RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 MB21D2Q8IYB1 491 aaPredicted RBP18.4■□□□□ 0.54
GYPC-201ENST00000259254 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.4■□□□□ 0.54
GYPC-201ENST00000259254 PPP2R3BQ9Y5P8 575 aa18.4■□□□□ 0.54
GYPC-201ENST00000259254 TSPY2A6NKD2 308 aa18.39■□□□□ 0.53
GYPC-201ENST00000259254 FGRP09769 529 aa18.39■□□□□ 0.53
GYPC-201ENST00000259254 GABPAQ06546 454 aa18.39■□□□□ 0.53
GYPC-201ENST00000259254 FAM47AQ5JRC9 791 aa18.39■□□□□ 0.53
GYPC-201ENST00000259254 KRT26Q7Z3Y9 468 aa18.39■□□□□ 0.53
GYPC-201ENST00000259254 USP48Q86UV5 1035 aa18.39■□□□□ 0.53
GYPC-201ENST00000259254 HERC5Q9UII4 1024 aaKnown RBP18.39■□□□□ 0.53
GYPC-201ENST00000259254 DDX60LQ5H9U9 1706 aaKnown RBP18.39■□□□□ 0.53
GYPC-201ENST00000259254 ADM5C9JUS6 153 aa18.38■□□□□ 0.53
GYPC-201ENST00000259254 TSPY3P0CV98 308 aa18.38■□□□□ 0.53
GYPC-201ENST00000259254 TSPY8P0CW00 308 aa18.38■□□□□ 0.53
GYPC-201ENST00000259254 SLURP2P0DP57 97 aa18.38■□□□□ 0.53
GYPC-201ENST00000259254 RASA1P20936 1047 aa18.38■□□□□ 0.53
GYPC-201ENST00000259254 COL9A3Q14050 684 aaPredicted RBP18.38■□□□□ 0.53
GYPC-201ENST00000259254 PRAMEF18Q5VWM3 479 aa18.38■□□□□ 0.53
GYPC-201ENST00000259254 NOL8Q76FK4 1167 aaKnown RBP18.38■□□□□ 0.53
GYPC-201ENST00000259254 CYB5R4Q7L1T6 521 aa18.38■□□□□ 0.53
GYPC-201ENST00000259254 HOOK2Q96ED9 719 aa18.38■□□□□ 0.53
GYPC-201ENST00000259254 UBAC1Q9BSL1 405 aa18.38■□□□□ 0.53
GYPC-201ENST00000259254 LRRC2Q9BYS8 371 aa18.38■□□□□ 0.53
GYPC-201ENST00000259254 TAOK2Q9UL54 1235 aa18.38■□□□□ 0.53
GYPC-201ENST00000259254 WDR33Q9C0J8 1336 aaKnown RBP18.38■□□□□ 0.53
GYPC-201ENST00000259254 ERICH2A1L162 156 aa18.37■□□□□ 0.53
GYPC-201ENST00000259254 MPHOSPH10O00566 681 aaKnown RBP18.37■□□□□ 0.53
GYPC-201ENST00000259254 SHMT1P34896 483 aa18.37■□□□□ 0.53
GYPC-201ENST00000259254 NT5C2P49902 561 aa18.37■□□□□ 0.53
GYPC-201ENST00000259254 TFAP4Q01664 338 aa18.37■□□□□ 0.53
GYPC-201ENST00000259254 SART3Q15020 963 aaKnown RBP18.37■□□□□ 0.53
GYPC-201ENST00000259254 NBPF12Q5TAG4 269 aaPredicted RBP18.37■□□□□ 0.53
GYPC-201ENST00000259254 IFFO2Q5TF58 517 aa18.37■□□□□ 0.53
GYPC-201ENST00000259254 MIGA2Q7L4E1 593 aa18.37■□□□□ 0.53
GYPC-201ENST00000259254 SAPCD2Q86UD0 394 aa18.37■□□□□ 0.53
GYPC-201ENST00000259254 CAPNS2Q96L46 248 aa18.37■□□□□ 0.53
GYPC-201ENST00000259254 TEPSINQ96N21 525 aa18.37■□□□□ 0.53
GYPC-201ENST00000259254 ZKSCAN3Q9BRR0 538 aa18.37■□□□□ 0.53
GYPC-201ENST00000259254 DNAJC18Q9H819 358 aa18.37■□□□□ 0.53
GYPC-201ENST00000259254 ZNF408Q9H9D4 720 aa18.37■□□□□ 0.53
GYPC-201ENST00000259254 ZSWIM5Q9P217 1185 aa18.37■□□□□ 0.53
GYPC-201ENST00000259254 IFIT3O14879 490 aaKnown RBP18.36■□□□□ 0.53
GYPC-201ENST00000259254 LAMB1P07942 1786 aa18.36■□□□□ 0.53
GYPC-201ENST00000259254 ECE1P42892 770 aa18.36■□□□□ 0.53
GYPC-201ENST00000259254 AK2P54819 239 aa18.36■□□□□ 0.53
GYPC-201ENST00000259254 ANTXR2P58335 489 aa18.36■□□□□ 0.53
GYPC-201ENST00000259254 EXOSC10Q01780 885 aaKnown RBP18.36■□□□□ 0.53
GYPC-201ENST00000259254 LAMA4Q16363 1823 aa18.36■□□□□ 0.53
GYPC-201ENST00000259254 TMEM67Q5HYA8 995 aa18.36■□□□□ 0.53
GYPC-201ENST00000259254 ECM29Q5VYK3 1845 aa18.36■□□□□ 0.53
GYPC-201ENST00000259254 DCAF15Q66K64 600 aa18.36■□□□□ 0.53
GYPC-201ENST00000259254 Q6ZUG5 572 aa18.36■□□□□ 0.53
GYPC-201ENST00000259254 PAXIP1Q6ZW49 1069 aaPredicted RBP18.36■□□□□ 0.53
GYPC-201ENST00000259254 IQCA1Q86XH1 822 aa18.36■□□□□ 0.53
GYPC-201ENST00000259254 HSCBQ8IWL3 235 aa18.36■□□□□ 0.53
GYPC-201ENST00000259254 NKX2-3Q8TAU0 364 aa18.36■□□□□ 0.53
GYPC-201ENST00000259254 BAZ2AQ9UIF9 1905 aaKnown RBP18.36■□□□□ 0.53
GYPC-201ENST00000259254 FOCADQ5VW36 1801 aa18.35■□□□□ 0.53
GYPC-201ENST00000259254 WDR19Q8NEZ3 1342 aa18.35■□□□□ 0.53
GYPC-201ENST00000259254 ANKRD1Q15327 319 aa18.35■□□□□ 0.53
GYPC-201ENST00000259254 SUPT20HL1Q3ZLR7 823 aa18.35■□□□□ 0.53
GYPC-201ENST00000259254 CERKLQ49MI3 558 aaPredicted RBP18.35■□□□□ 0.53
GYPC-201ENST00000259254 COL13A1Q5TAT6 717 aaPredicted RBP18.35■□□□□ 0.53
GYPC-201ENST00000259254 CYP4F22Q6NT55 531 aa18.35■□□□□ 0.53
GYPC-201ENST00000259254 DLK2Q6UY11 383 aa18.35■□□□□ 0.53
GYPC-201ENST00000259254 METTL16Q86W50 562 aaKnown RBP18.35■□□□□ 0.53
GYPC-201ENST00000259254 IL27Q8NEV9 243 aa18.35■□□□□ 0.53
GYPC-201ENST00000259254 CCDC17Q96LX7 622 aa18.35■□□□□ 0.53
GYPC-201ENST00000259254 TTC14Q96N46 770 aa18.35■□□□□ 0.53
GYPC-201ENST00000259254 TBC1D12O60347 775 aa18.34■□□□□ 0.53
GYPC-201ENST00000259254 AKR1B1P15121 316 aa18.34■□□□□ 0.53
GYPC-201ENST00000259254 BRF1Q92994 677 aa18.34■□□□□ 0.53
GYPC-201ENST00000259254 HHIPL1Q96JK4 782 aa18.34■□□□□ 0.53
GYPC-201ENST00000259254 TMEM87BQ96K49 555 aa18.34■□□□□ 0.53
GYPC-201ENST00000259254 ZSCAN10Q96SZ4 725 aaPredicted RBP18.34■□□□□ 0.53
GYPC-201ENST00000259254 WBP1LQ9NX94 342 aa18.34■□□□□ 0.53
GYPC-201ENST00000259254 NAP1L2Q9ULW6 460 aaPredicted RBP18.34■□□□□ 0.53
GYPC-201ENST00000259254 CDK5RAP2Q96SN8 1893 aa18.34■□□□□ 0.53
GYPC-201ENST00000259254 TNKSO95271 1327 aa18.33■□□□□ 0.53
GYPC-201ENST00000259254 SH2B2O14492 632 aaPredicted RBP18.33■□□□□ 0.52
GYPC-201ENST00000259254 FOXN1O15353 648 aa18.33■□□□□ 0.52
GYPC-201ENST00000259254 GDF11O95390 407 aa18.33■□□□□ 0.52
GYPC-201ENST00000259254 NF2P35240 595 aa18.33■□□□□ 0.52
GYPC-201ENST00000259254 MCM2P49736 904 aa18.33■□□□□ 0.52
GYPC-201ENST00000259254 BECN1Q14457 450 aa18.33■□□□□ 0.52
GYPC-201ENST00000259254 WTAPQ15007 396 aa18.33■□□□□ 0.52
GYPC-201ENST00000259254 ABCB5Q2M3G0 1257 aa18.33■□□□□ 0.52
GYPC-201ENST00000259254 TATDN1Q6P1N9 297 aa18.33■□□□□ 0.52
GYPC-201ENST00000259254 NFXL1Q6ZNB6 911 aa18.33■□□□□ 0.52
GYPC-201ENST00000259254 NEDD1Q8NHV4 660 aa18.33■□□□□ 0.52
GYPC-201ENST00000259254 CDCA5Q96FF9 252 aa18.33■□□□□ 0.52
GYPC-201ENST00000259254 LARP6Q9BRS8 491 aaKnown RBP18.33■□□□□ 0.52
GYPC-201ENST00000259254 ZNF341Q9BYN7 854 aa18.33■□□□□ 0.52
GYPC-201ENST00000259254 CABP5Q9NP86 173 aa18.33■□□□□ 0.52
GYPC-201ENST00000259254 GPHNQ9NQX3 736 aaPredicted RBP18.33■□□□□ 0.52
GYPC-201ENST00000259254 MYH1P12882 1939 aa18.32■□□□□ 0.52
GYPC-201ENST00000259254 CD2BP2O95400 341 aaKnown RBP18.32■□□□□ 0.52
GYPC-201ENST00000259254 MAP2K1Q02750 393 aaPredicted RBP18.32■□□□□ 0.52
GYPC-201ENST00000259254 GRM1Q13255 1194 aa18.32■□□□□ 0.52
GYPC-201ENST00000259254 PRKG1Q13976 671 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms