RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 KLHL34Q8N239 644 aa15.79■□□□□ 0.12
CHMP4C-201ENST00000297265 TSPY26PQ9H489 355 aa15.79■□□□□ 0.12
CHMP4C-201ENST00000297265 POLR3EQ9NVU0 708 aa15.79■□□□□ 0.12
CHMP4C-201ENST00000297265 SUGT1Q9Y2Z0 365 aa15.79■□□□□ 0.12
CHMP4C-201ENST00000297265 SLC44A5Q8NCS7 719 aa15.78■□□□□ 0.12
CHMP4C-201ENST00000297265 STK32BQ9NY57 414 aa15.78■□□□□ 0.12
CHMP4C-201ENST00000297265 FLT1P17948 1338 aa15.78■□□□□ 0.12
CHMP4C-201ENST00000297265 ZNF646O15015 1829 aaPredicted RBP15.78■□□□□ 0.12
CHMP4C-201ENST00000297265 PLEKHA8P1O95397 391 aa15.78■□□□□ 0.12
CHMP4C-201ENST00000297265 TFAP4Q01664 338 aa15.78■□□□□ 0.12
CHMP4C-201ENST00000297265 SNW1Q13573 536 aaKnown RBP15.78■□□□□ 0.12
CHMP4C-201ENST00000297265 RBM43Q6ZSC3 357 aaKnown RBP15.78■□□□□ 0.12
CHMP4C-201ENST00000297265 ENGASEQ8NFI3 743 aa15.78■□□□□ 0.12
CHMP4C-201ENST00000297265 ANKS1AQ92625 1134 aa15.78■□□□□ 0.12
CHMP4C-201ENST00000297265 NOL10Q9BSC4 688 aaKnown RBP15.78■□□□□ 0.12
CHMP4C-201ENST00000297265 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.78■□□□□ 0.12
CHMP4C-201ENST00000297265 GOLPH3LQ9H4A5 285 aa15.78■□□□□ 0.12
CHMP4C-201ENST00000297265 SAP30BPQ9UHR5 308 aaKnown RBP15.78■□□□□ 0.12
CHMP4C-201ENST00000297265 PCDHA7Q9UN72 937 aa15.78■□□□□ 0.12
CHMP4C-201ENST00000297265 SCN9AQ15858 1988 aa15.77■□□□□ 0.12
CHMP4C-201ENST00000297265 MYH1P12882 1939 aa15.77■□□□□ 0.12
CHMP4C-201ENST00000297265 MYH6P13533 1939 aa15.77■□□□□ 0.12
CHMP4C-201ENST00000297265 GOLGA6L4A6NEF3 574 aa15.77■□□□□ 0.11
CHMP4C-201ENST00000297265 TSPY2A6NKD2 308 aa15.77■□□□□ 0.11
CHMP4C-201ENST00000297265 DEXIO95424 95 aa15.77■□□□□ 0.11
CHMP4C-201ENST00000297265 DEFB132Q7Z7B7 95 aa15.77■□□□□ 0.11
CHMP4C-201ENST00000297265 CATIPQ7Z7H3 387 aa15.77■□□□□ 0.11
CHMP4C-201ENST00000297265 TEX11Q8IYF3 940 aa15.77■□□□□ 0.11
CHMP4C-201ENST00000297265 RNF26Q9BY78 433 aaPredicted RBP15.77■□□□□ 0.11
CHMP4C-201ENST00000297265 DDAH1O94760 285 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 MMP1P03956 469 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 RASA1P20936 1047 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 CAMK4Q16566 473 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 SLF2Q8IX21 1173 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 RNF214Q8ND24 703 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 PPP1R9BQ96SB3 815 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 KCNJ14Q9UNX9 436 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 ADAMTSL1Q8N6G6 1762 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 BTBD18B2RXH4 712 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 YEATS4O95619 227 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 PLCG2P16885 1265 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 NT5C2P49902 561 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 ADALQ6DHV7 355 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 C16orf86Q6ZW13 317 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 PODNQ7Z5L7 613 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 DGKHQ86XP1 1220 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 CCAR1Q8IX12 1150 aaKnown RBP15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 TRIM22Q8IYM9 498 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 SRBD1Q8N5C6 995 aaKnown RBP15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 WASF1Q92558 559 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 MAP3K14Q99558 947 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 TCP11L1Q9NUJ3 509 aa15.76■□□□□ 0.11
CHMP4C-201ENST00000297265 USP17L3A6NCW0 530 aa15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 USP17L4A6NCW7 530 aa15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 F8W031 263 aaPredicted RBP15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 PRPF3O43395 683 aaKnown RBP15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 CALM1P0DP23 149 aa15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 CALM2P0DP24 149 aa15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 CALM3P0DP25 149 aa15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 PTPAQ15257 358 aa15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 ANO1Q5XXA6 986 aa15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 TMTC3Q6ZXV5 915 aa15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 USP17L1Q7RTZ2 530 aa15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 BICD2Q8TD16 824 aa15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 NUP62CLQ9H1M0 184 aa15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 CLSTN2Q9H4D0 955 aa15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 DBNDD1Q9H9R9 158 aa15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 DDX19AQ9NUU7 478 aaKnown RBP15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 RBM28Q9NW13 759 aaKnown RBP15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 TTF2Q9UNY4 1162 aaKnown RBP15.75■□□□□ 0.11
CHMP4C-201ENST00000297265 WDHD1O75717 1129 aaPredicted RBP15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 CDK8P49336 464 aa15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 TOB1P50616 345 aaPredicted RBP15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 AXDND1Q5T1B0 1012 aaPredicted RBP15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 APOBEC3HQ6NTF7 200 aaKnown RBP15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 EYA3Q99504 573 aa15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 MKNK2Q9HBH9 465 aa15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 DDX4Q9NQI0 724 aaKnown RBP15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 TAOK2Q9UL54 1235 aa15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 BAZ2BQ9UIF8 2168 aaKnown RBP15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 hCG_1642624A0A1W2PR95 340 aa15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 SPTLC2O15270 562 aa15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 ME1P48163 572 aa15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 SLC39A14Q15043 492 aa15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 SF3A1Q15459 793 aaKnown RBP15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 CNKSR1Q969H4 720 aa15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 PDLIM2Q96JY6 352 aa15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 V9GY48 417 aaPredicted RBP15.74■□□□□ 0.11
CHMP4C-201ENST00000297265 CNTNAP5Q8WYK1 1306 aa15.73■□□□□ 0.11
CHMP4C-201ENST00000297265 A0A1W2PQ27 194 aa15.73■□□□□ 0.11
CHMP4C-201ENST00000297265 A0A1W2PQ64 194 aa15.73■□□□□ 0.11
CHMP4C-201ENST00000297265 A0A1W2PQD8 194 aa15.73■□□□□ 0.11
CHMP4C-201ENST00000297265 VEGFAP15692 232 aaPredicted RBP15.73■□□□□ 0.11
CHMP4C-201ENST00000297265 SCNN1DP51172 638 aa15.73■□□□□ 0.11
CHMP4C-201ENST00000297265 GABPAQ06546 454 aa15.73■□□□□ 0.11
CHMP4C-201ENST00000297265 TRIM29Q14134 588 aa15.73■□□□□ 0.11
CHMP4C-201ENST00000297265 NPY5RQ15761 445 aa15.73■□□□□ 0.11
CHMP4C-201ENST00000297265 HHIPL2Q6UWX4 724 aa15.73■□□□□ 0.11
CHMP4C-201ENST00000297265 NOSTRINQ8IVI9 506 aa15.73■□□□□ 0.11
CHMP4C-201ENST00000297265 DIS3L2Q8IYB7 885 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms