RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 AOC3Q16853 763 aa4.83□□□□□ -1.64
VPS13C-202ENST00000261517 OTUD7BQ6GQQ9 843 aa4.83□□□□□ -1.64
VPS13C-202ENST00000261517 CCDC102AQ96A19 550 aa4.83□□□□□ -1.64
VPS13C-202ENST00000261517 CCDC42Q96M95 316 aa4.83□□□□□ -1.64
VPS13C-202ENST00000261517 BCAP29Q9UHQ4 241 aa4.83□□□□□ -1.64
VPS13C-202ENST00000261517 MROH1Q8NDA8 1641 aa4.83□□□□□ -1.64
VPS13C-202ENST00000261517 PHACTR2O75167 634 aa4.83□□□□□ -1.64
VPS13C-202ENST00000261517 ITGA6P23229 1130 aa4.83□□□□□ -1.64
VPS13C-202ENST00000261517 CEBPAP49715 358 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-202ENST00000261517 TMC6Q7Z403 805 aa4.83□□□□□ -1.64
VPS13C-202ENST00000261517 HAUS1Q96CS2 278 aa4.83□□□□□ -1.64
VPS13C-202ENST00000261517 XDHP47989 1333 aa4.83□□□□□ -1.64
VPS13C-202ENST00000261517 ERCC6L2Q5T890 1561 aa4.83□□□□□ -1.64
VPS13C-202ENST00000261517 A0A1B0GUL7 405 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 GAP43P17677 238 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 SURF1Q15526 300 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 SLC27A3Q5K4L6 730 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 PPP1R18Q6NYC8 613 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 ELMSAN1Q6PJG2 1045 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 CCDC50Q8IVM0 306 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 TFCP2L1Q9NZI6 479 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 F8W8V4 182 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 XPOTO43592 962 aaKnown RBP4.82□□□□□ -1.64
VPS13C-202ENST00000261517 LGSNQ5TDP6 509 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 SEL1L2Q5TEA6 688 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 SPATA5Q8NB90 893 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.82□□□□□ -1.64
VPS13C-202ENST00000261517 ZMYM6O95789 1325 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 A0A1W2PQ27 194 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 A0A1W2PQ64 194 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 A0A1W2PQD8 194 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 ADCY7P51828 1080 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 ANO1Q5XXA6 986 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 CCDC129Q6ZRS4 1044 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 TECPR2O15040 1411 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 PHKG2P15735 406 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 ATF7P17544 494 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-202ENST00000261517 TYRO3Q06418 890 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 USHBP1Q8N6Y0 703 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 TMEM51Q9NW97 253 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 EVCP57679 992 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 CUL4BQ13620 913 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 HOXC6P09630 235 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 GPTP24298 496 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 NONOQ15233 471 aaKnown RBP eCLIP4.82□□□□□ -1.64
VPS13C-202ENST00000261517 GIMAP8Q8ND71 665 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-202ENST00000261517 MTMR7Q9Y216 660 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 AKR1B15C9JRZ8 316 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-202ENST00000261517 GNPATO15228 680 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 APBA1Q02410 837 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 SAMD1Q6SPF0 538 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-202ENST00000261517 BBOF1Q8ND07 529 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 BTG4Q9NY30 223 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 SSR1P43307 286 aaKnown RBP4.82□□□□□ -1.64
VPS13C-202ENST00000261517 CCNA1P78396 465 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 PPP4R3CPQ6ZMV5 832 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 GTF3C2Q8WUA4 911 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-202ENST00000261517 IQCGQ9H095 443 aaKnown RBP4.82□□□□□ -1.64
VPS13C-202ENST00000261517 TRIM35Q9UPQ4 493 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 GOLGA8CPA6NN73 597 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 SMARCA5O60264 1052 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-202ENST00000261517 SLU7O95391 586 aaKnown RBP4.82□□□□□ -1.64
VPS13C-202ENST00000261517 PDZD4Q76G19 769 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-202ENST00000261517 B4GALNT4Q76KP1 1039 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 KRT222Q8N1A0 295 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 ZNF830Q96NB3 372 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-202ENST00000261517 FAM184BQ9ULE4 1060 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 DNM3Q9UQ16 869 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 PFDN6O15212 129 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 CDC25BP30305 580 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 CLCN1P35523 988 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 RUFY4Q6ZNE9 571 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 PCDHB13Q9Y5F0 798 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 IVNS1ABPQ9Y6Y0 642 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 CDHR2Q9BYE9 1310 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 PTPDC1A2A3K4 754 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 IDEP14735 1019 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 AKNAD1Q5T1N1 836 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 KLHL10Q6JEL2 608 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 REXO1Q8N1G1 1221 aaKnown RBP4.82□□□□□ -1.64
VPS13C-202ENST00000261517 FOXP1Q9H334 677 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-202ENST00000261517 PFDN4Q9NQP4 134 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 RNF14Q9UBS8 474 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 PCDHB15Q9Y5E8 787 aa4.82□□□□□ -1.64
VPS13C-202ENST00000261517 M0QZ92 97 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 LONP1P36776 959 aaKnown RBP4.81□□□□□ -1.64
VPS13C-202ENST00000261517 ARHGEF25Q86VW2 580 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 CKAP2LQ8IYA6 745 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 CCHCR1Q8TD31 782 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 CTNNBL1Q8WYA6 563 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-202ENST00000261517 UBA5Q9GZZ9 404 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 CLSTN2Q9H4D0 955 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 ZNF277Q9NRM2 450 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-202ENST00000261517 SLC27A2O14975 620 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 TFCP2Q12800 502 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 PPFIA1Q13136 1202 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 DPP8Q6V1X1 898 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-202ENST00000261517 ARHGAP6O43182 974 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 UFL1O94874 794 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 LMNB2Q03252 620 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms