RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 MATR3P43243 847 aaKnown RBP eCLIP5.38□□□□□ -1.55
USP44-201ENST00000258499 GYG1P46976 350 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 GYS2P54840 703 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 UBXN1Q04323 297 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 GRIN1Q05586 938 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 RASGRF1Q13972 1273 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 UBE3CQ15386 1083 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 TOGARAM2Q6ZUX3 1019 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 USP49Q70CQ1 688 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 CTAGE6Q86UF2 777 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 NLRP10Q86W26 655 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 METTL16Q86W50 562 aaKnown RBP5.38□□□□□ -1.55
USP44-201ENST00000258499 CTAGE4Q8IX94 777 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 LCORLQ8N3X6 602 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 OXER1Q8TDS5 423 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 GDAP1L1Q96MZ0 367 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 STRBPQ96SI9 672 aaKnown RBP5.38□□□□□ -1.55
USP44-201ENST00000258499 HINFPQ9BQA5 517 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 SLF1Q9BQI6 1058 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 TANGO6Q9C0B7 1094 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 CWC15Q9P013 229 aaKnown RBP5.38□□□□□ -1.55
USP44-201ENST00000258499 UBN2Q6ZU65 1347 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 TRIM21P19474 475 aaKnown RBP5.38□□□□□ -1.55
USP44-201ENST00000258499 USP5P45974 858 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 ATP2B2Q01814 1243 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 PDE4BQ07343 736 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 SMC1AQ14683 1233 aaKnown RBP5.38□□□□□ -1.55
USP44-201ENST00000258499 MTF1Q14872 753 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 FAM47AQ5JRC9 791 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 WDR24Q96S15 920 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 ATG3Q9NT62 314 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 MAP3K15Q6ZN16 1313 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 MON2Q7Z3U7 1717 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 KRT9P35527 623 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 CASP7P55210 303 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 PPARAQ07869 468 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 CCDC178Q5BJE1 867 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 DZIP1Q86YF9 867 aaKnown RBP5.38□□□□□ -1.55
USP44-201ENST00000258499 IQUBQ8NA54 791 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 CCDC148Q8NFR7 591 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 PIGBQ92521 554 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 SYMPKQ92797 1274 aaKnown RBP5.38□□□□□ -1.55
USP44-201ENST00000258499 CDK5RAP3Q96JB5 506 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 CTAGE1Q96RT6 745 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 CDC5LQ99459 802 aaKnown RBP5.38□□□□□ -1.55
USP44-201ENST00000258499 ZHX3Q9H4I2 956 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 JADE2Q9NQC1 790 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 RFX7Q2KHR2 1363 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 KDM6AO15550 1401 aaPredicted RBP5.37□□□□□ -1.55
USP44-201ENST00000258499 FAM205CA6NFA0 338 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 EFCAB8A8MWE9 144 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 MMP1P03956 469 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 IDEP14735 1019 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 CAPN2P17655 700 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 GNAT2P19087 354 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 CASP14P31944 242 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 MTIF2P46199 727 aaKnown RBP5.37□□□□□ -1.55
USP44-201ENST00000258499 FMR1Q06787 632 aaKnown RBP eCLIP5.37□□□□□ -1.55
USP44-201ENST00000258499 PDE4CQ08493 712 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 NOM1Q5C9Z4 860 aaKnown RBP5.37□□□□□ -1.55
USP44-201ENST00000258499 TTC38Q5R3I4 469 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 RESP18Q5W5W9 173 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 HEATR3Q7Z4Q2 680 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 NOC3LQ8WTT2 800 aaKnown RBP5.37□□□□□ -1.55
USP44-201ENST00000258499 RUFY1Q96T51 708 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 LY9Q9HBG7 655 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 MORC2Q9Y6X9 1032 aaPredicted RBP5.37□□□□□ -1.55
USP44-201ENST00000258499 USP17L12C9JPN9 530 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 USP17L21D6R901 530 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 TEX33O43247 280 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 STX10O60499 249 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 FMNL1O95466 1100 aaPredicted RBP5.37□□□□□ -1.55
USP44-201ENST00000258499 IFNAR1P17181 557 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 RBL2Q08999 1139 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 FKBP15Q5T1M5 1219 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 CNGA4Q8IV77 575 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 ANKRD18AQ8IVF6 992 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 CRACR2AQ9BSW2 395 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 ISCA1Q9BUE6 129 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 KAT14Q9H8E8 782 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 AATFQ9NY61 560 aaKnown RBP eCLIP5.37□□□□□ -1.55
USP44-201ENST00000258499 PTGDRQ13258 359 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 NCAPHQ15003 741 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 CCDC181Q5TID7 509 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 HOMEZQ8IX15 550 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 CEP112Q8N8E3 955 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 ACRBPQ8NEB7 543 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 PARD6BQ9BYG5 372 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 AGXT2Q9BYV1 514 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 MCM9Q9NXL9 1143 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 TFCP2L1Q9NZI6 479 aa5.37□□□□□ -1.55
USP44-201ENST00000258499 WDR17Q8IZU2 1322 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 NRXN3Q9Y4C0 1643 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 ZBTB22O15209 634 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 PLCD1P51178 756 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 DYNLL1P63167 89 aaKnown RBP5.36□□□□□ -1.55
USP44-201ENST00000258499 SOGA3Q5TF21 947 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 SAMD1Q6SPF0 538 aaPredicted RBP5.36□□□□□ -1.55
USP44-201ENST00000258499 CRACR2BQ8N4Y2 399 aaPredicted RBP5.36□□□□□ -1.55
USP44-201ENST00000258499 GPR161Q8N6U8 529 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms