RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 KIF9Q9HAQ2 790 aa17.81■□□□□ 0.44
CTDSP1-201ENST00000273062 GOLGA6AQ9NYA3 693 aa17.81■□□□□ 0.44
CTDSP1-201ENST00000273062 ZNF330Q9Y3S2 320 aaPredicted RBP17.81■□□□□ 0.44
CTDSP1-201ENST00000273062 SHTN1A0MZ66 631 aa17.81■□□□□ 0.44
CTDSP1-201ENST00000273062 ERVV-2B6SEH9 535 aa17.81■□□□□ 0.44
CTDSP1-201ENST00000273062 PTPN12Q05209 780 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-201ENST00000273062 TBX2Q13207 712 aaPredicted RBP17.81■□□□□ 0.44
CTDSP1-201ENST00000273062 OTUD6BQ8N6M0 293 aa17.81■□□□□ 0.44
CTDSP1-201ENST00000273062 GBP3Q9H0R5 595 aa17.81■□□□□ 0.44
CTDSP1-201ENST00000273062 LAMB4A4D0S4 1761 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 CTAGE15A4D2H0 777 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 PFKFB2O60825 505 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 CTAGE8P0CG41 777 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 MYBL2P10244 700 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 CASP7P55210 303 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 TFCP2Q12800 502 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 ARMC3Q5W041 872 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 CTAGE6Q86UF2 777 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 FAM228AQ86W67 206 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 CTAGE4Q8IX94 777 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 MAP4K1Q92918 833 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 GPATCH3Q96I76 525 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 BTG4Q9NY30 223 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 CCDC9Q9Y3X0 531 aaKnown RBP17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 CAND2O75155 1236 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 PEX19P40855 299 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 STIM1Q13586 685 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 NKX1-1Q15270 411 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 ZC3H12AQ5D1E8 599 aaKnown RBP17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 SLC35F6Q8N357 371 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 HINFPQ9BQA5 517 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 VIPAS39Q9H9C1 493 aa17.8■□□□□ 0.44
CTDSP1-201ENST00000273062 IKBKBO14920 756 aa17.79■□□□□ 0.44
CTDSP1-201ENST00000273062 E2F5Q15329 346 aa17.79■□□□□ 0.44
CTDSP1-201ENST00000273062 CEP85LQ5SZL2 805 aa17.79■□□□□ 0.44
CTDSP1-201ENST00000273062 RAD9BQ6WBX8 426 aa17.79■□□□□ 0.44
CTDSP1-201ENST00000273062 ETAA1Q9NY74 926 aa17.79■□□□□ 0.44
CTDSP1-201ENST00000273062 CHGBP05060 677 aa17.79■□□□□ 0.44
CTDSP1-201ENST00000273062 SSBP05455 408 aaKnown RBP eCLIP17.79■□□□□ 0.44
CTDSP1-201ENST00000273062 PSMA5P28066 241 aa17.79■□□□□ 0.44
CTDSP1-201ENST00000273062 ANKRD1Q15327 319 aa17.79■□□□□ 0.44
CTDSP1-201ENST00000273062 RUFY2Q8WXA3 655 aa17.79■□□□□ 0.44
CTDSP1-201ENST00000273062 MEFVO15553 781 aaPredicted RBP17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 PPP1R12BO60237 982 aaPredicted RBP17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 RPSAP08865 295 aaKnown RBP17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 GCKP35557 465 aa17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 ADCY2Q08462 1091 aa17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 SNX1Q13596 522 aa17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 NAA25Q14CX7 972 aa17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 LMBR1LQ6UX01 489 aa17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 COG1Q8WTW3 980 aa17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 TOGARAM1Q9Y4F4 1720 aa17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 UBR2Q8IWV8 1755 aa17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 CBFA2T2O43439 604 aa17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 RASSF9O75901 435 aa17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 NMIQ13287 307 aaPredicted RBP17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 RABL6Q3YEC7 729 aaPredicted RBP17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 WDR93Q6P2C0 686 aa17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 EVI5LQ96CN4 794 aa17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 IRAK4Q9NWZ3 460 aa17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 DBNLQ9UJU6 430 aaKnown RBP17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 ASAP1Q9ULH1 1129 aa17.78■□□□□ 0.44
CTDSP1-201ENST00000273062 NDUFAB1O14561 156 aa17.77■□□□□ 0.44
CTDSP1-201ENST00000273062 CCDC175P0C221 793 aa17.77■□□□□ 0.44
CTDSP1-201ENST00000273062 MYL5Q02045 173 aa17.77■□□□□ 0.44
CTDSP1-201ENST00000273062 PPFIA1Q13136 1202 aa17.77■□□□□ 0.44
CTDSP1-201ENST00000273062 NBPF9Q3BBW0 867 aa17.77■□□□□ 0.44
CTDSP1-201ENST00000273062 AP1ARQ63HQ0 302 aa17.77■□□□□ 0.44
CTDSP1-201ENST00000273062 COPRSQ9NQ92 184 aa17.77■□□□□ 0.44
CTDSP1-201ENST00000273062 ADGRG1Q9Y653 693 aa17.77■□□□□ 0.44
CTDSP1-201ENST00000273062 KIF5CO60282 957 aa17.77■□□□□ 0.43
CTDSP1-201ENST00000273062 PDCLQ13371 301 aa17.77■□□□□ 0.43
CTDSP1-201ENST00000273062 A0A0D9SFI3 127 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 KIAA0754O94854 1291 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 FOXO4P98177 505 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 TLDC1Q6P9B6 456 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 CCDC26Q8TAB7 109 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 ITFG2Q969R8 447 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 ZBTB10Q96DT7 871 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 CLIC4Q9Y696 253 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 CTAGE9A4FU28 777 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 CTDNEP1O95476 244 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 CCDC40Q4G0X9 1142 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 TNNI3KQ59H18 835 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 ADALQ6DHV7 355 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 CCDC13Q8IYE1 715 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 SLC40A1Q9NP59 571 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 FPGT-TNNI3KV9GXZ4 949 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 NHSL1Q5SYE7 1610 aa17.76■□□□□ 0.43
CTDSP1-201ENST00000273062 SSR1P43307 286 aaKnown RBP17.75■□□□□ 0.43
CTDSP1-201ENST00000273062 ZKSCAN8Q15776 578 aaPredicted RBP17.75■□□□□ 0.43
CTDSP1-201ENST00000273062 ANKRD18AQ8IVF6 992 aa17.75■□□□□ 0.43
CTDSP1-201ENST00000273062 PIGBQ92521 554 aa17.75■□□□□ 0.43
CTDSP1-201ENST00000273062 FSD1Q9BTV5 496 aa17.75■□□□□ 0.43
CTDSP1-201ENST00000273062 TMOD3Q9NYL9 352 aa17.75■□□□□ 0.43
CTDSP1-201ENST00000273062 PAPPAQ13219 1627 aa17.75■□□□□ 0.43
CTDSP1-201ENST00000273062 CDC27P30260 824 aa17.75■□□□□ 0.43
CTDSP1-201ENST00000273062 MICAL1Q8TDZ2 1067 aa17.75■□□□□ 0.43
CTDSP1-201ENST00000273062 DBNDD2Q9BQY9 259 aa17.75■□□□□ 0.43
CTDSP1-201ENST00000273062 TNS2Q63HR2 1409 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms