RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 GADD45BO75293 160 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-201ENST00000265810 STAT6P42226 847 aa16.51■□□□□ 0.23
PDLIM2-201ENST00000265810 CIAPIN1Q6FI81 312 aa16.51■□□□□ 0.23
PDLIM2-201ENST00000265810 FCHSD1Q86WN1 690 aa16.51■□□□□ 0.23
PDLIM2-201ENST00000265810 NSUN7Q8NE18 718 aaKnown RBP16.51■□□□□ 0.23
PDLIM2-201ENST00000265810 ZNF512BQ96KM6 892 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-201ENST00000265810 DCP1AQ9NPI6 582 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-201ENST00000265810 ZNF609O15014 1411 aa16.51■□□□□ 0.23
PDLIM2-201ENST00000265810 CBFA2T2O43439 604 aa16.51■□□□□ 0.23
PDLIM2-201ENST00000265810 TOP1P11387 765 aaKnown RBP16.51■□□□□ 0.23
PDLIM2-201ENST00000265810 AMPD3Q01432 767 aa16.51■□□□□ 0.23
PDLIM2-201ENST00000265810 ICA1Q05084 483 aa16.5■□□□□ 0.23
PDLIM2-201ENST00000265810 DTHD1Q6ZMT9 781 aa16.5■□□□□ 0.23
PDLIM2-201ENST00000265810 NSUN4Q96CB9 384 aaKnown RBP16.5■□□□□ 0.23
PDLIM2-201ENST00000265810 LRRC4BQ9NT99 713 aa16.5■□□□□ 0.23
PDLIM2-201ENST00000265810 KLRK1P26718 216 aa16.5■□□□□ 0.23
PDLIM2-201ENST00000265810 CRKP46108 304 aa16.5■□□□□ 0.23
PDLIM2-201ENST00000265810 DPY19L2Q6NUT2 758 aa16.5■□□□□ 0.23
PDLIM2-201ENST00000265810 UBA5Q9GZZ9 404 aa16.5■□□□□ 0.23
PDLIM2-201ENST00000265810 PPFIBP1Q86W92 1011 aa16.5■□□□□ 0.23
PDLIM2-201ENST00000265810 FBXO33Q7Z6M2 555 aa16.5■□□□□ 0.23
PDLIM2-201ENST00000265810 KIF2CQ99661 725 aa16.5■□□□□ 0.23
PDLIM2-201ENST00000265810 DDAH1O94760 285 aa16.49■□□□□ 0.23
PDLIM2-201ENST00000265810 ABCB5Q2M3G0 1257 aa16.49■□□□□ 0.23
PDLIM2-201ENST00000265810 CPXCR1Q8N123 301 aa16.49■□□□□ 0.23
PDLIM2-201ENST00000265810 HOOK2Q96ED9 719 aa16.49■□□□□ 0.23
PDLIM2-201ENST00000265810 RPAP1Q9BWH6 1393 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-201ENST00000265810 TOB2Q14106 344 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-201ENST00000265810 USH1GQ495M9 461 aa16.49■□□□□ 0.23
PDLIM2-201ENST00000265810 MYSM1Q5VVJ2 828 aa16.49■□□□□ 0.23
PDLIM2-201ENST00000265810 CCDC17Q96LX7 622 aa16.49■□□□□ 0.23
PDLIM2-201ENST00000265810 LMBRD1Q9NUN5 540 aa16.49■□□□□ 0.23
PDLIM2-201ENST00000265810 EAPPQ56P03 285 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-201ENST00000265810 FBXO18Q8NFZ0 1043 aa16.49■□□□□ 0.23
PDLIM2-201ENST00000265810 R3HCC1Q9Y3T6 440 aaKnown RBP16.49■□□□□ 0.23
PDLIM2-201ENST00000265810 ANO6Q4KMQ2 910 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 PLIN2Q99541 437 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 MROH7-TTC4A0A0A0MT08 1334 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 NEDD4P46934 1319 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 BTBD18B2RXH4 712 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 CDK8P49336 464 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 CHMP4BP1P59074 171 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 GRM1Q13255 1194 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 SPECC1Q5M775 1068 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 FAM43AQ8N2R8 423 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 TDRD3Q9H7E2 651 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 ROBO1Q9Y6N7 1651 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 LIFRP42702 1097 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 TTC38Q5R3I4 469 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 CCAR2Q8N163 923 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 STAG1Q8WVM7 1258 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 SWAP70Q9UH65 585 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 SALL3Q9BXA9 1300 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 GDF11O95390 407 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 GPKOWQ92917 476 aaPredicted RBP eCLIP16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 PI4KBQ9UBF8 816 aa16.48■□□□□ 0.23
PDLIM2-201ENST00000265810 LRP10Q7Z4F1 713 aa16.47■□□□□ 0.23
PDLIM2-201ENST00000265810 USP28Q96RU2 1077 aa16.47■□□□□ 0.23
PDLIM2-201ENST00000265810 ALX1Q15699 326 aa16.47■□□□□ 0.23
PDLIM2-201ENST00000265810 RRAGBQ5VZM2 374 aa16.47■□□□□ 0.23
PDLIM2-201ENST00000265810 CYB5R4Q7L1T6 521 aa16.47■□□□□ 0.23
PDLIM2-201ENST00000265810 SLC44A5Q8NCS7 719 aa16.47■□□□□ 0.23
PDLIM2-201ENST00000265810 ERMNQ8TAM6 284 aa16.47■□□□□ 0.23
PDLIM2-201ENST00000265810 CEP89Q96ST8 783 aa16.47■□□□□ 0.23
PDLIM2-201ENST00000265810 DNAJC25Q9H1X3 360 aa16.47■□□□□ 0.23
PDLIM2-201ENST00000265810 DHX36Q9H2U1 1008 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-201ENST00000265810 PHLPP1O60346 1717 aa16.47■□□□□ 0.23
PDLIM2-201ENST00000265810 SMCO2A6NFE2 343 aa16.47■□□□□ 0.23
PDLIM2-201ENST00000265810 PLSCR1O15162 318 aa16.47■□□□□ 0.23
PDLIM2-201ENST00000265810 TMOD4Q9NZQ9 345 aa16.47■□□□□ 0.23
PDLIM2-201ENST00000265810 SCG2P13521 617 aa16.46■□□□□ 0.23
PDLIM2-201ENST00000265810 ADCY7P51828 1080 aa16.46■□□□□ 0.23
PDLIM2-201ENST00000265810 FAM160A1Q05DH4 1040 aa16.46■□□□□ 0.23
PDLIM2-201ENST00000265810 KRT79Q5XKE5 535 aa16.46■□□□□ 0.23
PDLIM2-201ENST00000265810 SLFN13Q68D06 897 aa16.46■□□□□ 0.23
PDLIM2-201ENST00000265810 STOX1Q6ZVD7 989 aa16.46■□□□□ 0.23
PDLIM2-201ENST00000265810 KIFC2Q96AC6 838 aa16.46■□□□□ 0.23
PDLIM2-201ENST00000265810 GOPCQ9HD26 462 aa16.46■□□□□ 0.23
PDLIM2-201ENST00000265810 CCNT1O60563 726 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-201ENST00000265810 CTR9Q6PD62 1173 aa16.46■□□□□ 0.23
PDLIM2-201ENST00000265810 TTC14Q96N46 770 aa16.46■□□□□ 0.23
PDLIM2-201ENST00000265810 NONOQ15233 471 aaKnown RBP eCLIP16.46■□□□□ 0.23
PDLIM2-201ENST00000265810 TMED8Q6PL24 325 aaPredicted RBP16.46■□□□□ 0.23
PDLIM2-201ENST00000265810 NAP1L1P55209 391 aaKnown RBP16.46■□□□□ 0.22
PDLIM2-201ENST00000265810 PNPLA7Q6ZV29 1317 aa16.46■□□□□ 0.22
PDLIM2-201ENST00000265810 ECM2O94769 699 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-201ENST00000265810 TYRO3Q06418 890 aa16.45■□□□□ 0.22
PDLIM2-201ENST00000265810 CCDC174Q6PII3 467 aa16.45■□□□□ 0.22
PDLIM2-201ENST00000265810 NOSTRINQ8IVI9 506 aa16.45■□□□□ 0.22
PDLIM2-201ENST00000265810 FGFR2P21802 821 aa16.45■□□□□ 0.22
PDLIM2-201ENST00000265810 MIGA2Q7L4E1 593 aa16.45■□□□□ 0.22
PDLIM2-201ENST00000265810 TXNRD3Q86VQ6 643 aa16.45■□□□□ 0.22
PDLIM2-201ENST00000265810 MB21D2Q8IYB1 491 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-201ENST00000265810 SPICE1Q8N0Z3 855 aa16.45■□□□□ 0.22
PDLIM2-201ENST00000265810 CAVIN2O95810 425 aa16.45■□□□□ 0.22
PDLIM2-201ENST00000265810 TTLL1O95922 423 aa16.45■□□□□ 0.22
PDLIM2-201ENST00000265810 REXO1Q8N1G1 1221 aaKnown RBP16.45■□□□□ 0.22
PDLIM2-201ENST00000265810 DCAF15Q66K64 600 aa16.45■□□□□ 0.22
PDLIM2-201ENST00000265810 SLC16A10Q8TF71 515 aa16.45■□□□□ 0.22
PDLIM2-201ENST00000265810 KRT25Q7Z3Z0 450 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms