RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 NMIQ13287 307 aaPredicted RBP13.88□□□□□ -0.19
PFDN1-201ENST00000261813 CASC1Q6TDU7 716 aa13.88□□□□□ -0.19
PFDN1-201ENST00000261813 SAPCD2Q86UD0 394 aa13.88□□□□□ -0.19
PFDN1-201ENST00000261813 ZSCAN29Q8IWY8 852 aaPredicted RBP13.88□□□□□ -0.19
PFDN1-201ENST00000261813 A0A0D9SFI3 127 aa13.87□□□□□ -0.19
PFDN1-201ENST00000261813 USP2O75604 605 aaPredicted RBP13.87□□□□□ -0.19
PFDN1-201ENST00000261813 HSPA8P11142 646 aaKnown RBP13.87□□□□□ -0.19
PFDN1-201ENST00000261813 FKBP1BP68106 108 aa13.87□□□□□ -0.19
PFDN1-201ENST00000261813 TTLL12Q14166 644 aaPredicted RBP13.87□□□□□ -0.19
PFDN1-201ENST00000261813 CCDC129Q6ZRS4 1044 aa13.87□□□□□ -0.19
PFDN1-201ENST00000261813 MIGA2Q7L4E1 593 aa13.87□□□□□ -0.19
PFDN1-201ENST00000261813 CSRNP1Q96S65 589 aa13.87□□□□□ -0.19
PFDN1-201ENST00000261813 DCP1AQ9NPI6 582 aaPredicted RBP13.87□□□□□ -0.19
PFDN1-201ENST00000261813 SAP30BPQ9UHR5 308 aaKnown RBP13.87□□□□□ -0.19
PFDN1-201ENST00000261813 ANGEL1Q9UNK9 670 aaKnown RBP13.87□□□□□ -0.19
PFDN1-201ENST00000261813 SLC4A4Q9Y6R1 1079 aa13.87□□□□□ -0.19
PFDN1-201ENST00000261813 AK9Q5TCS8 1911 aa13.87□□□□□ -0.19
PFDN1-201ENST00000261813 NAV1Q8NEY1 1877 aa13.87□□□□□ -0.19
PFDN1-201ENST00000261813 SIPA1L1O43166 1804 aa13.86□□□□□ -0.19
PFDN1-201ENST00000261813 UBE2Q2LH0YL09 131 aa13.86□□□□□ -0.19
PFDN1-201ENST00000261813 HUNKP57058 714 aa13.86□□□□□ -0.19
PFDN1-201ENST00000261813 MAP3K11Q16584 847 aa13.86□□□□□ -0.19
PFDN1-201ENST00000261813 ARMC9Q7Z3E5 817 aa13.86□□□□□ -0.19
PFDN1-201ENST00000261813 OXER1Q8TDS5 423 aa13.86□□□□□ -0.19
PFDN1-201ENST00000261813 ABHD8Q96I13 439 aa13.86□□□□□ -0.19
PFDN1-201ENST00000261813 HELLSQ9NRZ9 838 aa13.86□□□□□ -0.19
PFDN1-201ENST00000261813 ATP8A2Q9NTI2 1148 aa13.86□□□□□ -0.19
PFDN1-201ENST00000261813 PALD1Q9ULE6 856 aa13.86□□□□□ -0.19
PFDN1-201ENST00000261813 PPP1R12BO60237 982 aaPredicted RBP13.85□□□□□ -0.19
PFDN1-201ENST00000261813 PLCB2Q00722 1185 aa13.85□□□□□ -0.19
PFDN1-201ENST00000261813 MAP3K10Q02779 954 aa13.85□□□□□ -0.19
PFDN1-201ENST00000261813 SLC4A8Q2Y0W8 1093 aa13.85□□□□□ -0.19
PFDN1-201ENST00000261813 LDLRAD1Q5T700 205 aa13.85□□□□□ -0.19
PFDN1-201ENST00000261813 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.85□□□□□ -0.19
PFDN1-201ENST00000261813 HOOK2Q96ED9 719 aa13.85□□□□□ -0.19
PFDN1-201ENST00000261813 DHX36Q9H2U1 1008 aaKnown RBP13.85□□□□□ -0.19
PFDN1-201ENST00000261813 PCDH10Q9P2E7 1040 aa13.85□□□□□ -0.19
PFDN1-201ENST00000261813 FAM196BA6NMK8 535 aa13.84□□□□□ -0.19
PFDN1-201ENST00000261813 GSG1L2A8MUP6 293 aa13.84□□□□□ -0.19
PFDN1-201ENST00000261813 FOXP2O15409 715 aa13.84□□□□□ -0.19
PFDN1-201ENST00000261813 IREB2P48200 963 aaKnown RBP13.84□□□□□ -0.19
PFDN1-201ENST00000261813 MCMDC2Q4G0Z9 681 aa13.84□□□□□ -0.19
PFDN1-201ENST00000261813 DCAF15Q66K64 600 aa13.84□□□□□ -0.19
PFDN1-201ENST00000261813 CWC27Q6UX04 472 aaKnown RBP13.84□□□□□ -0.19
PFDN1-201ENST00000261813 ZNF589Q86UQ0 364 aaPredicted RBP13.84□□□□□ -0.19
PFDN1-201ENST00000261813 KHSRPQ92945 711 aaKnown RBP eCLIP13.84□□□□□ -0.194e-6■■■■□ 20.7
PFDN1-201ENST00000261813 CAPNS2Q96L46 248 aa13.84□□□□□ -0.19
PFDN1-201ENST00000261813 ZNF341Q9BYN7 854 aa13.84□□□□□ -0.19
PFDN1-201ENST00000261813 IL25Q9H293 177 aa13.84□□□□□ -0.19
PFDN1-201ENST00000261813 EPB41L4AQ9HCS5 686 aaPredicted RBP13.84□□□□□ -0.19
PFDN1-201ENST00000261813 DIAPH3Q9NSV4 1193 aa13.84□□□□□ -0.19
PFDN1-201ENST00000261813 OTOFQ9HC10 1997 aa13.84□□□□□ -0.19
PFDN1-201ENST00000261813 MYH1P12882 1939 aa13.84□□□□□ -0.19
PFDN1-201ENST00000261813 POTEB3A0JP26 581 aa13.83□□□□□ -0.19
PFDN1-201ENST00000261813 HIP1O00291 1037 aa13.83□□□□□ -0.19
PFDN1-201ENST00000261813 TBC1D12O60347 775 aa13.83□□□□□ -0.19
PFDN1-201ENST00000261813 CDC45O75419 566 aa13.83□□□□□ -0.19
PFDN1-201ENST00000261813 CYP2D6P10635 497 aa13.83□□□□□ -0.19
PFDN1-201ENST00000261813 GNAT2P19087 354 aa13.83□□□□□ -0.19
PFDN1-201ENST00000261813 PLCD1P51178 756 aa13.83□□□□□ -0.19
PFDN1-201ENST00000261813 GRM1Q13255 1194 aa13.83□□□□□ -0.19
PFDN1-201ENST00000261813 POTEBQ6S5H4 581 aa13.83□□□□□ -0.19
PFDN1-201ENST00000261813 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.83□□□□□ -0.19
PFDN1-201ENST00000261813 METTL16Q86W50 562 aaKnown RBP13.83□□□□□ -0.19
PFDN1-201ENST00000261813 HHIPL1Q96JK4 782 aa13.83□□□□□ -0.19
PFDN1-201ENST00000261813 CLMNQ96JQ2 1002 aa13.83□□□□□ -0.19
PFDN1-201ENST00000261813 WRNIP1Q96S55 665 aa13.83□□□□□ -0.19
PFDN1-201ENST00000261813 DNAJC18Q9H819 358 aa13.83□□□□□ -0.19
PFDN1-201ENST00000261813 MCM9Q9NXL9 1143 aa13.83□□□□□ -0.19
PFDN1-201ENST00000261813 PI4KBQ9UBF8 816 aa13.83□□□□□ -0.19
PFDN1-201ENST00000261813 ZNF112Q9UJU3 913 aa13.83□□□□□ -0.19
PFDN1-201ENST00000261813 PHF20L1A8MW92 1017 aa13.83□□□□□ -0.2
PFDN1-201ENST00000261813 PATL2C9JE40 543 aaKnown RBP13.83□□□□□ -0.2
PFDN1-201ENST00000261813 SMIM22K7EJ46 135 aa13.83□□□□□ -0.2
PFDN1-201ENST00000261813 POLR3DP05423 398 aaPredicted RBP13.83□□□□□ -0.2
PFDN1-201ENST00000261813 HLA-DOAP06340 250 aa13.83□□□□□ -0.2
PFDN1-201ENST00000261813 CHMLP26374 656 aa13.83□□□□□ -0.2
PFDN1-201ENST00000261813 INPP5BP32019 993 aa13.83□□□□□ -0.2
PFDN1-201ENST00000261813 VPS53Q5VIR6 699 aa13.83□□□□□ -0.2
PFDN1-201ENST00000261813 RGMBQ6NW40 437 aa13.83□□□□□ -0.2
PFDN1-201ENST00000261813 CCDC171Q6TFL3 1326 aa13.82□□□□□ -0.2
PFDN1-201ENST00000261813 CYP2D7A0A087X1C5 515 aa13.82□□□□□ -0.2
PFDN1-201ENST00000261813 USP17L12C9JPN9 530 aa13.82□□□□□ -0.2
PFDN1-201ENST00000261813 USP17L21D6R901 530 aa13.82□□□□□ -0.2
PFDN1-201ENST00000261813 MAP3K9P80192 1104 aa13.82□□□□□ -0.2
PFDN1-201ENST00000261813 CAMK2BQ13554 666 aa13.82□□□□□ -0.2
PFDN1-201ENST00000261813 VGLL4Q14135 290 aa13.82□□□□□ -0.2
PFDN1-201ENST00000261813 RRP1BQ14684 758 aaKnown RBP13.82□□□□□ -0.2
PFDN1-201ENST00000261813 CYP4F22Q6NT55 531 aa13.82□□□□□ -0.2
PFDN1-201ENST00000261813 GIMAP6Q6P9H5 292 aa13.82□□□□□ -0.2
PFDN1-201ENST00000261813 CTR9Q6PD62 1173 aa13.82□□□□□ -0.2
PFDN1-201ENST00000261813 TTC6Q86TZ1 520 aa13.82□□□□□ -0.2
PFDN1-201ENST00000261813 FOXP4Q8IVH2 680 aaPredicted RBP13.82□□□□□ -0.2
PFDN1-201ENST00000261813 ANKRD13AQ8IZ07 590 aa13.82□□□□□ -0.2
PFDN1-201ENST00000261813 IFNL3Q8IZI9 196 aa13.82□□□□□ -0.2
PFDN1-201ENST00000261813 ZKSCAN4Q969J2 545 aaPredicted RBP13.82□□□□□ -0.2
PFDN1-201ENST00000261813 BACH2Q9BYV9 841 aa13.82□□□□□ -0.2
PFDN1-201ENST00000261813 EHD4Q9H223 541 aa13.82□□□□□ -0.2
PFDN1-201ENST00000261813 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.82□□□□□ -0.2
PFDN1-201ENST00000261813 HERC5Q9UII4 1024 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms