RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 AIFM3Q96NN9 605 aa20.54■□□□□ 0.88
SSB-201ENST00000260956 POLR3EQ9NVU0 708 aa20.54■□□□□ 0.88
SSB-201ENST00000260956 MYH2Q9UKX2 1941 aa20.54■□□□□ 0.88
SSB-201ENST00000260956 CEP350Q5VT06 3117 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 SMIM22K7EJ46 135 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 CPLX1O14810 134 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 AP5Z1O43299 807 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 CCDC192P0DO97 292 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 VEGFAP15692 232 aaPredicted RBP20.53■□□□□ 0.88
SSB-201ENST00000260956 RCAN1P53805 252 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 GTF2IP78347 998 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 TNIP1Q15025 636 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 MYSM1Q5VVJ2 828 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 MFSD6Q6ZSS7 791 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 TDRD7Q8NHU6 1098 aaKnown RBP20.53■□□□□ 0.88
SSB-201ENST00000260956 NSUN4Q96CB9 384 aaKnown RBP20.53■□□□□ 0.88
SSB-201ENST00000260956 USP17L3A6NCW0 530 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 USP17L4A6NCW7 530 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 YEATS4O95619 227 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 RXRAP19793 462 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 SEC23AQ15436 765 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 USP17L1Q7RTZ2 530 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 ZNF804AQ7Z570 1209 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 MICU3Q86XE3 530 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 LINC00301Q8NCQ3 95 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 BICD2Q8TD16 824 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 SDR42E1Q8WUS8 393 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 GMLQ99445 158 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 TNMDQ9H2S6 317 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 RAI14Q9P0K7 980 aa20.53■□□□□ 0.88
SSB-201ENST00000260956 ZNF646O15015 1829 aaPredicted RBP20.52■□□□□ 0.88
SSB-201ENST00000260956 GOLGA6L4A6NEF3 574 aa20.52■□□□□ 0.88
SSB-201ENST00000260956 GOLGA8AA7E2F4 631 aa20.52■□□□□ 0.88
SSB-201ENST00000260956 CDKL5O76039 1030 aa20.52■□□□□ 0.88
SSB-201ENST00000260956 EGFRP00533 1210 aa20.52■□□□□ 0.88
SSB-201ENST00000260956 DYNLL1P63167 89 aaKnown RBP20.52■□□□□ 0.88
SSB-201ENST00000260956 CERS5Q8N5B7 392 aa20.52■□□□□ 0.88
SSB-201ENST00000260956 TAF1DQ9H5J8 278 aaPredicted RBP20.52■□□□□ 0.88
SSB-201ENST00000260956 GPRC5DQ9NZD1 345 aa20.52■□□□□ 0.88
SSB-201ENST00000260956 ABCF2Q9UG63 623 aa20.52■□□□□ 0.88
SSB-201ENST00000260956 USP25Q9UHP3 1055 aa20.52■□□□□ 0.88
SSB-201ENST00000260956 A0A1W2PQ27 194 aa20.51■□□□□ 0.87
SSB-201ENST00000260956 A0A1W2PQ64 194 aa20.51■□□□□ 0.87
SSB-201ENST00000260956 A0A1W2PQD8 194 aa20.51■□□□□ 0.87
SSB-201ENST00000260956 IFIT3O14879 490 aaKnown RBP20.51■□□□□ 0.87
SSB-201ENST00000260956 CAMK4Q16566 473 aa20.51■□□□□ 0.87
SSB-201ENST00000260956 FAM200AQ8TCP9 573 aa20.51■□□□□ 0.87
SSB-201ENST00000260956 MYL10Q9BUA6 226 aa20.51■□□□□ 0.87
SSB-201ENST00000260956 IFNAR1P17181 557 aa20.5■□□□□ 0.87
SSB-201ENST00000260956 CEBPZQ03701 1054 aaKnown RBP20.5■□□□□ 0.87
SSB-201ENST00000260956 STRIP1Q5VSL9 837 aa20.5■□□□□ 0.87
SSB-201ENST00000260956 RSBN1LQ6PCB5 846 aaPredicted RBP20.5■□□□□ 0.87
SSB-201ENST00000260956 TMED8Q6PL24 325 aaPredicted RBP20.5■□□□□ 0.87
SSB-201ENST00000260956 ALG1Q9BT22 464 aa20.5■□□□□ 0.87
SSB-201ENST00000260956 RNF41Q9H4P4 317 aaPredicted RBP20.5■□□□□ 0.87
SSB-201ENST00000260956 PCDHA7Q9UN72 937 aa20.5■□□□□ 0.87
SSB-201ENST00000260956 CLIC4Q9Y696 253 aa20.5■□□□□ 0.87
SSB-201ENST00000260956 DDX60LQ5H9U9 1706 aaKnown RBP20.5■□□□□ 0.87
SSB-201ENST00000260956 FMNL1O95466 1100 aaPredicted RBP20.5■□□□□ 0.87
SSB-201ENST00000260956 KRT40Q6A162 431 aa20.5■□□□□ 0.87
SSB-201ENST00000260956 NBPF11Q86T75 865 aa20.5■□□□□ 0.87
SSB-201ENST00000260956 CCAR1Q8IX12 1150 aaKnown RBP20.5■□□□□ 0.87
SSB-201ENST00000260956 PHKBQ93100 1093 aa20.5■□□□□ 0.87
SSB-201ENST00000260956 FBXW7Q969H0 707 aa20.5■□□□□ 0.87
SSB-201ENST00000260956 ZKSCAN5Q9Y2L8 839 aa20.5■□□□□ 0.87
SSB-201ENST00000260956 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.5■□□□□ 0.87
SSB-201ENST00000260956 MECOMQ03112 1051 aa20.49■□□□□ 0.87
SSB-201ENST00000260956 FAM160A1Q05DH4 1040 aa20.49■□□□□ 0.87
SSB-201ENST00000260956 CKAP2LQ8IYA6 745 aa20.49■□□□□ 0.87
SSB-201ENST00000260956 CCDC39Q9UFE4 941 aa20.49■□□□□ 0.87
SSB-201ENST00000260956 CNOT7Q9UIV1 285 aaKnown RBP20.49■□□□□ 0.87
SSB-201ENST00000260956 HACL1Q9UJ83 578 aa20.49■□□□□ 0.87
SSB-201ENST00000260956 UBE2Q2LH0YL09 131 aa20.48■□□□□ 0.87
SSB-201ENST00000260956 U2AF2P26368 475 aaKnown RBP eCLIP20.48■□□□□ 0.872e-8■■□□□ 11.9
SSB-201ENST00000260956 EPHX2P34913 555 aa20.48■□□□□ 0.87
SSB-201ENST00000260956 GRIK5Q16478 980 aa20.48■□□□□ 0.87
SSB-201ENST00000260956 AXDND1Q5T1B0 1012 aaPredicted RBP20.48■□□□□ 0.87
SSB-201ENST00000260956 VPS37DQ86XT2 251 aa20.48■□□□□ 0.87
SSB-201ENST00000260956 MICALL2Q8IY33 904 aa20.48■□□□□ 0.87
SSB-201ENST00000260956 FMR1NBQ8N0W7 255 aaPredicted RBP20.48■□□□□ 0.87
SSB-201ENST00000260956 DPF2Q92785 391 aa20.48■□□□□ 0.87
SSB-201ENST00000260956 SLC12A7Q9Y666 1083 aa20.48■□□□□ 0.87
SSB-201ENST00000260956 MYH6P13533 1939 aa20.48■□□□□ 0.87
SSB-201ENST00000260956 CDK5RAP2Q96SN8 1893 aa20.48■□□□□ 0.87
SSB-201ENST00000260956 PSME4Q14997 1843 aa20.47■□□□□ 0.87
SSB-201ENST00000260956 ZNF500O60304 480 aaPredicted RBP20.47■□□□□ 0.87
SSB-201ENST00000260956 HIRAP54198 1017 aaPredicted RBP20.47■□□□□ 0.87
SSB-201ENST00000260956 ADALQ6DHV7 355 aa20.47■□□□□ 0.87
SSB-201ENST00000260956 FAM205AQ6ZU69 1335 aa20.47■□□□□ 0.87
SSB-201ENST00000260956 IQCA1LA6NCM1 817 aa20.47■□□□□ 0.87
SSB-201ENST00000260956 IGSF3O75054 1194 aa20.47■□□□□ 0.87
SSB-201ENST00000260956 ADCY5O95622 1261 aa20.47■□□□□ 0.87
SSB-201ENST00000260956 PRDX5P30044 214 aa20.47■□□□□ 0.87
SSB-201ENST00000260956 WTAPQ15007 396 aa20.47■□□□□ 0.87
SSB-201ENST00000260956 CTR9Q6PD62 1173 aa20.47■□□□□ 0.87
SSB-201ENST00000260956 CPLX2Q6PUV4 134 aaKnown RBP20.47■□□□□ 0.87
SSB-201ENST00000260956 NFXL1Q6ZNB6 911 aa20.47■□□□□ 0.87
SSB-201ENST00000260956 SAMD7Q7Z3H4 446 aa20.47■□□□□ 0.87
SSB-201ENST00000260956 CCDC144CPQ8IYA2 1237 aa20.47■□□□□ 0.87
SSB-201ENST00000260956 TRPM4Q8TD43 1214 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms