RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 MYH8P13535 1937 aa32.13■■■□□ 2.73
SSU72-201ENST00000291386 SREBF2Q12772 1141 aa32.13■■■□□ 2.73
SSU72-201ENST00000291386 C16orf86Q6ZW13 317 aa32.13■■■□□ 2.73
SSU72-201ENST00000291386 TBC1D2Q9BYX2 928 aa32.13■■■□□ 2.73
SSU72-201ENST00000291386 KCNH4Q9UQ05 1017 aa32.13■■■□□ 2.73
SSU72-201ENST00000291386 TESPA1A2RU30 521 aaPredicted RBP32.12■■■□□ 2.73
SSU72-201ENST00000291386 IRF6O14896 467 aa32.12■■■□□ 2.73
SSU72-201ENST00000291386 ASNSP08243 561 aa32.12■■■□□ 2.73
SSU72-201ENST00000291386 CERKLQ49MI3 558 aaPredicted RBP32.12■■■□□ 2.73
SSU72-201ENST00000291386 RUFY2Q8WXA3 655 aa32.12■■■□□ 2.73
SSU72-201ENST00000291386 DYNLL2Q96FJ2 89 aa32.12■■■□□ 2.73
SSU72-201ENST00000291386 MS4A4AQ96JQ5 239 aa32.12■■■□□ 2.73
SSU72-201ENST00000291386 SMIM22K7EJ46 135 aa32.11■■■□□ 2.73
SSU72-201ENST00000291386 GTF2A2P52657 109 aa32.11■■■□□ 2.73
SSU72-201ENST00000291386 AFG3L2Q9Y4W6 797 aa32.11■■■□□ 2.73
SSU72-201ENST00000291386 CDK8P49336 464 aa32.1■■■□□ 2.73
SSU72-201ENST00000291386 JAG1P78504 1218 aa32.1■■■□□ 2.73
SSU72-201ENST00000291386 ZHX2Q9Y6X8 837 aa32.1■■■□□ 2.73
SSU72-201ENST00000291386 MINDY4BA8MYZ0 360 aa32.09■■■□□ 2.73
SSU72-201ENST00000291386 CXCL11O14625 94 aa32.09■■■□□ 2.73
SSU72-201ENST00000291386 GDF11O95390 407 aa32.09■■■□□ 2.73
SSU72-201ENST00000291386 SLC44A5Q8NCS7 719 aa32.09■■■□□ 2.73
SSU72-201ENST00000291386 ZBTB21Q9ULJ3 1066 aa32.09■■■□□ 2.73
SSU72-201ENST00000291386 USP17L5A8MUK1 530 aa32.08■■■□□ 2.73
SSU72-201ENST00000291386 SNAPC2Q13487 334 aa32.08■■■□□ 2.73
SSU72-201ENST00000291386 IL25Q9H293 177 aa32.08■■■□□ 2.73
SSU72-201ENST00000291386 FGAP02671 866 aa32.07■■■□□ 2.72
SSU72-201ENST00000291386 PPARAQ07869 468 aa32.07■■■□□ 2.72
SSU72-201ENST00000291386 ABCB5Q2M3G0 1257 aa32.07■■■□□ 2.72
SSU72-201ENST00000291386 DSCC1Q9BVC3 393 aa32.07■■■□□ 2.72
SSU72-201ENST00000291386 ANAPC4Q9UJX5 808 aa32.07■■■□□ 2.72
SSU72-201ENST00000291386 PTPRFP10586 1907 aa32.06■■■□□ 2.72
SSU72-201ENST00000291386 CETPP11597 493 aa32.06■■■□□ 2.72
SSU72-201ENST00000291386 CCDC17Q96LX7 622 aa32.06■■■□□ 2.72
SSU72-201ENST00000291386 WDR18Q9BV38 432 aa32.06■■■□□ 2.72
SSU72-201ENST00000291386 AS3MTQ9HBK9 375 aa32.06■■■□□ 2.72
SSU72-201ENST00000291386 CABP5Q9NP86 173 aa32.06■■■□□ 2.72
SSU72-201ENST00000291386 FRMD4AQ9P2Q2 1039 aaPredicted RBP32.06■■■□□ 2.72
SSU72-201ENST00000291386 SGSM2O43147 1006 aa32.05■■■□□ 2.72
SSU72-201ENST00000291386 CA12O43570 354 aa32.05■■■□□ 2.72
SSU72-201ENST00000291386 GH2P01242 217 aa32.05■■■□□ 2.72
SSU72-201ENST00000291386 SHROOM1Q2M3G4 852 aaPredicted RBP32.05■■■□□ 2.72
SSU72-201ENST00000291386 SLC3A2P08195 630 aaKnown RBP32.04■■■□□ 2.72
SSU72-201ENST00000291386 IFNL1Q8IU54 200 aa32.04■■■□□ 2.72
SSU72-201ENST00000291386 ZNF280CQ8ND82 737 aa32.04■■■□□ 2.72
SSU72-201ENST00000291386 BRI3BPQ8WY22 251 aa32.04■■■□□ 2.72
SSU72-201ENST00000291386 BEGAINQ9BUH8 593 aa32.04■■■□□ 2.72
SSU72-201ENST00000291386 ZNF287Q9HBT7 754 aa32.04■■■□□ 2.72
SSU72-201ENST00000291386 SAGE1Q9NXZ1 904 aa32.04■■■□□ 2.72
SSU72-201ENST00000291386 CCL15-CCL14A0A0B4J2E2 113 aa32.03■■■□□ 2.72
SSU72-201ENST00000291386 HSPA1AP0DMV8 641 aaKnown RBP32.03■■■□□ 2.72
SSU72-201ENST00000291386 HSPA1BP0DMV9 641 aaKnown RBP32.03■■■□□ 2.72
SSU72-201ENST00000291386 CCL15Q16663 113 aa32.03■■■□□ 2.72
SSU72-201ENST00000291386 CCDC84Q86UT8 332 aaPredicted RBP32.03■■■□□ 2.72
SSU72-201ENST00000291386 PTPN18Q99952 460 aa32.03■■■□□ 2.72
SSU72-201ENST00000291386 A0A0G2JLL6 359 aaPredicted RBP32.02■■■□□ 2.72
SSU72-201ENST00000291386 ALDH1A1P00352 501 aa32.02■■■□□ 2.72
SSU72-201ENST00000291386 GUCY1A2P33402 732 aa32.02■■■□□ 2.72
SSU72-201ENST00000291386 PRRT2Q7Z6L0 340 aaPredicted RBP32.02■■■□□ 2.72
SSU72-201ENST00000291386 RNF186Q9NXI6 227 aa32.02■■■□□ 2.72
SSU72-201ENST00000291386 IGF2BP3O00425 579 aaKnown RBP eCLIP32.01■■■□□ 2.712e-6■□□□□ 8.4
SSU72-201ENST00000291386 MOGSQ13724 837 aa32.01■■■□□ 2.71
SSU72-201ENST00000291386 OTUD7BQ6GQQ9 843 aa32.01■■■□□ 2.71
SSU72-201ENST00000291386 TMEM179Q6ZVK1 233 aa32.01■■■□□ 2.71
SSU72-201ENST00000291386 MKNK2Q9HBH9 465 aa32.01■■■□□ 2.71
SSU72-201ENST00000291386 GREB1LQ9C091 1923 aaPredicted RBP32■■■□□ 2.71
SSU72-201ENST00000291386 AKR1B1P15121 316 aa32■■■□□ 2.71
SSU72-201ENST00000291386 RASA1P20936 1047 aa32■■■□□ 2.71
SSU72-201ENST00000291386 PDE4BQ07343 736 aa32■■■□□ 2.71
SSU72-201ENST00000291386 SPP2Q13103 211 aa32■■■□□ 2.71
SSU72-201ENST00000291386 CFHR5Q9BXR6 569 aa32■■■□□ 2.71
SSU72-201ENST00000291386 ZCCHC17Q9NP64 241 aaKnown RBP32■■■□□ 2.71
SSU72-201ENST00000291386 PCNTO95613 3336 aa32■■■□□ 2.71
SSU72-201ENST00000291386 LAMA4Q16363 1823 aa31.99■■■□□ 2.71
SSU72-201ENST00000291386 TRIM75PA6NK02 468 aa31.99■■■□□ 2.71
SSU72-201ENST00000291386 FGRP09769 529 aa31.99■■■□□ 2.71
SSU72-201ENST00000291386 SH3D19Q5HYK7 790 aa31.99■■■□□ 2.71
SSU72-201ENST00000291386 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.99■■■□□ 2.71
SSU72-201ENST00000291386 CDC45O75419 566 aa31.98■■■□□ 2.71
SSU72-201ENST00000291386 SEPT2Q15019 361 aa31.98■■■□□ 2.71
SSU72-201ENST00000291386 RAB3GAP1Q15042 981 aa31.98■■■□□ 2.71
SSU72-201ENST00000291386 FASTKD5Q7L8L6 764 aaKnown RBP31.98■■■□□ 2.71
SSU72-201ENST00000291386 CTNNA3Q9UI47 895 aa31.98■■■□□ 2.71
SSU72-201ENST00000291386 MPHOSPH10O00566 681 aaKnown RBP31.97■■■□□ 2.71
SSU72-201ENST00000291386 BACE1P56817 501 aa31.97■■■□□ 2.71
SSU72-201ENST00000291386 CTDSPL2Q05D32 466 aa31.97■■■□□ 2.71
SSU72-201ENST00000291386 ANKRD23Q86SG2 305 aa31.97■■■□□ 2.71
SSU72-201ENST00000291386 STK11IPQ8N1F8 1099 aa31.97■■■□□ 2.71
SSU72-201ENST00000291386 ESYT1Q9BSJ8 1104 aa31.97■■■□□ 2.71
SSU72-201ENST00000291386 LOC285556D6RIA3 1793 aa31.96■■■□□ 2.71
SSU72-201ENST00000291386 C19orf81C9J6K1 198 aa31.96■■■□□ 2.71
SSU72-201ENST00000291386 USP17L10C9JJH3 530 aa31.96■■■□□ 2.71
SSU72-201ENST00000291386 ZNF444Q8N0Y2 327 aaPredicted RBP31.96■■■□□ 2.71
SSU72-201ENST00000291386 BTBD19C9JJ37 291 aa31.95■■■□□ 2.71
SSU72-201ENST00000291386 FOXN1O15353 648 aa31.95■■■□□ 2.71
SSU72-201ENST00000291386 TRPA1O75762 1119 aa31.95■■■□□ 2.71
SSU72-201ENST00000291386 CASC1Q6TDU7 716 aa31.95■■■□□ 2.71
SSU72-201ENST00000291386 FAM43AQ8N2R8 423 aa31.95■■■□□ 2.71
SSU72-201ENST00000291386 PROCA1Q8NCQ7 364 aaPredicted RBP31.95■■■□□ 2.71
SSU72-201ENST00000291386 ORC4O43929 436 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms