RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 RAD17O75943 681 aa16.96■□□□□ 0.31
TRIM23-202ENST00000274327 GABPAQ06546 454 aa16.96■□□□□ 0.31
TRIM23-202ENST00000274327 RTN1Q16799 776 aa16.96■□□□□ 0.31
TRIM23-202ENST00000274327 CCDC178Q5BJE1 867 aa16.96■□□□□ 0.31
TRIM23-202ENST00000274327 CPLX2Q6PUV4 134 aaKnown RBP16.96■□□□□ 0.31
TRIM23-202ENST00000274327 TTC6Q86TZ1 520 aa16.96■□□□□ 0.31
TRIM23-202ENST00000274327 RGS22Q8NE09 1264 aa16.96■□□□□ 0.31
TRIM23-202ENST00000274327 ORC3Q9UBD5 711 aaPredicted RBP16.96■□□□□ 0.31
TRIM23-202ENST00000274327 SIPA1L1O43166 1804 aa16.96■□□□□ 0.31
TRIM23-202ENST00000274327 MYH15Q9Y2K3 1946 aa16.96■□□□□ 0.31
TRIM23-202ENST00000274327 TRAK2O60296 914 aa16.96■□□□□ 0.3
TRIM23-202ENST00000274327 NMT2O60551 498 aa16.96■□□□□ 0.3
TRIM23-202ENST00000274327 NFIAQ12857 509 aa16.96■□□□□ 0.3
TRIM23-202ENST00000274327 PPP2R5BQ15173 497 aa16.96■□□□□ 0.3
TRIM23-202ENST00000274327 CFAP100Q494V2 611 aa16.96■□□□□ 0.3
TRIM23-202ENST00000274327 RCSD1Q6JBY9 416 aa16.96■□□□□ 0.3
TRIM23-202ENST00000274327 CCDC144CPQ8IYA2 1237 aa16.96■□□□□ 0.3
TRIM23-202ENST00000274327 ZNF444Q8N0Y2 327 aaPredicted RBP16.96■□□□□ 0.3
TRIM23-202ENST00000274327 IL17RBQ9NRM6 502 aa16.96■□□□□ 0.3
TRIM23-202ENST00000274327 BCS1LQ9Y276 419 aa16.96■□□□□ 0.3
TRIM23-202ENST00000274327 STK36Q9NRP7 1315 aa16.95■□□□□ 0.3
TRIM23-202ENST00000274327 DDAH1O94760 285 aa16.95■□□□□ 0.3
TRIM23-202ENST00000274327 IFNAR1P17181 557 aa16.95■□□□□ 0.3
TRIM23-202ENST00000274327 RBM5P52756 815 aaKnown RBP eCLIP16.95■□□□□ 0.3
TRIM23-202ENST00000274327 RESTQ13127 1097 aa16.95■□□□□ 0.3
TRIM23-202ENST00000274327 L1TD1Q5T7N2 865 aaKnown RBP16.95■□□□□ 0.3
TRIM23-202ENST00000274327 DGKHQ86XP1 1220 aa16.95■□□□□ 0.3
TRIM23-202ENST00000274327 FANCBQ8NB91 859 aa16.95■□□□□ 0.3
TRIM23-202ENST00000274327 NLGN2Q8NFZ4 835 aa16.95■□□□□ 0.3
TRIM23-202ENST00000274327 H3BQV1 296 aa16.94■□□□□ 0.3
TRIM23-202ENST00000274327 PPFIA3O75145 1194 aa16.94■□□□□ 0.3
TRIM23-202ENST00000274327 CALM1P0DP23 149 aa16.94■□□□□ 0.3
TRIM23-202ENST00000274327 CALM2P0DP24 149 aa16.94■□□□□ 0.3
TRIM23-202ENST00000274327 CALM3P0DP25 149 aa16.94■□□□□ 0.3
TRIM23-202ENST00000274327 TROAPQ12815 778 aa16.94■□□□□ 0.3
TRIM23-202ENST00000274327 IFFO2Q5TF58 517 aa16.94■□□□□ 0.3
TRIM23-202ENST00000274327 CATIPQ7Z7H3 387 aa16.94■□□□□ 0.3
TRIM23-202ENST00000274327 TMEM87AQ8NBN3 555 aa16.94■□□□□ 0.3
TRIM23-202ENST00000274327 AGBL3Q8NEM8 1001 aa16.94■□□□□ 0.3
TRIM23-202ENST00000274327 NEDD1Q8NHV4 660 aa16.94■□□□□ 0.3
TRIM23-202ENST00000274327 FAM198AQ9UFP1 575 aa16.94■□□□□ 0.3
TRIM23-202ENST00000274327 CCDC196A0A1B0GTZ2 297 aa16.93■□□□□ 0.3
TRIM23-202ENST00000274327 TSPY3P0CV98 308 aa16.93■□□□□ 0.3
TRIM23-202ENST00000274327 TSPY8P0CW00 308 aa16.93■□□□□ 0.3
TRIM23-202ENST00000274327 CXCL9Q07325 125 aa16.93■□□□□ 0.3
TRIM23-202ENST00000274327 SKOR2Q2VWA4 1001 aaPredicted RBP16.93■□□□□ 0.3
TRIM23-202ENST00000274327 SPON1Q9HCB6 807 aa16.93■□□□□ 0.3
TRIM23-202ENST00000274327 MYH6P13533 1939 aa16.93■□□□□ 0.3
TRIM23-202ENST00000274327 FMNL1O95466 1100 aaPredicted RBP16.93■□□□□ 0.3
TRIM23-202ENST00000274327 FOXD4L6Q3SYB3 417 aaPredicted RBP16.93■□□□□ 0.3
TRIM23-202ENST00000274327 FOXD4L3Q6VB84 417 aaPredicted RBP16.93■□□□□ 0.3
TRIM23-202ENST00000274327 NBPF11Q86T75 865 aa16.93■□□□□ 0.3
TRIM23-202ENST00000274327 FERMT3Q86UX7 667 aa16.93■□□□□ 0.3
TRIM23-202ENST00000274327 NUP133Q8WUM0 1156 aa16.93■□□□□ 0.3
TRIM23-202ENST00000274327 EHD4Q9H223 541 aa16.93■□□□□ 0.3
TRIM23-202ENST00000274327 ZSCAN16Q9H4T2 348 aaPredicted RBP16.93■□□□□ 0.3
TRIM23-202ENST00000274327 SWAP70Q9UH65 585 aa16.93■□□□□ 0.3
TRIM23-202ENST00000274327 HDAC9Q9UKV0 1011 aa16.93■□□□□ 0.3
TRIM23-202ENST00000274327 PLIN4Q96Q06 1357 aa16.93■□□□□ 0.3
TRIM23-202ENST00000274327 GREB1LQ9C091 1923 aaPredicted RBP16.92■□□□□ 0.3
TRIM23-202ENST00000274327 COL2A1P02458 1487 aaPredicted RBP16.92■□□□□ 0.3
TRIM23-202ENST00000274327 PRPF40AO75400 957 aaKnown RBP16.92■□□□□ 0.3
TRIM23-202ENST00000274327 NOVP48745 357 aa16.92■□□□□ 0.3
TRIM23-202ENST00000274327 ZFPM1Q8IX07 1006 aa16.92■□□□□ 0.3
TRIM23-202ENST00000274327 PHKBQ93100 1093 aa16.92■□□□□ 0.3
TRIM23-202ENST00000274327 PRMT6Q96LA8 375 aaPredicted RBP16.92■□□□□ 0.3
TRIM23-202ENST00000274327 RBM28Q9NW13 759 aaKnown RBP16.92■□□□□ 0.3
TRIM23-202ENST00000274327 HLA-DOAP06340 250 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 CACNB3P54284 484 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 DNM1Q05193 864 aaKnown RBP16.91■□□□□ 0.3
TRIM23-202ENST00000274327 SSRP1Q08945 709 aaKnown RBP16.91■□□□□ 0.3
TRIM23-202ENST00000274327 CIAPIN1Q6FI81 312 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 MTMR14Q8NCE2 650 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 FBXO18Q8NFZ0 1043 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 JDP2Q8WYK2 163 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 C8orf76Q96K31 380 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 DHX36Q9H2U1 1008 aaKnown RBP16.91■□□□□ 0.3
TRIM23-202ENST00000274327 TDRD3Q9H7E2 651 aaKnown RBP16.91■□□□□ 0.3
TRIM23-202ENST00000274327 SERPINB13Q9UIV8 391 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 TAOK2Q9UL54 1235 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 CNPY2Q9Y2B0 182 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 ZBTB12Q9Y330 459 aaPredicted RBP16.91■□□□□ 0.3
TRIM23-202ENST00000274327 SPDYE2BA6NHP3 402 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 ENTPD3O75355 529 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 SPDYE6P0CI01 402 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 FOSBP53539 338 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 FAM43AQ8N2R8 423 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 CRACR2BQ8N4Y2 399 aaPredicted RBP16.91■□□□□ 0.3
TRIM23-202ENST00000274327 MAP3K14Q99558 947 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 SLC26A6Q9BXS9 759 aa16.91■□□□□ 0.3
TRIM23-202ENST00000274327 RASSF7Q02833 373 aa16.9■□□□□ 0.3
TRIM23-202ENST00000274327 FUT2Q10981 343 aa16.9■□□□□ 0.3
TRIM23-202ENST00000274327 SH3BP5LQ7L8J4 393 aa16.9■□□□□ 0.3
TRIM23-202ENST00000274327 ALG1Q9BT22 464 aa16.9■□□□□ 0.3
TRIM23-202ENST00000274327 KAT14Q9H8E8 782 aa16.9■□□□□ 0.3
TRIM23-202ENST00000274327 ATRNL1Q5VV63 1379 aa16.9■□□□□ 0.3
TRIM23-202ENST00000274327 DDTLA6NHG4 134 aaPredicted RBP16.89■□□□□ 0.29
TRIM23-202ENST00000274327 SHMT1P34896 483 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 PRELPP51888 382 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 GUCY1B3Q02153 619 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms