0.05
HIF3A-204ENST00000300862 SAMSN1Q9NSI8 373 aaKnown RBP14.75□□□□□ -0.05
HIF3A-204ENST00000300862 AATFQ9NY61 560 aaKnown RBP eCLIP14.75□□□□□ -0.05
HIF3A-204ENST00000300862 BCORQ6W2J9 1755 aa14.75□□□□□ -0.05
HIF3A-204ENST00000300862 FUT2Q10981 343 aa14.75□□□□□ -0.05
HIF3A-204ENST00000300862 ZNF174Q15697 407 aa14.75□□□□□ -0.05
HIF3A-204ENST00000300862 KMT5BQ4FZB7 885 aa14.75□□□□□ -0.05
HIF3A-204ENST00000300862 CATIPQ7Z7H3 387 aa14.75□□□□□ -0.05
HIF3A-204ENST00000300862 BSDC1Q9NW68 430 aaPredicted RBP14.75□□□□□ -0.05
HIF3A-204ENST00000300862 HOOK1Q9UJC3 728 aaKnown RBP14.75□□□□□ -0.05
HIF3A-204ENST00000300862 ANAPC4Q9UJX5 808 aa14.75□□□□□ -0.05
HIF3A-204ENST00000300862 CICQ96RK0 1608 aaPredicted RBP14.74□□□□□ -0.05
HIF3A-204ENST00000300862 PSDA5PKW4 1024 aaPredicted RBP14.74□□□□□ -0.05
HIF3A-204ENST00000300862 TRIM75PA6NK02 468 aa14.74□□□□□ -0.05
HIF3A-204ENST00000300862 NRDCO43847 1150 aa14.74□□□□□ -0.05
HIF3A-204ENST00000300862 CYP2D6P10635 497 aa14.74□□□□□ -0.05
HIF3A-204ENST00000300862 VEGFAP15692 232 aaPredicted RBP14.74□□□□□ -0.05
HIF3A-204ENST00000300862 UBE4AQ14139 1066 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms