RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 CDC5LQ99459 802 aaKnown RBP14.11□□□□□ -0.15
CHMP3-201ENST00000263856 SUGCTQ9HAC7 445 aa14.11□□□□□ -0.15
CHMP3-201ENST00000263856 TPM1P09493 284 aa14.11□□□□□ -0.15
CHMP3-201ENST00000263856 CASP14P31944 242 aa14.11□□□□□ -0.15
CHMP3-201ENST00000263856 IRX5P78411 483 aaPredicted RBP14.11□□□□□ -0.15
CHMP3-201ENST00000263856 RAD9BQ6WBX8 426 aa14.11□□□□□ -0.15
CHMP3-201ENST00000263856 FAM53CQ9NYF3 392 aa14.11□□□□□ -0.15
CHMP3-201ENST00000263856 KIF1AQ12756 1690 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 PATL2C9JE40 543 aaKnown RBP14.1□□□□□ -0.15
CHMP3-201ENST00000263856 BCAMP50895 628 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 MAP3K9P80192 1104 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 RASGRF1Q13972 1273 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 UBE3CQ15386 1083 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 RILPL1Q5EBL4 403 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 GPR161Q8N6U8 529 aaKnown RBP14.1□□□□□ -0.15
CHMP3-201ENST00000263856 RASSF8Q8NHQ8 419 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 NACAP1Q9BZK3 213 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 PHRF1Q9P1Y6 1649 aaKnown RBP14.1□□□□□ -0.15
CHMP3-201ENST00000263856 CYP2D7A0A087X1C5 515 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 GOLGA6L9A6NEM1 432 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 STARD3NLO95772 234 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 PTPREP23469 700 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 NOM1Q5C9Z4 860 aaKnown RBP14.1□□□□□ -0.15
CHMP3-201ENST00000263856 NLRP10Q86W26 655 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 EEF2KMTQ96G04 330 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 MED15Q96RN5 788 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 NUP88Q99567 741 aaPredicted RBP14.1□□□□□ -0.15
CHMP3-201ENST00000263856 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.1□□□□□ -0.15
CHMP3-201ENST00000263856 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.1□□□□□ -0.15
CHMP3-201ENST00000263856 VPS18Q9P253 973 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 RIC1Q4ADV7 1423 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 ERVV-2B6SEH9 535 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 GPS2Q13227 327 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 LONRF2Q1L5Z9 754 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 FILIP1LQ4L180 1135 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 ZNF654Q8IZM8 581 aa14.1□□□□□ -0.15
CHMP3-201ENST00000263856 A0A087X0B3 334 aa14.09□□□□□ -0.15
CHMP3-201ENST00000263856 CD44P16070 742 aaKnown RBP14.09□□□□□ -0.15
CHMP3-201ENST00000263856 IFNAR1P17181 557 aa14.09□□□□□ -0.15
CHMP3-201ENST00000263856 JAKMIP3Q5VZ66 844 aa14.09□□□□□ -0.15
CHMP3-201ENST00000263856 ENOX1Q8TC92 643 aaKnown RBP14.09□□□□□ -0.15
CHMP3-201ENST00000263856 SYMPKQ92797 1274 aaKnown RBP14.09□□□□□ -0.15
CHMP3-201ENST00000263856 CCDC102AQ96A19 550 aa14.09□□□□□ -0.15
CHMP3-201ENST00000263856 TMEM94Q12767 1356 aa14.09□□□□□ -0.15
CHMP3-201ENST00000263856 TRIM75PA6NK02 468 aa14.09□□□□□ -0.15
CHMP3-201ENST00000263856 N4BP3O15049 544 aa14.09□□□□□ -0.15
CHMP3-201ENST00000263856 DEXIO95424 95 aa14.09□□□□□ -0.15
CHMP3-201ENST00000263856 ABL1P00519 1130 aa14.09□□□□□ -0.15
CHMP3-201ENST00000263856 PLCD1P51178 756 aa14.09□□□□□ -0.15
CHMP3-201ENST00000263856 MDM2Q00987 491 aaPredicted RBP14.09□□□□□ -0.15
CHMP3-201ENST00000263856 MORC3Q14149 939 aa14.09□□□□□ -0.15
CHMP3-201ENST00000263856 EARS2Q5JPH6 523 aaKnown RBP14.09□□□□□ -0.15
CHMP3-201ENST00000263856 SLC35F6Q8N357 371 aa14.09□□□□□ -0.15
CHMP3-201ENST00000263856 KRT23Q9C075 422 aa14.09□□□□□ -0.15
CHMP3-201ENST00000263856 TAB2Q9NYJ8 693 aa14.09□□□□□ -0.15
CHMP3-201ENST00000263856 ZBTB1Q9Y2K1 713 aa14.09□□□□□ -0.15
CHMP3-201ENST00000263856 V9GY48 417 aaPredicted RBP14.09□□□□□ -0.15
CHMP3-201ENST00000263856 SLC5A1P13866 664 aa14.08□□□□□ -0.15
CHMP3-201ENST00000263856 RRAGBQ5VZM2 374 aa14.08□□□□□ -0.15
CHMP3-201ENST00000263856 GIGYF2Q6Y7W6 1299 aaKnown RBP14.08□□□□□ -0.15
CHMP3-201ENST00000263856 FCHSD1Q86WN1 690 aa14.08□□□□□ -0.15
CHMP3-201ENST00000263856 GPIHBP1Q8IV16 184 aa14.08□□□□□ -0.15
CHMP3-201ENST00000263856 PDE11AQ9HCR9 933 aa14.08□□□□□ -0.15
CHMP3-201ENST00000263856 CEP131Q9UPN4 1083 aa14.08□□□□□ -0.15
CHMP3-201ENST00000263856 GSG1L2A8MUP6 293 aa14.08□□□□□ -0.16
CHMP3-201ENST00000263856 CSF1RP07333 972 aa14.08□□□□□ -0.16
CHMP3-201ENST00000263856 TBX2Q13207 712 aaPredicted RBP14.08□□□□□ -0.16
CHMP3-201ENST00000263856 PUM3Q15397 648 aaKnown RBP14.08□□□□□ -0.16
CHMP3-201ENST00000263856 FANCBQ8NB91 859 aa14.08□□□□□ -0.16
CHMP3-201ENST00000263856 KIFC2Q96AC6 838 aa14.08□□□□□ -0.16
CHMP3-201ENST00000263856 HINFPQ9BQA5 517 aa14.08□□□□□ -0.16
CHMP3-201ENST00000263856 MAP3K15Q6ZN16 1313 aa14.08□□□□□ -0.16
CHMP3-201ENST00000263856 WDR19Q8NEZ3 1342 aa14.08□□□□□ -0.16
CHMP3-201ENST00000263856 ACTN4O43707 911 aaKnown RBP14.08□□□□□ -0.16
CHMP3-201ENST00000263856 UQCRFS1P1P0C7P4 283 aa14.08□□□□□ -0.16
CHMP3-201ENST00000263856 SGMS1Q86VZ5 419 aa14.08□□□□□ -0.16
CHMP3-201ENST00000263856 CRACR2BQ8N4Y2 399 aaPredicted RBP14.08□□□□□ -0.16
CHMP3-201ENST00000263856 GDAP1L1Q96MZ0 367 aa14.08□□□□□ -0.16
CHMP3-201ENST00000263856 PLIN2Q99541 437 aa14.08□□□□□ -0.16
CHMP3-201ENST00000263856 SLF1Q9BQI6 1058 aa14.08□□□□□ -0.16
CHMP3-201ENST00000263856 CNNM2Q9H8M5 875 aa14.08□□□□□ -0.16
CHMP3-201ENST00000263856 TNKSO95271 1327 aa14.07□□□□□ -0.16
CHMP3-201ENST00000263856 WNT7AO00755 349 aa14.07□□□□□ -0.16
CHMP3-201ENST00000263856 ZNF18P17022 549 aa14.07□□□□□ -0.16
CHMP3-201ENST00000263856 CYP7A1P22680 504 aa14.07□□□□□ -0.16
CHMP3-201ENST00000263856 PIGBQ92521 554 aa14.07□□□□□ -0.16
CHMP3-201ENST00000263856 TXLNAP40222 546 aa14.07□□□□□ -0.16
CHMP3-201ENST00000263856 LIFRP42702 1097 aa14.07□□□□□ -0.16
CHMP3-201ENST00000263856 GUCA1BQ9UMX6 200 aa14.07□□□□□ -0.16
CHMP3-201ENST00000263856 TFR2Q9UP52 801 aa14.07□□□□□ -0.16
CHMP3-201ENST00000263856 C4AP0C0L4 1744 aa14.07□□□□□ -0.16
CHMP3-201ENST00000263856 C4BP0C0L5 1744 aa14.07□□□□□ -0.16
CHMP3-201ENST00000263856 TJP1Q07157 1748 aa14.07□□□□□ -0.16
CHMP3-201ENST00000263856 WDR17Q8IZU2 1322 aa14.07□□□□□ -0.16
CHMP3-201ENST00000263856 TCRBV5S4A2TA0A5A2 114 aa14.06□□□□□ -0.16
CHMP3-201ENST00000263856 H3BQF6 201 aa14.06□□□□□ -0.16
CHMP3-201ENST00000263856 PLEKHA8P1O95397 391 aa14.06□□□□□ -0.16
CHMP3-201ENST00000263856 XBP1P17861 261 aa14.06□□□□□ -0.16
CHMP3-201ENST00000263856 FXR1P51114 621 aaKnown RBP eCLIP14.06□□□□□ -0.16
CHMP3-201ENST00000263856 NR1I3Q14994 352 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms