RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 MAP3K11Q16584 847 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 SLC4A8Q2Y0W8 1093 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 CCAR1Q8IX12 1150 aaKnown RBP19.28■□□□□ 0.68
CCDC40-201ENST00000269318 DYNLL2Q96FJ2 89 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 GOLPH3LQ9H4A5 285 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 PCDHA7Q9UN72 937 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 SUGT1Q9Y2Z0 365 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 QSER1Q2KHR3 1735 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 PLCG2P16885 1265 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 ME1P48163 572 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 CAMK4Q16566 473 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 ANO1Q5XXA6 986 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 RCSD1Q6JBY9 416 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 C2CD5Q86YS7 1000 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 MAPKAPK5Q8IW41 473 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 CCDC82Q8N4S0 544 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 KCNG4Q8TDN1 519 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.28■□□□□ 0.68
CCDC40-201ENST00000269318 TNMDQ9H2S6 317 aa19.28■□□□□ 0.68
CCDC40-201ENST00000269318 RBM28Q9NW13 759 aaKnown RBP19.28■□□□□ 0.68
CCDC40-201ENST00000269318 TSPY2A6NKD2 308 aa19.27■□□□□ 0.68
CCDC40-201ENST00000269318 MMP1P03956 469 aa19.27■□□□□ 0.68
CCDC40-201ENST00000269318 PLCD1P51178 756 aa19.27■□□□□ 0.68
CCDC40-201ENST00000269318 EN1Q05925 392 aaPredicted RBP19.27■□□□□ 0.68
CCDC40-201ENST00000269318 STYK1Q6J9G0 422 aa19.27■□□□□ 0.68
CCDC40-201ENST00000269318 ENGASEQ8NFI3 743 aa19.27■□□□□ 0.68
CCDC40-201ENST00000269318 PDLIM2Q96JY6 352 aa19.27■□□□□ 0.68
CCDC40-201ENST00000269318 A0A1W2PQ27 194 aa19.26■□□□□ 0.67
CCDC40-201ENST00000269318 A0A1W2PQ64 194 aa19.26■□□□□ 0.67
CCDC40-201ENST00000269318 A0A1W2PQD8 194 aa19.26■□□□□ 0.67
CCDC40-201ENST00000269318 SNW1Q13573 536 aaKnown RBP19.26■□□□□ 0.67
CCDC40-201ENST00000269318 STK38Q15208 465 aa19.26■□□□□ 0.67
CCDC40-201ENST00000269318 ADALQ6DHV7 355 aa19.26■□□□□ 0.67
CCDC40-201ENST00000269318 AMOTL1Q8IY63 956 aa19.26■□□□□ 0.67
CCDC40-201ENST00000269318 TEX11Q8IYF3 940 aa19.26■□□□□ 0.67
CCDC40-201ENST00000269318 CERS5Q8N5B7 392 aa19.26■□□□□ 0.67
CCDC40-201ENST00000269318 ZNF622Q969S3 477 aaKnown RBP eCLIP19.26■□□□□ 0.67
CCDC40-201ENST00000269318 DAGLAQ9Y4D2 1042 aa19.26■□□□□ 0.67
CCDC40-201ENST00000269318 FLT1P17948 1338 aa19.26■□□□□ 0.67
CCDC40-201ENST00000269318 SPTLC2O15270 562 aa19.26■□□□□ 0.67
CCDC40-201ENST00000269318 TFAP4Q01664 338 aa19.26■□□□□ 0.67
CCDC40-201ENST00000269318 ANKS1AQ92625 1134 aa19.26■□□□□ 0.67
CCDC40-201ENST00000269318 IL17RBQ9NRM6 502 aa19.26■□□□□ 0.67
CCDC40-201ENST00000269318 PRPF3O43395 683 aaKnown RBP19.25■□□□□ 0.67
CCDC40-201ENST00000269318 PLEKHA8P1O95397 391 aa19.25■□□□□ 0.67
CCDC40-201ENST00000269318 CCDC192P0DO97 292 aa19.25■□□□□ 0.67
CCDC40-201ENST00000269318 PKN1Q16512 942 aa19.25■□□□□ 0.67
CCDC40-201ENST00000269318 UVSSAQ2YD98 709 aa19.25■□□□□ 0.67
CCDC40-201ENST00000269318 TMTC3Q6ZXV5 915 aa19.25■□□□□ 0.67
CCDC40-201ENST00000269318 SAP30BPQ9UHR5 308 aaKnown RBP19.25■□□□□ 0.67
CCDC40-201ENST00000269318 H0YIN7 160 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 SLC39A14Q15043 492 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 DOK7Q18PE1 504 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 DGKHQ86XP1 1220 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 SHISA4Q96DD7 197 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 TMX4Q9H1E5 349 aaPredicted RBP19.24■□□□□ 0.67
CCDC40-201ENST00000269318 STK32BQ9NY57 414 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 KCNJ14Q9UNX9 436 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 FOCADQ5VW36 1801 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 FAM160A1Q05DH4 1040 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 GNL2Q13823 731 aaKnown RBP19.24■□□□□ 0.67
CCDC40-201ENST00000269318 CCDC73Q6ZRK6 1079 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 NOSTRINQ8IVI9 506 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 CKAP2LQ8IYA6 745 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 DIS3L2Q8IYB7 885 aaKnown RBP19.24■□□□□ 0.67
CCDC40-201ENST00000269318 FSIP1Q8NA03 581 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 SLC44A5Q8NCS7 719 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 EYA3Q99504 573 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 MAP3K14Q99558 947 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 FOXP1Q9H334 677 aaPredicted RBP19.24■□□□□ 0.67
CCDC40-201ENST00000269318 MKNK2Q9HBH9 465 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 TCP11L1Q9NUJ3 509 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 TAOK2Q9UL54 1235 aa19.24■□□□□ 0.67
CCDC40-201ENST00000269318 BTBD18B2RXH4 712 aa19.23■□□□□ 0.67
CCDC40-201ENST00000269318 PTPAQ15257 358 aa19.23■□□□□ 0.67
CCDC40-201ENST00000269318 SF3A1Q15459 793 aaKnown RBP19.23■□□□□ 0.67
CCDC40-201ENST00000269318 MRPS27Q92552 414 aaKnown RBP19.23■□□□□ 0.67
CCDC40-201ENST00000269318 RASA1P20936 1047 aa19.23■□□□□ 0.67
CCDC40-201ENST00000269318 TYRO3Q06418 890 aa19.23■□□□□ 0.67
CCDC40-201ENST00000269318 SAFBQ15424 915 aaKnown RBP eCLIP19.23■□□□□ 0.67
CCDC40-201ENST00000269318 AXDND1Q5T1B0 1012 aaPredicted RBP19.23■□□□□ 0.67
CCDC40-201ENST00000269318 C16orf86Q6ZW13 317 aa19.23■□□□□ 0.67
CCDC40-201ENST00000269318 MRVI1Q9Y6F6 885 aa19.23■□□□□ 0.67
CCDC40-201ENST00000269318 SNED1Q8TER0 1413 aa19.22■□□□□ 0.67
CCDC40-201ENST00000269318 SLX4Q8IY92 1834 aa19.22■□□□□ 0.67
CCDC40-201ENST00000269318 CNTNAP5Q8WYK1 1306 aa19.22■□□□□ 0.67
CCDC40-201ENST00000269318 FMR1NBQ8N0W7 255 aaPredicted RBP19.22■□□□□ 0.67
CCDC40-201ENST00000269318 SRBD1Q8N5C6 995 aaKnown RBP19.22■□□□□ 0.67
CCDC40-201ENST00000269318 CTCFLQ8NI51 663 aaPredicted RBP19.22■□□□□ 0.67
CCDC40-201ENST00000269318 MXD3Q9BW11 206 aa19.22■□□□□ 0.67
CCDC40-201ENST00000269318 MYH6P13533 1939 aa19.22■□□□□ 0.67
CCDC40-201ENST00000269318 CHRNA5P30532 468 aa19.21■□□□□ 0.67
CCDC40-201ENST00000269318 AKAP17AQ02040 695 aaKnown RBP19.21■□□□□ 0.67
CCDC40-201ENST00000269318 CCDC178Q5BJE1 867 aa19.21■□□□□ 0.67
CCDC40-201ENST00000269318 FBXW7Q969H0 707 aa19.21■□□□□ 0.67
CCDC40-201ENST00000269318 V9GY48 417 aaPredicted RBP19.21■□□□□ 0.67
CCDC40-201ENST00000269318 USP17L3A6NCW0 530 aa19.21■□□□□ 0.67
CCDC40-201ENST00000269318 USP17L4A6NCW7 530 aa19.21■□□□□ 0.67
CCDC40-201ENST00000269318 CTAGE5O15320 804 aa19.21■□□□□ 0.67
CCDC40-201ENST00000269318 PPP6R2O75170 966 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 293.5 ms