RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 FBXO41Q8TF61 875 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 LEO1Q8WVC0 666 aaPredicted RBP11.87□□□□□ -0.51
KPNA3-201ENST00000261667 ITFG2Q969R8 447 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 AIDAQ96BJ3 306 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 IL17RAQ96F46 866 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 NEUROD6Q96NK8 337 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 HELLSQ9NRZ9 838 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 UTP6Q9NYH9 597 aaKnown RBP11.87□□□□□ -0.51
KPNA3-201ENST00000261667 TSPYL4Q9UJ04 414 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 CEP131Q9UPN4 1083 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 DIAPH2O60879 1101 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 GNAT1P11488 350 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 PSMB7Q99436 277 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 FTOQ9C0B1 505 aaKnown RBP eCLIP11.87□□□□□ -0.51
KPNA3-201ENST00000261667 NKIRAS1Q9NYS0 192 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 EVI5O60447 810 aa11.86□□□□□ -0.51
KPNA3-201ENST00000261667 TMPOP42166 694 aaKnown RBP11.86□□□□□ -0.51
KPNA3-201ENST00000261667 CENPKQ9BS16 269 aa11.86□□□□□ -0.51
KPNA3-201ENST00000261667 FHOD1Q9Y613 1164 aa11.86□□□□□ -0.51
KPNA3-201ENST00000261667 FLOT1O75955 427 aa11.86□□□□□ -0.51
KPNA3-201ENST00000261667 STX17P56962 302 aa11.86□□□□□ -0.51
KPNA3-201ENST00000261667 PLEKHM2Q8IWE5 1019 aa11.86□□□□□ -0.51
KPNA3-201ENST00000261667 SELENOOQ9BVL4 669 aa11.86□□□□□ -0.51
KPNA3-201ENST00000261667 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.86□□□□□ -0.51
KPNA3-201ENST00000261667 GLRX3O76003 335 aaKnown RBP11.86□□□□□ -0.51
KPNA3-201ENST00000261667 NUTM2AQ8IVF1 878 aaPredicted RBP11.86□□□□□ -0.51
KPNA3-201ENST00000261667 XAB2Q9HCS7 855 aaKnown RBP11.86□□□□□ -0.51
KPNA3-201ENST00000261667 PALMDQ9NP74 551 aa11.86□□□□□ -0.51
KPNA3-201ENST00000261667 RGL1Q9NZL6 768 aa11.86□□□□□ -0.51
KPNA3-201ENST00000261667 TNRQ92752 1358 aa11.86□□□□□ -0.51
KPNA3-201ENST00000261667 TOPAZ1Q8N9V7 1692 aa11.86□□□□□ -0.51
KPNA3-201ENST00000261667 SPECC1L-ADORA2AF8WAN1 911 aa11.86□□□□□ -0.51
KPNA3-201ENST00000261667 MARCKSP29966 332 aaPredicted RBP11.86□□□□□ -0.51
KPNA3-201ENST00000261667 SPAG1Q07617 926 aa11.86□□□□□ -0.51
KPNA3-201ENST00000261667 NNTQ13423 1086 aa11.86□□□□□ -0.51
KPNA3-201ENST00000261667 BAG2O95816 211 aa11.85□□□□□ -0.51
KPNA3-201ENST00000261667 AMPHP49418 695 aa11.85□□□□□ -0.51
KPNA3-201ENST00000261667 CCDC80Q76M96 950 aa11.85□□□□□ -0.51
KPNA3-201ENST00000261667 SMC1BQ8NDV3 1235 aa11.85□□□□□ -0.51
KPNA3-201ENST00000261667 ZCRB1Q8TBF4 217 aaKnown RBP11.85□□□□□ -0.51
KPNA3-201ENST00000261667 SLF1Q9BQI6 1058 aa11.85□□□□□ -0.51
KPNA3-201ENST00000261667 KLHL14Q9P2G3 628 aa11.85□□□□□ -0.51
KPNA3-201ENST00000261667 STXBP3O00186 592 aa11.85□□□□□ -0.51
KPNA3-201ENST00000261667 PDE1AP54750 535 aa11.85□□□□□ -0.51
KPNA3-201ENST00000261667 RNASE9P60153 205 aaKnown RBP11.85□□□□□ -0.51
KPNA3-201ENST00000261667 ARMC3Q5W041 872 aa11.85□□□□□ -0.51
KPNA3-201ENST00000261667 NANOGNBQ7Z5D8 188 aa11.85□□□□□ -0.51
KPNA3-201ENST00000261667 NSMCE1Q8WV22 266 aa11.85□□□□□ -0.51
KPNA3-201ENST00000261667 TEKT4Q8WW24 435 aa11.85□□□□□ -0.51
KPNA3-201ENST00000261667 DNAJC5Q9H3Z4 198 aa11.85□□□□□ -0.51
KPNA3-201ENST00000261667 PFDN4Q9NQP4 134 aa11.85□□□□□ -0.51
KPNA3-201ENST00000261667 ZC4H2Q9NQZ6 224 aa11.85□□□□□ -0.51
KPNA3-201ENST00000261667 ADAMTS13Q76LX8 1427 aa11.85□□□□□ -0.51
KPNA3-201ENST00000261667 CTNNA1P35221 906 aaKnown RBP11.85□□□□□ -0.51
KPNA3-201ENST00000261667 NR1I2O75469 434 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 PARP1P09874 1014 aaKnown RBP11.84□□□□□ -0.51
KPNA3-201ENST00000261667 TMED10P49755 219 aaKnown RBP11.84□□□□□ -0.51
KPNA3-201ENST00000261667 OLFML1Q6UWY5 402 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 ARHGAP24Q8N264 748 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 PLEKHG2Q9H7P9 1386 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 SPTLC2O15270 562 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 TROVE2P10155 538 aaKnown RBP eCLIP11.84□□□□□ -0.51
KPNA3-201ENST00000261667 HOOK2Q96ED9 719 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 ZNF692Q9BU19 519 aaPredicted RBP11.84□□□□□ -0.51
KPNA3-201ENST00000261667 HAUS2Q9NVX0 235 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 INTUQ9ULD6 942 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 IKBKGQ9Y6K9 419 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 RIMS1Q86UR5 1692 aaKnown RBP11.84□□□□□ -0.51
KPNA3-201ENST00000261667 TADA3O75528 432 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 FERP16591 822 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 CTCFP49711 727 aaPredicted RBP11.84□□□□□ -0.51
KPNA3-201ENST00000261667 APBA1Q02410 837 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 KCNB1Q14721 858 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 SOGA3Q5TF21 947 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 ZC3H18Q86VM9 953 aaKnown RBP11.84□□□□□ -0.51
KPNA3-201ENST00000261667 TMTC1Q8IUR5 882 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 AMOTL1Q8IY63 956 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 CCDC43Q96MW1 224 aaKnown RBP11.84□□□□□ -0.51
KPNA3-201ENST00000261667 CCDC77Q9BR77 488 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 SPINK5Q9NQ38 1064 aaPredicted RBP11.84□□□□□ -0.51
KPNA3-201ENST00000261667 XRN1Q8IZH2 1706 aaKnown RBP11.84□□□□□ -0.51
KPNA3-201ENST00000261667 NR1D1P20393 614 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 SEPT2Q15019 361 aa11.84□□□□□ -0.51
KPNA3-201ENST00000261667 EEF2P13639 858 aaKnown RBP11.83□□□□□ -0.52
KPNA3-201ENST00000261667 GGCXP38435 758 aa11.83□□□□□ -0.52
KPNA3-201ENST00000261667 PSME1Q06323 249 aa11.83□□□□□ -0.52
KPNA3-201ENST00000261667 AACSQ86V21 672 aa11.83□□□□□ -0.52
KPNA3-201ENST00000261667 CCDC25Q86WR0 208 aa11.83□□□□□ -0.52
KPNA3-201ENST00000261667 MGARPQ8TDB4 240 aa11.83□□□□□ -0.52
KPNA3-201ENST00000261667 DYDC2Q96IM9 177 aa11.83□□□□□ -0.52
KPNA3-201ENST00000261667 PRAM1Q96QH2 718 aa11.83□□□□□ -0.52
KPNA3-201ENST00000261667 DNAI2Q9GZS0 605 aa11.83□□□□□ -0.52
KPNA3-201ENST00000261667 ZBTB40Q9NUA8 1239 aa11.83□□□□□ -0.52
KPNA3-201ENST00000261667 AKAP12Q02952 1782 aa11.83□□□□□ -0.52
KPNA3-201ENST00000261667 TMEM2Q9UHN6 1383 aa11.83□□□□□ -0.52
KPNA3-201ENST00000261667 CPA1P15085 419 aa11.83□□□□□ -0.52
KPNA3-201ENST00000261667 LRRC31Q6UY01 552 aa11.83□□□□□ -0.52
KPNA3-201ENST00000261667 CYP26C1Q6V0L0 522 aa11.83□□□□□ -0.52
KPNA3-201ENST00000261667 VPS36Q86VN1 386 aa11.83□□□□□ -0.52
KPNA3-201ENST00000261667 FCHSD1Q86WN1 690 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms