RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 RBM26Q5T8P6 1007 aaKnown RBP5.33□□□□□ -1.56
RC3H1-201ENST00000258349 AKAP12Q02952 1782 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 MAP2K2P36507 400 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 PPP2R5BQ15173 497 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 MAIP1Q8WWC4 291 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 FAM204AQ9H8W3 233 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 THEGQ9P2T0 379 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 PRDM15P57071 1507 aaPredicted RBP5.33□□□□□ -1.56
RC3H1-201ENST00000258349 A0A1B0GVL5 298 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 PPFIA3O75145 1194 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 PPFIA4O75335 1185 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 SDCCAG8Q86SQ7 713 aaPredicted RBP5.33□□□□□ -1.56
RC3H1-201ENST00000258349 NELFBQ8WX92 580 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 CEP170Q5SW79 1584 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 ADGRL2O95490 1459 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 KDM3AQ9Y4C1 1321 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 HHATQ5VTY9 493 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 RNF168Q8IYW5 571 aaPredicted RBP5.33□□□□□ -1.56
RC3H1-201ENST00000258349 CBX8Q9HC52 389 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 GIPC1O14908 333 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 SLC27A2O14975 620 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 PLS1Q14651 629 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 MUM1Q2TAK8 710 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 SH2D4AQ9H788 454 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 PFDN4Q9NQP4 134 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 AMOTL2Q9Y2J4 779 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 PLCH2O75038 1416 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 TLDC2A0PJX2 215 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 TRIM37O94972 964 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 CALCRLQ16602 461 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 CCDC84Q86UT8 332 aaPredicted RBP5.33□□□□□ -1.56
RC3H1-201ENST00000258349 RUNDC3BQ96NL0 473 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 LDHBP07195 334 aaKnown RBP5.33□□□□□ -1.56
RC3H1-201ENST00000258349 TNFAIP3P21580 790 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 STX17P56962 302 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 TBC1D8BQ0IIM8 1120 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 CCDC117Q8IWD4 279 aaPredicted RBP5.33□□□□□ -1.56
RC3H1-201ENST00000258349 GOLGA5Q8TBA6 731 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 BABAM1Q9NWV8 329 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 WWC3Q9ULE0 1092 aa5.33□□□□□ -1.56
RC3H1-201ENST00000258349 BCORL1Q5H9F3 1711 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 ACEP12821 1306 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 PUM3Q15397 648 aaKnown RBP5.32□□□□□ -1.56
RC3H1-201ENST00000258349 FAM71BQ8TC56 605 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 LEO1Q8WVC0 666 aaPredicted RBP5.32□□□□□ -1.56
RC3H1-201ENST00000258349 RBSNQ9H1K0 784 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 SATB1Q01826 763 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 PEX26Q7Z412 305 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 TRIM58Q8NG06 486 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 PCDH11XQ9BZA7 1347 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 PCDH11YQ9BZA8 1340 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 FAN1Q9Y2M0 1017 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 RGS16O15492 202 aaPredicted RBP5.32□□□□□ -1.56
RC3H1-201ENST00000258349 DPH6Q7L8W6 267 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 OGFOD1Q8N543 542 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 CSGALNACT2Q8N6G5 542 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 MYCBPQ99417 103 aaPredicted RBP5.32□□□□□ -1.56
RC3H1-201ENST00000258349 MCM9Q9NXL9 1143 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 A0A1W2PP64 1363 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 MYOM2P54296 1465 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 GOLGA8QA0A0J9YX86 632 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 GOLGA8OA6NCC3 632 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 GOLGA8NF8WBI6 632 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 PPFIA2O75334 1257 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 TFCP2Q12800 502 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 GRK7Q8WTQ7 553 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 TACC3Q9Y6A5 838 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 MAP3K4Q9Y6R4 1608 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 TBC1D8O95759 1140 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 YWHAEP62258 255 aaKnown RBP5.32□□□□□ -1.56
RC3H1-201ENST00000258349 LINS1Q8NG48 757 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 CACYBPQ9HB71 228 aaKnown RBP5.32□□□□□ -1.56
RC3H1-201ENST00000258349 SAR1BQ9Y6B6 198 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 SNCBQ16143 134 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 CCDC125Q86Z20 511 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 TTC36A6NLP5 189 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 EVI5O60447 810 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 RPS6KA1Q15418 735 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 FNBP1Q96RU3 617 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 HAUS8Q9BT25 410 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 ASIC3Q9UHC3 531 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 PZPP20742 1482 aa5.32□□□□□ -1.56
RC3H1-201ENST00000258349 U2AF2P26368 475 aaKnown RBP eCLIP5.31□□□□□ -1.562e-9■■□□□ 13.4
RC3H1-201ENST00000258349 ATP6V1AP38606 617 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 ZSCAN26Q16670 478 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 TYW1Q9NV66 732 aaKnown RBP5.31□□□□□ -1.56
RC3H1-201ENST00000258349 EFCAB8A8MWE9 144 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 P4HA1P13674 534 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 FAM212AQ96EL1 285 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 KRT12Q99456 494 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 LARSQ9P2J5 1176 aaKnown RBP5.31□□□□□ -1.56
RC3H1-201ENST00000258349 STRN3Q13033 797 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 MYO9BQ13459 2157 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 PHLDB3Q6NSJ2 640 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 TCEANC2Q96MN5 208 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 TRIM4Q9C037 500 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 MRPL44Q9H9J2 332 aaKnown RBP5.31□□□□□ -1.56
RC3H1-201ENST00000258349 ARHGEF10LQ9HCE6 1279 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 MYCNP04198 464 aaPredicted RBP5.31□□□□□ -1.56
RC3H1-201ENST00000258349 TTC38Q5R3I4 469 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms