RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 PPP2R3AQ06190 1150 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 AKNAD1Q5T1N1 836 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 SPECC1LQ69YQ0 1117 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 MFSD6Q6ZSS7 791 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 PLA2G12BQ9BX93 195 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 BLZF1Q9H2G9 400 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 PATL2C9JE40 543 aaKnown RBP18.9■□□□□ 0.62
ZNF541-201ENST00000263351 RNF225M0QZC1 329 aaPredicted RBP18.9■□□□□ 0.62
ZNF541-201ENST00000263351 KCNJ6P48051 423 aa18.9■□□□□ 0.62
ZNF541-201ENST00000263351 EVA1CP58658 441 aa18.9■□□□□ 0.62
ZNF541-201ENST00000263351 MORC3Q14149 939 aa18.9■□□□□ 0.62
ZNF541-201ENST00000263351 CCDC12Q8WUD4 166 aaPredicted RBP18.9■□□□□ 0.62
ZNF541-201ENST00000263351 ZFP91Q96JP5 570 aaPredicted RBP18.9■□□□□ 0.62
ZNF541-201ENST00000263351 TNS2Q63HR2 1409 aa18.9■□□□□ 0.62
ZNF541-201ENST00000263351 COL5A2P05997 1499 aaPredicted RBP18.9■□□□□ 0.62
ZNF541-201ENST00000263351 PLEKHA8P1O95397 391 aa18.9■□□□□ 0.62
ZNF541-201ENST00000263351 RBL2Q08999 1139 aa18.9■□□□□ 0.62
ZNF541-201ENST00000263351 WTAPQ15007 396 aa18.9■□□□□ 0.62
ZNF541-201ENST00000263351 WWC2Q6AWC2 1192 aa18.9■□□□□ 0.62
ZNF541-201ENST00000263351 SLIT2O94813 1529 aa18.9■□□□□ 0.62
ZNF541-201ENST00000263351 WDR19Q8NEZ3 1342 aa18.9■□□□□ 0.62
ZNF541-201ENST00000263351 IFNAR1P17181 557 aa18.89■□□□□ 0.62
ZNF541-201ENST00000263351 CCT6AP40227 531 aaKnown RBP18.89■□□□□ 0.62
ZNF541-201ENST00000263351 TRIM28Q13263 835 aaKnown RBP18.89■□□□□ 0.62
ZNF541-201ENST00000263351 NKX1-1Q15270 411 aaPredicted RBP18.89■□□□□ 0.62
ZNF541-201ENST00000263351 PARD6BQ9BYG5 372 aa18.89■□□□□ 0.62
ZNF541-201ENST00000263351 RAI14Q9P0K7 980 aa18.89■□□□□ 0.62
ZNF541-201ENST00000263351 MAPK8IP1Q9UQF2 711 aa18.89■□□□□ 0.62
ZNF541-201ENST00000263351 ARID4AP29374 1257 aaPredicted RBP18.89■□□□□ 0.61
ZNF541-201ENST00000263351 SARSP49591 514 aaKnown RBP18.89■□□□□ 0.61
ZNF541-201ENST00000263351 APTXQ7Z2E3 356 aaKnown RBP18.89■□□□□ 0.61
ZNF541-201ENST00000263351 CRACR2BQ8N4Y2 399 aaPredicted RBP18.89■□□□□ 0.61
ZNF541-201ENST00000263351 TFR2Q9UP52 801 aa18.89■□□□□ 0.61
ZNF541-201ENST00000263351 MRFAP1Q9Y605 127 aa18.89■□□□□ 0.61
ZNF541-201ENST00000263351 ZNF174Q15697 407 aa18.88■□□□□ 0.61
ZNF541-201ENST00000263351 CC2D1AQ6P1N0 951 aaPredicted RBP18.88■□□□□ 0.61
ZNF541-201ENST00000263351 ACRBPQ8NEB7 543 aa18.88■□□□□ 0.61
ZNF541-201ENST00000263351 ABCF2Q9UG63 623 aa18.88■□□□□ 0.61
ZNF541-201ENST00000263351 MAP3K9P80192 1104 aa18.88■□□□□ 0.61
ZNF541-201ENST00000263351 ZNF654Q8IZM8 581 aa18.88■□□□□ 0.61
ZNF541-201ENST00000263351 COL4A1P02462 1669 aa18.88■□□□□ 0.61
ZNF541-201ENST00000263351 NMT2O60551 498 aa18.88■□□□□ 0.61
ZNF541-201ENST00000263351 FGFR2P21802 821 aa18.88■□□□□ 0.61
ZNF541-201ENST00000263351 OAS2P29728 719 aaKnown RBP18.88■□□□□ 0.61
ZNF541-201ENST00000263351 TTF1Q15361 905 aaPredicted RBP18.88■□□□□ 0.61
ZNF541-201ENST00000263351 EEF2KMTQ96G04 330 aa18.88■□□□□ 0.61
ZNF541-201ENST00000263351 CDC5LQ99459 802 aaKnown RBP18.88■□□□□ 0.61
ZNF541-201ENST00000263351 ATRNO75882 1429 aa18.87■□□□□ 0.61
ZNF541-201ENST00000263351 LIFRP42702 1097 aa18.87■□□□□ 0.61
ZNF541-201ENST00000263351 PUM3Q15397 648 aaKnown RBP18.87■□□□□ 0.61
ZNF541-201ENST00000263351 SYMPKQ92797 1274 aaKnown RBP18.87■□□□□ 0.61
ZNF541-201ENST00000263351 SHANK3Q9BYB0 1731 aa18.87■□□□□ 0.61
ZNF541-201ENST00000263351 ABCC12Q96J65 1359 aa18.87■□□□□ 0.61
ZNF541-201ENST00000263351 EFCAB8A8MWE9 144 aa18.87■□□□□ 0.61
ZNF541-201ENST00000263351 ZSCAN12O43309 604 aa18.87■□□□□ 0.61
ZNF541-201ENST00000263351 FXR1P51114 621 aaKnown RBP eCLIP18.87■□□□□ 0.61
ZNF541-201ENST00000263351 NR1I3Q14994 352 aa18.87■□□□□ 0.61
ZNF541-201ENST00000263351 SAFBQ15424 915 aaKnown RBP eCLIP18.87■□□□□ 0.61
ZNF541-201ENST00000263351 SMIM5Q71RC9 77 aa18.87■□□□□ 0.61
ZNF541-201ENST00000263351 FANCBQ8NB91 859 aa18.87■□□□□ 0.61
ZNF541-201ENST00000263351 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.86■□□□□ 0.61
ZNF541-201ENST00000263351 PARP4Q9UKK3 1724 aaKnown RBP18.86■□□□□ 0.61
ZNF541-201ENST00000263351 CASP14P31944 242 aa18.86■□□□□ 0.61
ZNF541-201ENST00000263351 HNRNPH2P55795 449 aaKnown RBP18.86■□□□□ 0.61
ZNF541-201ENST00000263351 DYNLL1P63167 89 aaKnown RBP18.86■□□□□ 0.61
ZNF541-201ENST00000263351 SUSD4Q5VX71 490 aa18.86■□□□□ 0.61
ZNF541-201ENST00000263351 H3BQF6 201 aa18.86■□□□□ 0.61
ZNF541-201ENST00000263351 STARD3NLO95772 234 aa18.86■□□□□ 0.61
ZNF541-201ENST00000263351 CYP19A1P11511 503 aaPredicted RBP18.86■□□□□ 0.61
ZNF541-201ENST00000263351 DZIP3Q86Y13 1208 aaKnown RBP18.86■□□□□ 0.61
ZNF541-201ENST00000263351 TRIM22Q8IYM9 498 aa18.86■□□□□ 0.61
ZNF541-201ENST00000263351 IGSF22Q8N9C0 903 aa18.86■□□□□ 0.61
ZNF541-201ENST00000263351 LPIN2Q92539 896 aa18.86■□□□□ 0.61
ZNF541-201ENST00000263351 FBXO3Q9UK99 471 aa18.86■□□□□ 0.61
ZNF541-201ENST00000263351 V9GY48 417 aaPredicted RBP18.86■□□□□ 0.61
ZNF541-201ENST00000263351 TNKSO95271 1327 aa18.85■□□□□ 0.61
ZNF541-201ENST00000263351 CYP2C19P33261 490 aa18.85■□□□□ 0.61
ZNF541-201ENST00000263351 MAP3K12Q12852 859 aa18.85■□□□□ 0.61
ZNF541-201ENST00000263351 PKN1Q16512 942 aa18.85■□□□□ 0.61
ZNF541-201ENST00000263351 CADPS2Q86UW7 1296 aa18.85■□□□□ 0.61
ZNF541-201ENST00000263351 ENOX1Q8TC92 643 aaKnown RBP18.85■□□□□ 0.61
ZNF541-201ENST00000263351 RNF216Q9NWF9 866 aaPredicted RBP18.85■□□□□ 0.61
ZNF541-201ENST00000263351 CHD4Q14839 1912 aa18.85■□□□□ 0.61
ZNF541-201ENST00000263351 PAPPAQ13219 1627 aa18.85■□□□□ 0.61
ZNF541-201ENST00000263351 PDE8AO60658 829 aa18.85■□□□□ 0.61
ZNF541-201ENST00000263351 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.85■□□□□ 0.61
ZNF541-201ENST00000263351 LRP2BPQ9P2M1 347 aa18.85■□□□□ 0.61
ZNF541-201ENST00000263351 TRIM10Q9UDY6 481 aa18.85■□□□□ 0.61
ZNF541-201ENST00000263351 JAG2Q9Y219 1238 aa18.85■□□□□ 0.61
ZNF541-201ENST00000263351 STX10O60499 249 aa18.84■□□□□ 0.61
ZNF541-201ENST00000263351 RSRC2Q7L4I2 434 aaKnown RBP18.84■□□□□ 0.61
ZNF541-201ENST00000263351 PNKPQ96T60 521 aa18.84■□□□□ 0.61
ZNF541-201ENST00000263351 CARD10Q9BWT7 1032 aa18.84■□□□□ 0.61
ZNF541-201ENST00000263351 CTNND2Q9UQB3 1225 aa18.84■□□□□ 0.61
ZNF541-201ENST00000263351 SRPRBQ9Y5M8 271 aaKnown RBP18.84■□□□□ 0.61
ZNF541-201ENST00000263351 MYH2Q9UKX2 1941 aa18.84■□□□□ 0.61
ZNF541-201ENST00000263351 GYG1P46976 350 aa18.84■□□□□ 0.61
ZNF541-201ENST00000263351 PLCD1P51178 756 aa18.84■□□□□ 0.61
ZNF541-201ENST00000263351 TICAM2Q86XR7 235 aa18.84■□□□□ 0.61
ZNF541-201ENST00000263351 PAGE5Q96GU1 130 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms