RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 GNL3LQ9NVN8 582 aaKnown RBP7.19□□□□□ -1.26
SSX3-201ENST00000298396 GPRC5DQ9NZD1 345 aa7.19□□□□□ -1.26
SSX3-201ENST00000298396 ATAD5Q96QE3 1844 aa7.19□□□□□ -1.26
SSX3-201ENST00000298396 ASTN2O75129 1339 aaPredicted RBP7.19□□□□□ -1.26
SSX3-201ENST00000298396 TCRBV5S4A2TA0A5A2 114 aa7.18□□□□□ -1.26
SSX3-201ENST00000298396 GOLIM4O00461 696 aa7.18□□□□□ -1.26
SSX3-201ENST00000298396 FRAT2O75474 233 aaPredicted RBP7.18□□□□□ -1.26
SSX3-201ENST00000298396 F12P00748 615 aaPredicted RBP7.18□□□□□ -1.26
SSX3-201ENST00000298396 RPS12P25398 132 aaKnown RBP7.18□□□□□ -1.26
SSX3-201ENST00000298396 MECOMQ03112 1051 aa7.18□□□□□ -1.26
SSX3-201ENST00000298396 ZNF784Q8NCA9 323 aaPredicted RBP7.18□□□□□ -1.26
SSX3-201ENST00000298396 MTMR14Q8NCE2 650 aa7.18□□□□□ -1.26
SSX3-201ENST00000298396 WDR66Q8TBY9 1149 aa7.18□□□□□ -1.26
SSX3-201ENST00000298396 ZNF526Q8TF50 670 aaPredicted RBP7.18□□□□□ -1.26
SSX3-201ENST00000298396 TBC1D22AQ8WUA7 517 aa7.18□□□□□ -1.26
SSX3-201ENST00000298396 DPF2Q92785 391 aa7.18□□□□□ -1.26
SSX3-201ENST00000298396 NSUN4Q96CB9 384 aaKnown RBP7.18□□□□□ -1.26
SSX3-201ENST00000298396 DNAJC2Q99543 621 aaKnown RBP7.18□□□□□ -1.26
SSX3-201ENST00000298396 RRAGCQ9HB90 399 aa7.18□□□□□ -1.26
SSX3-201ENST00000298396 PRDM9Q9NQV7 894 aa7.18□□□□□ -1.26
SSX3-201ENST00000298396 PAG1Q9NWQ8 432 aa7.18□□□□□ -1.26
SSX3-201ENST00000298396 CNOT7Q9UIV1 285 aaKnown RBP7.18□□□□□ -1.26
SSX3-201ENST00000298396 RFX7Q2KHR2 1363 aa7.18□□□□□ -1.26
SSX3-201ENST00000298396 GLRX3O76003 335 aaKnown RBP7.17□□□□□ -1.26
SSX3-201ENST00000298396 YY1P25490 414 aa7.17□□□□□ -1.26
SSX3-201ENST00000298396 TBC1D10BQ4KMP7 808 aaPredicted RBP7.17□□□□□ -1.26
SSX3-201ENST00000298396 TTC22Q5TAA0 569 aa7.17□□□□□ -1.26
SSX3-201ENST00000298396 SLC6A16Q9GZN6 736 aa7.17□□□□□ -1.26
SSX3-201ENST00000298396 TAF1DQ9H5J8 278 aaPredicted RBP7.17□□□□□ -1.26
SSX3-201ENST00000298396 ABCF2Q9UG63 623 aa7.17□□□□□ -1.26
SSX3-201ENST00000298396 HACL1Q9UJ83 578 aa7.17□□□□□ -1.26
SSX3-201ENST00000298396 TTF2Q9UNY4 1162 aaKnown RBP7.17□□□□□ -1.26
SSX3-201ENST00000298396 DAGLAQ9Y4D2 1042 aa7.17□□□□□ -1.26
SSX3-201ENST00000298396 GAKO14976 1311 aa7.17□□□□□ -1.26
SSX3-201ENST00000298396 MYO3BQ8WXR4 1341 aa7.17□□□□□ -1.26
SSX3-201ENST00000298396 PHIPQ8WWQ0 1821 aa7.17□□□□□ -1.26
SSX3-201ENST00000298396 WNT10BO00744 389 aa7.16□□□□□ -1.26
SSX3-201ENST00000298396 GPR37L1O60883 481 aa7.16□□□□□ -1.26
SSX3-201ENST00000298396 AP1G2O75843 785 aa7.16□□□□□ -1.26
SSX3-201ENST00000298396 LDHBP07195 334 aaKnown RBP7.16□□□□□ -1.26
SSX3-201ENST00000298396 PDE6AP16499 860 aa7.16□□□□□ -1.26
SSX3-201ENST00000298396 EPHX2P34913 555 aa7.16□□□□□ -1.26
SSX3-201ENST00000298396 CRKP46108 304 aa7.16□□□□□ -1.26
SSX3-201ENST00000298396 CTDSPL2Q05D32 466 aa7.16□□□□□ -1.26
SSX3-201ENST00000298396 NBPF9Q3BBW0 867 aa7.16□□□□□ -1.26
SSX3-201ENST00000298396 CFAP100Q494V2 611 aa7.16□□□□□ -1.26
SSX3-201ENST00000298396 APOBEC3HQ6NTF7 200 aaKnown RBP7.16□□□□□ -1.26
SSX3-201ENST00000298396 ERICH6Q7L0X2 663 aa7.16□□□□□ -1.26
SSX3-201ENST00000298396 GPATCH3Q96I76 525 aa7.16□□□□□ -1.26
SSX3-201ENST00000298396 PRMT6Q96LA8 375 aaPredicted RBP7.16□□□□□ -1.26
SSX3-201ENST00000298396 TRIM34Q9BYJ4 488 aa7.16□□□□□ -1.26
SSX3-201ENST00000298396 MYOZ2Q9NPC6 264 aa7.16□□□□□ -1.26
SSX3-201ENST00000298396 SCAF8Q9UPN6 1271 aaKnown RBP7.16□□□□□ -1.26
SSX3-201ENST00000298396 SUGT1Q9Y2Z0 365 aa7.16□□□□□ -1.26
SSX3-201ENST00000298396 PTPRFP10586 1907 aa7.16□□□□□ -1.26
SSX3-201ENST00000298396 MROH7-TTC4A0A0A0MT08 1334 aa7.16□□□□□ -1.26
SSX3-201ENST00000298396 ERC2O15083 957 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 IDH1O75874 414 aaKnown RBP7.15□□□□□ -1.26
SSX3-201ENST00000298396 S1PR4O95977 384 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 SDSP20132 328 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 ADD2P35612 726 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 RGS3P49796 1198 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 RHBDL3P58872 404 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 HDLBPQ00341 1268 aaKnown RBP7.15□□□□□ -1.26
SSX3-201ENST00000298396 KIF4BQ2VIQ3 1234 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 HHIPL2Q6UWX4 724 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 DLK2Q6UY11 383 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 MAGEB6Q8N7X4 407 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 KBTBD3Q8NAB2 608 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 ZDHHC15Q96MV8 337 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 MRIQ9BWK5 157 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 IL25Q9H293 177 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 ADARB2Q9NS39 739 aaKnown RBP7.15□□□□□ -1.26
SSX3-201ENST00000298396 RAI14Q9P0K7 980 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 SERPINA10Q9UK55 444 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 ZNF532Q9HCE3 1301 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 CNTNAP1P78357 1384 aa7.15□□□□□ -1.26
SSX3-201ENST00000298396 SSC5DA1L4H1 1573 aa7.15□□□□□ -1.27
SSX3-201ENST00000298396 GREB1LQ9C091 1923 aaPredicted RBP7.15□□□□□ -1.27
SSX3-201ENST00000298396 GPR75-ASB3A0A0A6YYF3 556 aa7.14□□□□□ -1.27
SSX3-201ENST00000298396 H7C1D1 291 aa7.14□□□□□ -1.27
SSX3-201ENST00000298396 M0R2C6 588 aa7.14□□□□□ -1.27
SSX3-201ENST00000298396 FOXP2O15409 715 aa7.14□□□□□ -1.27
SSX3-201ENST00000298396 MAST3O60307 1309 aa7.14□□□□□ -1.27
SSX3-201ENST00000298396 VEGFAP15692 232 aaPredicted RBP7.14□□□□□ -1.27
SSX3-201ENST00000298396 LMOD1P29536 600 aaPredicted RBP7.14□□□□□ -1.27
SSX3-201ENST00000298396 CACNB3P54284 484 aa7.14□□□□□ -1.27
SSX3-201ENST00000298396 DYNLL1P63167 89 aaKnown RBP7.14□□□□□ -1.27
SSX3-201ENST00000298396 FMR1Q06787 632 aaKnown RBP eCLIP7.14□□□□□ -1.27
SSX3-201ENST00000298396 DOCK1Q14185 1865 aa7.14□□□□□ -1.27
SSX3-201ENST00000298396 SPTY2D1Q68D10 685 aaPredicted RBP7.14□□□□□ -1.27
SSX3-201ENST00000298396 CDC42EP5Q6NZY7 148 aa7.14□□□□□ -1.27
SSX3-201ENST00000298396 DZIP1Q86YF9 867 aaKnown RBP7.14□□□□□ -1.27
SSX3-201ENST00000298396 ZGPATQ8N5A5 531 aaKnown RBP7.14□□□□□ -1.27
SSX3-201ENST00000298396 OSBP2Q969R2 916 aa7.14□□□□□ -1.27
SSX3-201ENST00000298396 TEKT1Q969V4 418 aa7.14□□□□□ -1.27
SSX3-201ENST00000298396 SEC62Q99442 399 aaKnown RBP7.14□□□□□ -1.27
SSX3-201ENST00000298396 RIOK1Q9BRS2 568 aaKnown RBP7.14□□□□□ -1.27
SSX3-201ENST00000298396 PUS7LQ9H0K6 701 aaKnown RBP7.14□□□□□ -1.27
SSX3-201ENST00000298396 TDRD3Q9H7E2 651 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms