RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 ENTPD3O75355 529 aa13.35□□□□□ -0.27
XRCC4-201ENST00000282268 IFIT1BQ5T764 474 aaKnown RBP13.35□□□□□ -0.27
XRCC4-201ENST00000282268 FOXD4L5Q5VV16 416 aaPredicted RBP13.35□□□□□ -0.27
XRCC4-201ENST00000282268 SYNE3Q6ZMZ3 975 aa13.35□□□□□ -0.27
XRCC4-201ENST00000282268 MICU3Q86XE3 530 aa13.35□□□□□ -0.27
XRCC4-201ENST00000282268 ENAHQ8N8S7 591 aaPredicted RBP13.35□□□□□ -0.27
XRCC4-201ENST00000282268 TRPM4Q8TD43 1214 aa13.35□□□□□ -0.27
XRCC4-201ENST00000282268 NUP133Q8WUM0 1156 aa13.35□□□□□ -0.27
XRCC4-201ENST00000282268 FOXD4L4Q8WXT5 416 aaPredicted RBP13.35□□□□□ -0.27
XRCC4-201ENST00000282268 ZBED3Q96IU2 234 aaPredicted RBP13.35□□□□□ -0.27
XRCC4-201ENST00000282268 DHX36Q9H2U1 1008 aaKnown RBP13.35□□□□□ -0.27
XRCC4-201ENST00000282268 GPRC5DQ9NZD1 345 aa13.35□□□□□ -0.27
XRCC4-201ENST00000282268 MTMR7Q9Y216 660 aa13.35□□□□□ -0.27
XRCC4-201ENST00000282268 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.35□□□□□ -0.27
XRCC4-201ENST00000282268 SLC12A7Q9Y666 1083 aa13.35□□□□□ -0.27
XRCC4-201ENST00000282268 ECM29Q5VYK3 1845 aa13.35□□□□□ -0.27
XRCC4-201ENST00000282268 DDX60LQ5H9U9 1706 aaKnown RBP13.35□□□□□ -0.27
XRCC4-201ENST00000282268 GRIN3BO60391 1043 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 CDAN1Q8IWY9 1227 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 FAM151AQ8WW52 585 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 GTF3C6Q969F1 213 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 DDX11Q96FC9 970 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 ZNF274Q96GC6 653 aaPredicted RBP13.34□□□□□ -0.27
XRCC4-201ENST00000282268 CSRNP1Q96S65 589 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 PI4KBQ9UBF8 816 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 HACL1Q9UJ83 578 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 FOCADQ5VW36 1801 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 CNTNAP1P78357 1384 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 GOLGA8AA7E2F4 631 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 ZBTB43O43298 467 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 JAK2O60674 1132 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 AKR1B1P15121 316 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 GJB2P29033 226 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 LMOD1P29536 600 aaPredicted RBP13.34□□□□□ -0.27
XRCC4-201ENST00000282268 METAP2P50579 478 aaKnown RBP eCLIP13.34□□□□□ -0.27
XRCC4-201ENST00000282268 FOSBP53539 338 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 GABPAQ06546 454 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 SEC23AQ15436 765 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 APOA5Q6Q788 366 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 INTS4Q96HW7 963 aaKnown RBP13.34□□□□□ -0.27
XRCC4-201ENST00000282268 CHMP5Q9NZZ3 219 aa13.34□□□□□ -0.27
XRCC4-201ENST00000282268 SBF1O95248 1867 aa13.33□□□□□ -0.27
XRCC4-201ENST00000282268 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
XRCC4-201ENST00000282268 SHMT1P34896 483 aa13.33□□□□□ -0.28
XRCC4-201ENST00000282268 LIFRP42702 1097 aa13.33□□□□□ -0.28
XRCC4-201ENST00000282268 FBXL16Q8N461 479 aa13.33□□□□□ -0.28
XRCC4-201ENST00000282268 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.33□□□□□ -0.28
XRCC4-201ENST00000282268 CWC22Q9HCG8 908 aaKnown RBP13.33□□□□□ -0.28
XRCC4-201ENST00000282268 IL17RBQ9NRM6 502 aa13.33□□□□□ -0.28
XRCC4-201ENST00000282268 SWAP70Q9UH65 585 aa13.33□□□□□ -0.28
XRCC4-201ENST00000282268 HPS5Q9UPZ3 1129 aa13.33□□□□□ -0.28
XRCC4-201ENST00000282268 GDF11O95390 407 aa13.32□□□□□ -0.28
XRCC4-201ENST00000282268 TNNI2P48788 182 aa13.32□□□□□ -0.28
XRCC4-201ENST00000282268 ATP2B2Q01814 1243 aa13.32□□□□□ -0.28
XRCC4-201ENST00000282268 RASA3Q14644 834 aa13.32□□□□□ -0.28
XRCC4-201ENST00000282268 SHROOM1Q2M3G4 852 aaPredicted RBP13.32□□□□□ -0.28
XRCC4-201ENST00000282268 ANGEL2Q5VTE6 544 aaKnown RBP13.32□□□□□ -0.28
XRCC4-201ENST00000282268 DPY19L2Q6NUT2 758 aa13.32□□□□□ -0.28
XRCC4-201ENST00000282268 MIGA2Q7L4E1 593 aa13.32□□□□□ -0.28
XRCC4-201ENST00000282268 CATIPQ7Z7H3 387 aa13.32□□□□□ -0.28
XRCC4-201ENST00000282268 CLEC10AQ8IUN9 316 aa13.32□□□□□ -0.28
XRCC4-201ENST00000282268 ZNF654Q8IZM8 581 aa13.32□□□□□ -0.28
XRCC4-201ENST00000282268 TMTC2Q8N394 836 aa13.32□□□□□ -0.28
XRCC4-201ENST00000282268 DNAJC18Q9H819 358 aa13.32□□□□□ -0.28
XRCC4-201ENST00000282268 KAT14Q9H8E8 782 aa13.32□□□□□ -0.28
XRCC4-201ENST00000282268 STX8Q9UNK0 236 aa13.32□□□□□ -0.28
XRCC4-201ENST00000282268 CPLX1O14810 134 aa13.31□□□□□ -0.28
XRCC4-201ENST00000282268 ADD1P35611 737 aaKnown RBP13.31□□□□□ -0.28
XRCC4-201ENST00000282268 MMP14P50281 582 aa13.31□□□□□ -0.28
XRCC4-201ENST00000282268 PKP1Q13835 747 aa13.31□□□□□ -0.28
XRCC4-201ENST00000282268 CERKLQ49MI3 558 aaPredicted RBP13.31□□□□□ -0.28
XRCC4-201ENST00000282268 PRAMEF18Q5VWM3 479 aa13.31□□□□□ -0.28
XRCC4-201ENST00000282268 SGMS1Q86VZ5 419 aa13.31□□□□□ -0.28
XRCC4-201ENST00000282268 FOXP4Q8IVH2 680 aaPredicted RBP13.31□□□□□ -0.28
XRCC4-201ENST00000282268 EHD4Q9H223 541 aa13.31□□□□□ -0.28
XRCC4-201ENST00000282268 DICER1Q9UPY3 1922 aaKnown RBP13.31□□□□□ -0.28
XRCC4-201ENST00000282268 PTPDC1A2A3K4 754 aa13.31□□□□□ -0.28
XRCC4-201ENST00000282268 CTDNEP1O95476 244 aa13.31□□□□□ -0.28
XRCC4-201ENST00000282268 CDC27P30260 824 aa13.31□□□□□ -0.28
XRCC4-201ENST00000282268 DDIT3P35638 169 aa13.31□□□□□ -0.28
XRCC4-201ENST00000282268 HIRAP54198 1017 aaPredicted RBP13.31□□□□□ -0.28
XRCC4-201ENST00000282268 EVCP57679 992 aa13.31□□□□□ -0.28
XRCC4-201ENST00000282268 CCDC82Q8N4S0 544 aa13.31□□□□□ -0.28
XRCC4-201ENST00000282268 NEDD1Q8NHV4 660 aa13.31□□□□□ -0.28
XRCC4-201ENST00000282268 CEP95Q96GE4 821 aa13.31□□□□□ -0.28
XRCC4-201ENST00000282268 MTA3Q9BTC8 594 aa13.31□□□□□ -0.28
XRCC4-201ENST00000282268 GGA3Q9NZ52 723 aa13.31□□□□□ -0.28
XRCC4-201ENST00000282268 TNFAIP1Q13829 316 aa13.3□□□□□ -0.28
XRCC4-201ENST00000282268 RTN1Q16799 776 aa13.3□□□□□ -0.28
XRCC4-201ENST00000282268 FKBP1CQ5VVH2 108 aa13.3□□□□□ -0.28
XRCC4-201ENST00000282268 RCSD1Q6JBY9 416 aa13.3□□□□□ -0.28
XRCC4-201ENST00000282268 FAM83AQ86UY5 434 aa13.3□□□□□ -0.28
XRCC4-201ENST00000282268 CMTR1Q8N1G2 835 aaKnown RBP13.3□□□□□ -0.28
XRCC4-201ENST00000282268 FAM184AQ8NB25 1140 aa13.3□□□□□ -0.28
XRCC4-201ENST00000282268 NSUN7Q8NE18 718 aaKnown RBP13.3□□□□□ -0.28
XRCC4-201ENST00000282268 ATRNL1Q5VV63 1379 aa13.3□□□□□ -0.28
XRCC4-201ENST00000282268 RAD21O60216 631 aa13.29□□□□□ -0.28
XRCC4-201ENST00000282268 CCDC178Q5BJE1 867 aa13.29□□□□□ -0.28
XRCC4-201ENST00000282268 TMEM47Q9BQJ4 181 aa13.29□□□□□ -0.28
XRCC4-201ENST00000282268 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms