RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CCDC117Q8IWD4 279 aaPredicted RBP15.11■□□□□ 0.01
CHRFAM7A-201ENST00000299847 CCDC110Q8TBZ0 833 aa15.11■□□□□ 0.01
CHRFAM7A-201ENST00000299847 TAB3Q8N5C8 712 aaPredicted RBP15.11■□□□□ 0.01
CHRFAM7A-201ENST00000299847 GPR161Q8N6U8 529 aaKnown RBP15.11■□□□□ 0.01
CHRFAM7A-201ENST00000299847 OGFRQ9NZT2 677 aa15.11■□□□□ 0.01
CHRFAM7A-201ENST00000299847 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.11■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ZNF608Q9ULD9 1512 aaPredicted RBP15.11■□□□□ 0.01
CHRFAM7A-201ENST00000299847 GPATCH8Q9UKJ3 1502 aaKnown RBP15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 NLRP12P59046 1061 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 CLUL1Q15846 466 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 LIN9Q5TKA1 542 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 NSMFQ6X4W1 530 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 CABP7Q86V35 215 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 SPATA5Q8NB90 893 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 KIAA1524Q8TCG1 905 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 FAM207AQ9NSI2 230 aaPredicted RBP15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 PDE8AO60658 829 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ALDH3A1P30838 453 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 FAM98CQ17RN3 349 aaKnown RBP15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 NLRC4Q9NPP4 1024 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 RRAGDQ9NQL2 400 aaPredicted RBP15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 STIM2Q9P246 746 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 LRWD1Q9UFC0 647 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 LACTBP83111 547 aaPredicted RBP15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 POSTNQ15063 836 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 TPH2Q8IWU9 490 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 NOX5Q96PH1 765 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 DDX21Q9NR30 783 aaKnown RBP eCLIP15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 MAN1A1P33908 653 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ARHGEF2Q92974 986 aaKnown RBP15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 POLR3AO14802 1390 aaPredicted RBP15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 UBL4BQ8N7F7 174 aa15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ZNF526Q8TF50 670 aaPredicted RBP15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 YTHDC2Q9H6S0 1430 aaKnown RBP15.1■□□□□ 0.01
CHRFAM7A-201ENST00000299847 HMGXB3Q12766 1538 aa15.09■□□□□ 0.01
CHRFAM7A-201ENST00000299847 GMNNO75496 209 aa15.09■□□□□ 0.01
CHRFAM7A-201ENST00000299847 TMEM87BQ96K49 555 aa15.09■□□□□ 0.01
CHRFAM7A-201ENST00000299847 GOLGA6CA6NDK9 693 aa15.09■□□□□ 0.01
CHRFAM7A-201ENST00000299847 GOLGA6DP0CG33 693 aa15.09■□□□□ 0.01
CHRFAM7A-201ENST00000299847 KCNA6P17658 529 aa15.09■□□□□ 0.01
CHRFAM7A-201ENST00000299847 SLC1A4P43007 532 aa15.09■□□□□ 0.01
CHRFAM7A-201ENST00000299847 HAUS3Q68CZ6 603 aa15.09■□□□□ 0.01
CHRFAM7A-201ENST00000299847 IP6K1Q92551 441 aa15.09■□□□□ 0.01
CHRFAM7A-201ENST00000299847 GOLGA6AQ9NYA3 693 aa15.09■□□□□ 0.01
CHRFAM7A-201ENST00000299847 FYB2Q5VWT5 728 aa15.09■□□□□ 0.01
CHRFAM7A-201ENST00000299847 EXOC3O60645 756 aa15.09■□□□□ 0.01
CHRFAM7A-201ENST00000299847 DPP8Q6V1X1 898 aaPredicted RBP15.09■□□□□ 0.01
CHRFAM7A-201ENST00000299847 CAPN12Q6ZSI9 719 aa15.09■□□□□ 0.01
CHRFAM7A-201ENST00000299847 APPBP2Q92624 585 aa15.09■□□□□ 0.01
CHRFAM7A-201ENST00000299847 SERTAD1Q9UHV2 236 aa15.09■□□□□ 0.01
CHRFAM7A-201ENST00000299847 CD19P15391 556 aa15.08■□□□□ 0.01
CHRFAM7A-201ENST00000299847 GUCY2FP51841 1108 aa15.08■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ATP11AP98196 1134 aa15.08■□□□□ 0.01
CHRFAM7A-201ENST00000299847 KRT40Q6A162 431 aa15.08■□□□□ 0.01
CHRFAM7A-201ENST00000299847 DCUN1D2Q6PH85 259 aa15.08■□□□□ 0.01
CHRFAM7A-201ENST00000299847 NACA2Q9H009 215 aa15.08■□□□□ 0.01
CHRFAM7A-201ENST00000299847 MAPKBP1O60336 1514 aa15.08■□□□□ 0.01
CHRFAM7A-201ENST00000299847 CETN3O15182 167 aa15.08■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ADAT2Q7Z6V5 191 aaKnown RBP15.08■□□□□ 0.01
CHRFAM7A-201ENST00000299847 TBC1D8O95759 1140 aa15.08■□□□□ 0
CHRFAM7A-201ENST00000299847 LSM14BQ9BX40 385 aaKnown RBP15.08■□□□□ 0
CHRFAM7A-201ENST00000299847 GPHNQ9NQX3 736 aaPredicted RBP15.08■□□□□ 0
CHRFAM7A-201ENST00000299847 CUTAO60888 179 aa15.08■□□□□ 0
CHRFAM7A-201ENST00000299847 SLC8A3P57103 927 aa15.08■□□□□ 0
CHRFAM7A-201ENST00000299847 RRAGAQ7L523 313 aa15.08■□□□□ 0
CHRFAM7A-201ENST00000299847 ANKRD42Q8N9B4 389 aa15.08■□□□□ 0
CHRFAM7A-201ENST00000299847 PPP1R12CQ9BZL4 782 aa15.08■□□□□ 0
CHRFAM7A-201ENST00000299847 NDUFAB1O14561 156 aa15.08■□□□□ 0
CHRFAM7A-201ENST00000299847 CYP2J2P51589 502 aa15.08■□□□□ 0
CHRFAM7A-201ENST00000299847 CCDC105Q8IYK2 499 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 TSC1Q92574 1164 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 ERO1AQ96HE7 468 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 SH2D4AQ9H788 454 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 DNM3Q9UQ16 869 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 NFE2L3Q9Y4A8 694 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 NEDD9Q14511 834 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 NAP1L4Q99733 375 aaKnown RBP15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 ABCB4P21439 1286 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 IFRD2Q12894 506 aaPredicted RBP15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 NONOQ15233 471 aaKnown RBP eCLIP15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 VWA3BQ502W6 1294 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 LARGE2Q8N3Y3 721 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 UBE2Q2Q8WVN8 375 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 TTF2Q9UNY4 1162 aaKnown RBP15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 DUOX2Q9NRD8 1548 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 BUB1BO60566 1050 aaPredicted RBP15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 KLHL30Q0D2K2 578 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 FAM102BQ5T8I3 360 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 GBP6Q6ZN66 633 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 PCDHB13Q9Y5F0 798 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 RAPGEF6Q8TEU7 1601 aa15.07■□□□□ 0
CHRFAM7A-201ENST00000299847 TTC36A6NLP5 189 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 E7EWF7 191 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 BUB1O43683 1085 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 ARID4AP29374 1257 aaPredicted RBP15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 ATP5DP30049 168 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 TFAP4Q01664 338 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 ORAI2Q96SN7 254 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 PRPF6O94906 941 aaKnown RBP15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 PCK1P35558 622 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms