RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 EP400Q96L91 3159 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 COL5A2P05997 1499 aaPredicted RBP15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 TCRBV5S4A2TA0A5A2 114 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 VEGFAP15692 232 aaPredicted RBP15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 SCP2P22307 547 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 SSRP1Q08945 709 aaKnown RBP15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 SUSD4Q5VX71 490 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 BICDL1Q6ZP65 573 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 DHX58Q96C10 678 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 MED15Q96RN5 788 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 WDR24Q96S15 920 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 GSG1L2A8MUP6 293 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 NMT2O60551 498 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 TOP1P11387 765 aaKnown RBP15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 MYL5Q02045 173 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 KRBA2Q6ZNG9 492 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 MKL1Q969V6 931 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 MPHOSPH8Q99549 860 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 LRP2BPQ9P2M1 347 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 MAPK8IP1Q9UQF2 711 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 NFE2L3Q9Y4A8 694 aa15.16■□□□□ 0.02
KCNIP3-201ENST00000295225 GYG1P46976 350 aa15.15■□□□□ 0.02
KCNIP3-201ENST00000295225 MFSD6Q6ZSS7 791 aa15.15■□□□□ 0.02
KCNIP3-201ENST00000295225 SDR16C5Q8N3Y7 309 aa15.15■□□□□ 0.02
KCNIP3-201ENST00000295225 OGFRQ9NZT2 677 aa15.15■□□□□ 0.02
KCNIP3-201ENST00000295225 A0A087X0B3 334 aa15.15■□□□□ 0.02
KCNIP3-201ENST00000295225 POLR3GO15318 223 aaPredicted RBP15.15■□□□□ 0.02
KCNIP3-201ENST00000295225 TEX33O43247 280 aa15.15■□□□□ 0.02
KCNIP3-201ENST00000295225 CAPN2P17655 700 aa15.15■□□□□ 0.02
KCNIP3-201ENST00000295225 GSDMDP57764 484 aa15.15■□□□□ 0.02
KCNIP3-201ENST00000295225 ATL3Q6DD88 541 aa15.15■□□□□ 0.02
KCNIP3-201ENST00000295225 DYNLL1P63167 89 aaKnown RBP15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 LRRFIP1Q32MZ4 808 aaKnown RBP15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 MSL3Q8N5Y2 521 aaKnown RBP15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 ZCCHC17Q9NP64 241 aaKnown RBP15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 MAN1B1Q9UKM7 699 aa15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 HPSEQ9Y251 543 aa15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 ABCC6O95255 1503 aa15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 GOLGA6CA6NDK9 693 aa15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 GOLGA6BA6NDN3 693 aa15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 MPHOSPH10O00566 681 aaKnown RBP15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 GOLGA6DP0CG33 693 aa15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 RESP18Q5W5W9 173 aa15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 OLFM4Q6UX06 510 aa15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 GPIHBP1Q8IV16 184 aa15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 NOSTRINQ8IVI9 506 aa15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 NME8Q8N427 588 aa15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 CSRNP2Q9H175 543 aa15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 LZTFL1Q9NQ48 299 aa15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 GOLGA6AQ9NYA3 693 aa15.14■□□□□ 0.01
KCNIP3-201ENST00000295225 NEMFO60524 1076 aa15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 ABL1P00519 1130 aa15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 CYP19A1P11511 503 aaPredicted RBP15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 CLCN6P51797 869 aa15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 TPM4P67936 248 aa15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 CPLX2Q6PUV4 134 aaKnown RBP15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 BLZF1Q9H2G9 400 aa15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 GYS2P54840 703 aa15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 ZNF397Q8NF99 534 aaPredicted RBP15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 SOS2Q07890 1332 aaPredicted RBP15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 CCDC66A2RUB6 948 aa15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 PLEKHA8P1O95397 391 aa15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 WTAPQ15007 396 aa15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 ZNF174Q15697 407 aa15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 RTN1Q16799 776 aa15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 TRIM65Q6PJ69 517 aa15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 ERO1AQ96HE7 468 aa15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 CCDC34Q96HJ3 373 aa15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 AKAP11Q9UKA4 1901 aa15.13■□□□□ 0.01
KCNIP3-201ENST00000295225 SOWAHDA6NJG2 315 aa15.12■□□□□ 0.01
KCNIP3-201ENST00000295225 GNG11P61952 73 aa15.12■□□□□ 0.01
KCNIP3-201ENST00000295225 AKNAD1Q5T1N1 836 aa15.12■□□□□ 0.01
KCNIP3-201ENST00000295225 KRI1Q8N9T8 703 aaKnown RBP15.12■□□□□ 0.01
KCNIP3-201ENST00000295225 PAIP2Q9BPZ3 127 aaKnown RBP15.12■□□□□ 0.01
KCNIP3-201ENST00000295225 TUBE1Q9UJT0 475 aa15.12■□□□□ 0.01
KCNIP3-201ENST00000295225 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.12■□□□□ 0.01
KCNIP3-201ENST00000295225 DCCP43146 1447 aa15.12■□□□□ 0.01
KCNIP3-201ENST00000295225 TULP2O00295 520 aa15.12■□□□□ 0.01
KCNIP3-201ENST00000295225 ADAMTS2O95450 1211 aa15.12■□□□□ 0.01
KCNIP3-201ENST00000295225 POSTNQ15063 836 aa15.12■□□□□ 0.01
KCNIP3-201ENST00000295225 REXO1L1PQ8IX06 675 aa15.12■□□□□ 0.01
KCNIP3-201ENST00000295225 NUP188Q5SRE5 1749 aa15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 CYP7A1P22680 504 aa15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 PUM3Q15397 648 aaKnown RBP15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 C3orf67Q6ZVT6 689 aa15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 CCDC150Q8NCX0 1101 aa15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 TIGD1Q96MW7 591 aa15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 PLIN2Q99541 437 aa15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 V9GY48 417 aaPredicted RBP15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 PDE8AO60658 829 aa15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 MMP1P03956 469 aa15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 CD44P16070 742 aaKnown RBP15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 MAP3K12Q12852 859 aa15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 NKX1-1Q15270 411 aaPredicted RBP15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 UBE3CQ15386 1083 aa15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 FAM47AQ5JRC9 791 aa15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 TEX35Q5T0J7 233 aa15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 CCDC125Q86Z20 511 aa15.11■□□□□ 0.01
KCNIP3-201ENST00000295225 VSTM4Q8IW00 320 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms