RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 RIMBP3Q9UFD9 1639 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 SHTN1A0MZ66 631 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 B4E1Z4 1266 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 METTL22Q9BUU2 404 aaPredicted RBP12.42□□□□□ -0.42
SNX20-201ENST00000300590 PUS7LQ9H0K6 701 aaKnown RBP12.42□□□□□ -0.42
SNX20-201ENST00000300590 TAB2Q9NYJ8 693 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 GOLGA6BA6NDN3 693 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 ATP1A1P05023 1023 aaKnown RBP12.41□□□□□ -0.42
SNX20-201ENST00000300590 ATP1A2P50993 1020 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 USP14P54578 494 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 ATP2B2Q01814 1243 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 NR5A1Q13285 461 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 MORC3Q14149 939 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 MAP9Q49MG5 647 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 SUGP1Q8IWZ8 645 aaKnown RBP12.41□□□□□ -0.42
SNX20-201ENST00000300590 MB21D2Q8IYB1 491 aaPredicted RBP12.41□□□□□ -0.42
SNX20-201ENST00000300590 CTCFLQ8NI51 663 aaPredicted RBP12.41□□□□□ -0.42
SNX20-201ENST00000300590 COG1Q8WTW3 980 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 PCDHB6Q9Y5E3 794 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 UTYO14607 1347 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 SYNRGQ9UMZ2 1314 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 ATP6V1AP38606 617 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 PLCD1P51178 756 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 KCTD16Q68DU8 428 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 SND1Q7KZF4 910 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNX20-201ENST00000300590 EEF2KMTQ96G04 330 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 PSMB7Q99436 277 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 SELENOOQ9BVL4 669 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 CAPS2Q9BXY5 557 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 PUS3Q9BZE2 481 aaKnown RBP12.41□□□□□ -0.42
SNX20-201ENST00000300590 NBPF3Q9H094 633 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 FAM107BQ9H098 131 aa12.41□□□□□ -0.42
SNX20-201ENST00000300590 GOLGA8AA7E2F4 631 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 MYO1BO43795 1136 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 ECM2O94769 699 aaPredicted RBP12.4□□□□□ -0.42
SNX20-201ENST00000300590 LTKP29376 864 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 KCNV1Q6PIU1 500 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 CNGA4Q8IV77 575 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 JADE2Q9NQC1 790 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 GNL3LQ9NVN8 582 aaKnown RBP12.4□□□□□ -0.42
SNX20-201ENST00000300590 ADD3Q9UEY8 706 aaKnown RBP12.4□□□□□ -0.42
SNX20-201ENST00000300590 GUCY1A2P33402 732 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 ARHGAP25P42331 645 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 CCDC122Q5T0U0 273 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 CYB5R4Q7L1T6 521 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 DIS3L2Q8IYB7 885 aaKnown RBP12.4□□□□□ -0.42
SNX20-201ENST00000300590 EPSTI1Q96J88 318 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 NAA15Q9BXJ9 866 aaKnown RBP12.4□□□□□ -0.42
SNX20-201ENST00000300590 CTNND2Q9UQB3 1225 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 NDUFAB1O14561 156 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 C2orf54Q08AI8 447 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 SAFBQ15424 915 aaKnown RBP eCLIP12.4□□□□□ -0.42
SNX20-201ENST00000300590 RRP12Q5JTH9 1297 aaKnown RBP12.4□□□□□ -0.42
SNX20-201ENST00000300590 RNF187Q5TA31 235 aaPredicted RBP12.4□□□□□ -0.42
SNX20-201ENST00000300590 CSRNP2Q9H175 543 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 SUFUQ9UMX1 484 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 ANGEL1Q9UNK9 670 aaKnown RBP12.4□□□□□ -0.42
SNX20-201ENST00000300590 SAR1BQ9Y6B6 198 aa12.4□□□□□ -0.42
SNX20-201ENST00000300590 ZBTB43O43298 467 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 SETQ01105 290 aaPredicted RBP12.39□□□□□ -0.43
SNX20-201ENST00000300590 PDCLQ13371 301 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 SPATA1Q5VX52 437 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 TMTC1Q8IUR5 882 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 CEP89Q96ST8 783 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 BLZF1Q9H2G9 400 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 AKAP12Q02952 1782 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 ADORA1P30542 326 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 SLC7A5Q01650 507 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 RRP36Q96EU6 259 aaKnown RBP12.39□□□□□ -0.43
SNX20-201ENST00000300590 ZKSCAN3Q9BRR0 538 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 AGPSO00116 658 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 FOXP2O15409 715 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 TOB1P50616 345 aaPredicted RBP12.39□□□□□ -0.43
SNX20-201ENST00000300590 PPARAQ07869 468 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 TUBB2AQ13885 445 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 EZH2Q15910 746 aaKnown RBP12.39□□□□□ -0.43
SNX20-201ENST00000300590 WDR93Q6P2C0 686 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 APOA5Q6Q788 366 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 KIAA1328Q86T90 577 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 ANKRD18AQ8IVF6 992 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 NOSTRINQ8IVI9 506 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 OTUD6BQ8N6M0 293 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 AIDAQ96BJ3 306 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 TUBB2BQ9BVA1 445 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 CD248Q9HCU0 757 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 CABP5Q9NP86 173 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 ABHD10Q9NUJ1 306 aa12.39□□□□□ -0.43
SNX20-201ENST00000300590 EPN1Q9Y6I3 576 aaPredicted RBP12.39□□□□□ -0.43
SNX20-201ENST00000300590 MACROD2A1Z1Q3 448 aa12.38□□□□□ -0.43
SNX20-201ENST00000300590 GPAA1O43292 621 aa12.38□□□□□ -0.43
SNX20-201ENST00000300590 RANBP6O60518 1105 aaKnown RBP12.38□□□□□ -0.43
SNX20-201ENST00000300590 CDKL5O76039 1030 aa12.38□□□□□ -0.43
SNX20-201ENST00000300590 KIAA0754O94854 1291 aa12.38□□□□□ -0.43
SNX20-201ENST00000300590 CPP00450 1065 aa12.38□□□□□ -0.43
SNX20-201ENST00000300590 SCARF1Q14162 830 aa12.38□□□□□ -0.43
SNX20-201ENST00000300590 CYP26C1Q6V0L0 522 aa12.38□□□□□ -0.43
SNX20-201ENST00000300590 GBP6Q6ZN66 633 aa12.38□□□□□ -0.43
SNX20-201ENST00000300590 APTXQ7Z2E3 356 aaKnown RBP12.38□□□□□ -0.43
SNX20-201ENST00000300590 hCG_1642624A0A1W2PR95 340 aa12.38□□□□□ -0.43
SNX20-201ENST00000300590 AMPD2Q01433 879 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms