RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 CCDC42Q96M95 316 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 TMEM2Q9UHN6 1383 aa11.41□□□□□ -0.58
PALB2-201ENST00000261584 TRIM49BA6NDI0 452 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 BUB1O43683 1085 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 PHKG2P15735 406 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 CDC25BP30305 580 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 TYW1BQ6NUM6 668 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 SARM1Q6SZW1 724 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 METTL16Q86W50 562 aaKnown RBP11.4□□□□□ -0.58
PALB2-201ENST00000261584 TICAM2Q86XR7 235 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.4□□□□□ -0.58
PALB2-201ENST00000261584 PIH1D3Q9NQM4 214 aaKnown RBP11.4□□□□□ -0.58
PALB2-201ENST00000261584 TFCP2L1Q9NZI6 479 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 G3V3G9 751 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 HOXB7P09629 217 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 GOLGA8HP0CJ92 632 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 LETM2Q2VYF4 491 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 DCAF8Q5TAQ9 597 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 SMIM5Q71RC9 77 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 NELFBQ8WX92 580 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 SMARCAL1Q9NZC9 954 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 ZFYVE27Q5T4F4 411 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 MARCH10Q8NA82 808 aaPredicted RBP11.4□□□□□ -0.58
PALB2-201ENST00000261584 PROCA1Q8NCQ7 364 aaPredicted RBP11.4□□□□□ -0.58
PALB2-201ENST00000261584 SIRT1Q96EB6 747 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 POLR3EQ9NVU0 708 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 GDAQ9Y2T3 454 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 FHOD1Q9Y613 1164 aa11.4□□□□□ -0.58
PALB2-201ENST00000261584 GYG1P46976 350 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 MAP9Q49MG5 647 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 PAXIP1Q6ZW49 1069 aaPredicted RBP11.39□□□□□ -0.59
PALB2-201ENST00000261584 ENGASEQ8NFI3 743 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 SEC31BQ9NQW1 1179 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 LCMT1Q9UIC8 334 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 MROH2AA6NES4 1674 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 TLDC2A0PJX2 215 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 PAFAH1B1P43034 410 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 PTGDRQ13258 359 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 FOXR1Q6PIV2 292 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 DZIP3Q86Y13 1208 aaKnown RBP11.39□□□□□ -0.59
PALB2-201ENST00000261584 AFAP1L1Q8TED9 768 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 DCAF5Q96JK2 942 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 ASAP1Q9ULH1 1129 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 A0A1W2PQ27 194 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 A0A1W2PQ64 194 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 A0A1W2PQD8 194 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 F8W031 263 aaPredicted RBP11.39□□□□□ -0.59
PALB2-201ENST00000261584 TADA3O75528 432 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 KRT2P35908 639 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 MCAMP43121 646 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 PPARAQ07869 468 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 C2orf54Q08AI8 447 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 KIF5AQ12840 1032 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 ILDR1Q86SU0 546 aaPredicted RBP11.39□□□□□ -0.59
PALB2-201ENST00000261584 KLHL7Q8IXQ5 586 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 IFNL3Q8IZI9 196 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 SMARCC2Q8TAQ2 1214 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 SAP30BPQ9UHR5 308 aaKnown RBP11.39□□□□□ -0.59
PALB2-201ENST00000261584 SRCAPQ6ZRS2 3230 aa11.39□□□□□ -0.59
PALB2-201ENST00000261584 GOLGA6L10A6NI86 522 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 SASH3O75995 380 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 IRX3P78415 501 aaPredicted RBP11.38□□□□□ -0.59
PALB2-201ENST00000261584 ZNF654Q8IZM8 581 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 MLKLQ8NB16 471 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 ESR2Q92731 530 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 AATFQ9NY61 560 aaKnown RBP eCLIP11.38□□□□□ -0.59
PALB2-201ENST00000261584 ALKQ9UM73 1620 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 INO80Q9ULG1 1556 aaPredicted RBP11.38□□□□□ -0.59
PALB2-201ENST00000261584 NEDD4P46934 1319 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 VSNL1P62760 191 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 SOGA3Q5TF21 947 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 ADAT2Q7Z6V5 191 aaKnown RBP11.38□□□□□ -0.59
PALB2-201ENST00000261584 SMCR8Q8TEV9 937 aaPredicted RBP11.38□□□□□ -0.59
PALB2-201ENST00000261584 KANSL2Q9H9L4 492 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 TMEM51Q9NW97 253 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 MAP2P11137 1827 aaKnown RBP11.38□□□□□ -0.59
PALB2-201ENST00000261584 GOLGA6CA6NDK9 693 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 PP2D1A8MPX8 630 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 BACH1O14867 736 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 NMT2O60551 498 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 GOLGA6DP0CG33 693 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 RILPL1Q5EBL4 403 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 CNGA4Q8IV77 575 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 AMOTL1Q8IY63 956 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 UHMK1Q8TAS1 419 aaKnown RBP11.38□□□□□ -0.59
PALB2-201ENST00000261584 GOLGA6AQ9NYA3 693 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 FRMD3A2A2Y4 597 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 SMIM22K7EJ46 135 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 EBAG9O00559 213 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 CYP27B1O15528 508 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 CDR1P51861 262 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 CCDC40Q4G0X9 1142 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 TTC38Q5R3I4 469 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 SRGAP1Q7Z6B7 1085 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 CSGALNACT2Q8N6G5 542 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 IQUBQ8NA54 791 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 CHP1Q99653 195 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 OSBPL5Q9H0X9 879 aaPredicted RBP11.38□□□□□ -0.59
PALB2-201ENST00000261584 C19orf44Q9H6X5 657 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 MCM9Q9NXL9 1143 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms