RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 RPS6KA5O75582 802 aa13.02□□□□□ -0.33
SNIP1-201ENST00000296215 CBX3Q13185 183 aa13.02□□□□□ -0.33
SNIP1-201ENST00000296215 GJC2Q5T442 439 aaPredicted RBP13.02□□□□□ -0.33
SNIP1-201ENST00000296215 FNBP4Q8N3X1 1017 aaPredicted RBP13.02□□□□□ -0.33
SNIP1-201ENST00000296215 C2CD2Q9Y426 696 aa13.02□□□□□ -0.33
SNIP1-201ENST00000296215 TBL3Q12788 808 aaKnown RBP13.01□□□□□ -0.33
SNIP1-201ENST00000296215 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNIP1-201ENST00000296215 DNAAF2Q9NVR5 837 aaKnown RBP13.01□□□□□ -0.33
SNIP1-201ENST00000296215 CORO1CQ9ULV4 474 aaPredicted RBP13.01□□□□□ -0.33
SNIP1-201ENST00000296215 TNNQ9UQP3 1299 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 IKBKGQ9Y6K9 419 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 MCF2LO15068 1137 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 CCDC87Q9NVE4 849 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 LZTS1Q9Y250 596 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 CTDP1Q9Y5B0 961 aaPredicted RBP13.01□□□□□ -0.33
SNIP1-201ENST00000296215 H0Y3Z8 333 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 SUN1O94901 812 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 GUCY2FP51841 1108 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 ALS2CLQ60I27 953 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 FAM173BQ6P4H8 233 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 NYAP1Q6ZVC0 841 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 PLEKHG4BQ96PX9 1271 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 CTAGE1Q96RT6 745 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 DDX23Q9BUQ8 820 aaKnown RBP13.01□□□□□ -0.33
SNIP1-201ENST00000296215 B4DLN1 442 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 RALYLQ86SE5 291 aaKnown RBP13.01□□□□□ -0.33
SNIP1-201ENST00000296215 MSANTD4Q8NCY6 345 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 ZNF473Q8WTR7 871 aaKnown RBP13.01□□□□□ -0.33
SNIP1-201ENST00000296215 CCDC43Q96MW1 224 aaKnown RBP13.01□□□□□ -0.33
SNIP1-201ENST00000296215 STOML1Q9UBI4 398 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 BLOC1S6Q9UL45 172 aa13.01□□□□□ -0.33
SNIP1-201ENST00000296215 EME2A4GXA9 379 aaPredicted RBP13□□□□□ -0.33
SNIP1-201ENST00000296215 ZNF202O95125 648 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 BAG2O95816 211 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 ATP4AP20648 1035 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 KIF11P52732 1056 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 GUCY1B3Q02153 619 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 PLA2G4DQ86XP0 818 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 KIAA2013Q8IYS2 634 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 RTL1A6NKG5 1358 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 TSPY2A6NKD2 308 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 TSPY3P0CV98 308 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 TSPY8P0CW00 308 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 TSPY1Q01534 308 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 NBPF14Q5TI25 921 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 HS2ST1Q7LGA3 356 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 AIDAQ96BJ3 306 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 IQCDQ96DY2 449 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 TRIM35Q9UPQ4 493 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 WDR37Q9Y2I8 494 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 C15orf41Q9Y2V0 281 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 WDR46O15213 610 aaKnown RBP13□□□□□ -0.33
SNIP1-201ENST00000296215 CDC25CP30307 473 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 CCT6AP40227 531 aaKnown RBP13□□□□□ -0.33
SNIP1-201ENST00000296215 PDE6CP51160 858 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 PLEKHO1Q53GL0 409 aaPredicted RBP13□□□□□ -0.33
SNIP1-201ENST00000296215 ABHD8Q96I13 439 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 FAXDC2Q96IV6 333 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 COQ7Q99807 217 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 ATP8A1Q9Y2Q0 1164 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 GSTTP1A0A1W2PQM5 241 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 GMNCA6NCL1 334 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 FSBPO95073 299 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 ADKP55263 362 aaKnown RBP13□□□□□ -0.33
SNIP1-201ENST00000296215 TNNC1P63316 161 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 PDE1BQ01064 536 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 CCT8L2Q96SF2 557 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 RPS6KL1Q9Y6S9 549 aa13□□□□□ -0.33
SNIP1-201ENST00000296215 ADCY3O60266 1144 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 ALOX15P16050 662 aaPredicted RBP12.99□□□□□ -0.33
SNIP1-201ENST00000296215 CTNNA1P35221 906 aaKnown RBP12.99□□□□□ -0.33
SNIP1-201ENST00000296215 TMCO4Q5TGY1 634 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 CCDC102BQ68D86 513 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 FAM133AQ8N9E0 248 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 EPN3Q9H201 632 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 VIPAS39Q9H9C1 493 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 STX10O60499 249 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 KCNA3P22001 575 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 ATICP31939 592 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 ITGB3BPQ13352 177 aaPredicted RBP12.99□□□□□ -0.33
SNIP1-201ENST00000296215 MYBPC2Q14324 1141 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 CCDC93Q567U6 631 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 FAAH2Q6GMR7 532 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 CATSPER2Q96P56 530 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 UBAC1Q9BSL1 405 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 SELENOOQ9BVL4 669 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 TBC1D2BQ9UPU7 963 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 MAPKBP1O60336 1514 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 M0R2C6 588 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 CUTAO60888 179 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 EPS15P42566 896 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 NOP14P78316 857 aaKnown RBP12.99□□□□□ -0.33
SNIP1-201ENST00000296215 RCN2Q14257 317 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 THOC7Q6I9Y2 204 aaKnown RBP12.99□□□□□ -0.33
SNIP1-201ENST00000296215 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNIP1-201ENST00000296215 EPAS1Q99814 870 aa12.99□□□□□ -0.33
SNIP1-201ENST00000296215 C6orf203Q9P0P8 240 aaPredicted RBP12.99□□□□□ -0.33
SNIP1-201ENST00000296215 AKR1B10O60218 316 aa12.98□□□□□ -0.33
SNIP1-201ENST00000296215 CTNND1O60716 968 aaKnown RBP12.98□□□□□ -0.33
SNIP1-201ENST00000296215 GSTA2P09210 222 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms