RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 IBSPP21815 317 aaPredicted RBP13.07□□□□□ -0.32
CLSTN3-201ENST00000266546 ATP2B4P23634 1241 aa13.07□□□□□ -0.32
CLSTN3-201ENST00000266546 ADORA1P30542 326 aa13.07□□□□□ -0.32
CLSTN3-201ENST00000266546 PDE6BP35913 854 aa13.07□□□□□ -0.32
CLSTN3-201ENST00000266546 CDK5RAP3Q96JB5 506 aa13.07□□□□□ -0.32
CLSTN3-201ENST00000266546 SEC62Q99442 399 aaKnown RBP13.07□□□□□ -0.32
CLSTN3-201ENST00000266546 SEC31BQ9NQW1 1179 aa13.07□□□□□ -0.32
CLSTN3-201ENST00000266546 SRP68Q9UHB9 627 aaKnown RBP13.07□□□□□ -0.32
CLSTN3-201ENST00000266546 USO1O60763 962 aaKnown RBP13.07□□□□□ -0.32
CLSTN3-201ENST00000266546 WDHD1O75717 1129 aaPredicted RBP13.07□□□□□ -0.32
CLSTN3-201ENST00000266546 LARGE1O95461 756 aa13.07□□□□□ -0.32
CLSTN3-201ENST00000266546 PLCG2P16885 1265 aa13.07□□□□□ -0.32
CLSTN3-201ENST00000266546 CDC25BP30305 580 aa13.07□□□□□ -0.32
CLSTN3-201ENST00000266546 KCNQ4P56696 695 aa13.07□□□□□ -0.32
CLSTN3-201ENST00000266546 MICALCLQ6ZW33 695 aa13.07□□□□□ -0.32
CLSTN3-201ENST00000266546 RANBP6O60518 1105 aaKnown RBP13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 BBOX1O75936 387 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 NTSR2O95665 410 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 SERPINB2P05120 415 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 AFMP43652 599 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 NLRP12P59046 1061 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 ATP2B2Q01814 1243 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 ZNF512BQ96KM6 892 aaPredicted RBP13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 USP28Q96RU2 1077 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 ZC3H12CQ9C0D7 883 aaKnown RBP13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 KIAA1468Q9P260 1216 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 ZBTB43O43298 467 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 EBAG9O00559 213 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 CKAP4Q07065 602 aaKnown RBP13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 NAA30Q147X3 362 aaPredicted RBP13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 CCDC178Q5BJE1 867 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 TBC1D9BQ66K14 1250 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 OTUD7BQ6GQQ9 843 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 FBXO38Q6PIJ6 1188 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 GPR161Q8N6U8 529 aaKnown RBP13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 PSDA5PKW4 1024 aaPredicted RBP13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 PHKA1P46020 1223 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 PDE4BQ07343 736 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 ANO1Q5XXA6 986 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 EHBP1Q8NDI1 1231 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 SLC4A9Q96Q91 983 aa13.06□□□□□ -0.32
CLSTN3-201ENST00000266546 ERLIN2O94905 339 aa13.05□□□□□ -0.32
CLSTN3-201ENST00000266546 POLD1P28340 1107 aa13.05□□□□□ -0.32
CLSTN3-201ENST00000266546 ZNF532Q9HCE3 1301 aa13.05□□□□□ -0.32
CLSTN3-201ENST00000266546 EFCAB8A8MWE9 144 aa13.05□□□□□ -0.32
CLSTN3-201ENST00000266546 AKR1B15C9JRZ8 316 aaPredicted RBP13.05□□□□□ -0.32
CLSTN3-201ENST00000266546 LDHBP07195 334 aaKnown RBP13.05□□□□□ -0.32
CLSTN3-201ENST00000266546 PDE6AP16499 860 aa13.05□□□□□ -0.32
CLSTN3-201ENST00000266546 SYNE4Q8N205 404 aa13.05□□□□□ -0.32
CLSTN3-201ENST00000266546 MBD4O95243 580 aa13.05□□□□□ -0.32
CLSTN3-201ENST00000266546 MATR3P43243 847 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLSTN3-201ENST00000266546 TXNRD1Q16881 649 aa13.05□□□□□ -0.32
CLSTN3-201ENST00000266546 FKBP15Q5T1M5 1219 aa13.05□□□□□ -0.32
CLSTN3-201ENST00000266546 ESR2Q92731 530 aa13.05□□□□□ -0.32
CLSTN3-201ENST00000266546 XIRP1Q702N8 1843 aaKnown RBP13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 STX17P56962 302 aa13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 SPAG1Q07617 926 aa13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 TTLL12Q14166 644 aaPredicted RBP13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 C11orf57Q6ZUT1 292 aaPredicted RBP13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 KCPQ6ZWJ8 1503 aa13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 XDHP47989 1333 aa13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 UFL1O94874 794 aa13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 GRAPQ13588 217 aa13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 SLC10A5Q5PT55 438 aa13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 ADALQ6DHV7 355 aa13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 GRAPLQ8TC17 118 aaPredicted RBP13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 TBC1D22AQ8WUA7 517 aa13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 TAF4BQ92750 862 aa13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 HSPD1P10809 573 aaKnown RBP13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 ZNF804BA4D1E1 1349 aa13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 LRP6O75581 1613 aa13.04□□□□□ -0.32
CLSTN3-201ENST00000266546 GUCA1BQ9UMX6 200 aa13.03□□□□□ -0.32
CLSTN3-201ENST00000266546 ZNF609O15014 1411 aa13.03□□□□□ -0.32
CLSTN3-201ENST00000266546 DNA2P51530 1060 aa13.03□□□□□ -0.32
CLSTN3-201ENST00000266546 NECTIN1Q15223 517 aa13.03□□□□□ -0.32
CLSTN3-201ENST00000266546 TMEM87BQ96K49 555 aa13.03□□□□□ -0.32
CLSTN3-201ENST00000266546 PPP1R13BQ96KQ4 1090 aa13.03□□□□□ -0.32
CLSTN3-201ENST00000266546 UBN2Q6ZU65 1347 aa13.03□□□□□ -0.32
CLSTN3-201ENST00000266546 ADD2P35612 726 aa13.03□□□□□ -0.32
CLSTN3-201ENST00000266546 BCAMP50895 628 aa13.03□□□□□ -0.32
CLSTN3-201ENST00000266546 DHX37Q8IY37 1157 aaKnown RBP13.03□□□□□ -0.32
CLSTN3-201ENST00000266546 COL22A1Q8NFW1 1626 aaPredicted RBP13.03□□□□□ -0.32
CLSTN3-201ENST00000266546 GOLGA6L7A0A1B0GV03 622 aa13.02□□□□□ -0.32
CLSTN3-201ENST00000266546 CNGA4Q8IV77 575 aa13.02□□□□□ -0.32
CLSTN3-201ENST00000266546 MKNK2Q9HBH9 465 aa13.02□□□□□ -0.32
CLSTN3-201ENST00000266546 RPAP1Q9BWH6 1393 aaPredicted RBP13.02□□□□□ -0.32
CLSTN3-201ENST00000266546 H0YIN7 160 aa13.02□□□□□ -0.32
CLSTN3-201ENST00000266546 RRAGBQ5VZM2 374 aa13.02□□□□□ -0.32
CLSTN3-201ENST00000266546 DHX58Q96C10 678 aa13.02□□□□□ -0.32
CLSTN3-201ENST00000266546 RTL9Q8NET4 1388 aa13.02□□□□□ -0.33
CLSTN3-201ENST00000266546 A0A087WWV3 80 aa13.02□□□□□ -0.33
CLSTN3-201ENST00000266546 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.33
CLSTN3-201ENST00000266546 NFE2L3Q9Y4A8 694 aa13.02□□□□□ -0.33
CLSTN3-201ENST00000266546 COL16A1Q07092 1604 aaPredicted RBP13.02□□□□□ -0.33
CLSTN3-201ENST00000266546 TRIM21P19474 475 aaKnown RBP13.02□□□□□ -0.33
CLSTN3-201ENST00000266546 RXRAP19793 462 aa13.02□□□□□ -0.33
CLSTN3-201ENST00000266546 ARID4AP29374 1257 aaPredicted RBP13.02□□□□□ -0.33
CLSTN3-201ENST00000266546 CYLC1P35663 651 aaPredicted RBP13.02□□□□□ -0.33
CLSTN3-201ENST00000266546 ARID5BQ14865 1188 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms