RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 ERLIN2O94905 339 aa13.03□□□□□ -0.32
TROAP-201ENST00000257909 PWP2Q15269 919 aaKnown RBP13.03□□□□□ -0.32
TROAP-201ENST00000257909 CYP26C1Q6V0L0 522 aa13.03□□□□□ -0.32
TROAP-201ENST00000257909 NOSTRINQ8IVI9 506 aa13.03□□□□□ -0.32
TROAP-201ENST00000257909 STK11IPQ8N1F8 1099 aa13.03□□□□□ -0.32
TROAP-201ENST00000257909 RPGRIP1Q96KN7 1286 aa13.03□□□□□ -0.32
TROAP-201ENST00000257909 CDHR2Q9BYE9 1310 aa13.03□□□□□ -0.32
TROAP-201ENST00000257909 ANKRD65E5RJM6 399 aa13.02□□□□□ -0.32
TROAP-201ENST00000257909 GYPCP04921 128 aa13.02□□□□□ -0.32
TROAP-201ENST00000257909 USP8P40818 1118 aa13.02□□□□□ -0.32
TROAP-201ENST00000257909 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.32
TROAP-201ENST00000257909 STIM1Q13586 685 aa13.02□□□□□ -0.32
TROAP-201ENST00000257909 SPECC1Q5M775 1068 aa13.02□□□□□ -0.32
TROAP-201ENST00000257909 CDKAL1Q5VV42 579 aa13.02□□□□□ -0.32
TROAP-201ENST00000257909 ACRBPQ8NEB7 543 aa13.02□□□□□ -0.32
TROAP-201ENST00000257909 COG1Q8WTW3 980 aa13.02□□□□□ -0.32
TROAP-201ENST00000257909 APPBP2Q92624 585 aa13.02□□□□□ -0.32
TROAP-201ENST00000257909 PLEKHA4Q9H4M7 779 aa13.02□□□□□ -0.32
TROAP-201ENST00000257909 FBXO2Q9UK22 296 aaPredicted RBP13.02□□□□□ -0.32
TROAP-201ENST00000257909 SYNRGQ9UMZ2 1314 aa13.02□□□□□ -0.32
TROAP-201ENST00000257909 ECM29Q5VYK3 1845 aa13.02□□□□□ -0.33
TROAP-201ENST00000257909 MYH8P13535 1937 aa13.02□□□□□ -0.33
TROAP-201ENST00000257909 ARHGAP25P42331 645 aa13.02□□□□□ -0.33
TROAP-201ENST00000257909 TRIM14Q14142 442 aa13.02□□□□□ -0.33
TROAP-201ENST00000257909 APOA5Q6Q788 366 aa13.02□□□□□ -0.33
TROAP-201ENST00000257909 LRP10Q7Z4F1 713 aa13.02□□□□□ -0.33
TROAP-201ENST00000257909 WASF1Q92558 559 aa13.02□□□□□ -0.33
TROAP-201ENST00000257909 PHKBQ93100 1093 aa13.02□□□□□ -0.33
TROAP-201ENST00000257909 STK36Q9NRP7 1315 aa13.02□□□□□ -0.33
TROAP-201ENST00000257909 ARFGEF2Q9Y6D5 1785 aa13.01□□□□□ -0.33
TROAP-201ENST00000257909 EBAG9O00559 213 aa13.01□□□□□ -0.33
TROAP-201ENST00000257909 SH2B2O14492 632 aaPredicted RBP13.01□□□□□ -0.33
TROAP-201ENST00000257909 ACTN4O43707 911 aaKnown RBP13.01□□□□□ -0.33
TROAP-201ENST00000257909 TFRCP02786 760 aaKnown RBP13.01□□□□□ -0.33
TROAP-201ENST00000257909 FOXO4P98177 505 aa13.01□□□□□ -0.33
TROAP-201ENST00000257909 FKBP4Q02790 459 aaKnown RBP eCLIP13.01□□□□□ -0.33
TROAP-201ENST00000257909 SAFBQ15424 915 aaKnown RBP eCLIP13.01□□□□□ -0.33
TROAP-201ENST00000257909 RILPL1Q5EBL4 403 aa13.01□□□□□ -0.33
TROAP-201ENST00000257909 NCAPH2Q6IBW4 605 aa13.01□□□□□ -0.33
TROAP-201ENST00000257909 TRAPPC11Q7Z392 1133 aa13.01□□□□□ -0.33
TROAP-201ENST00000257909 FAM76AQ8TAV0 307 aa13.01□□□□□ -0.33
TROAP-201ENST00000257909 CRACR2AQ9BSW2 395 aa13.01□□□□□ -0.33
TROAP-201ENST00000257909 EYA2O00167 538 aa13.01□□□□□ -0.33
TROAP-201ENST00000257909 MMP14P50281 582 aa13.01□□□□□ -0.33
TROAP-201ENST00000257909 FXR1P51114 621 aaKnown RBP eCLIP13.01□□□□□ -0.33
TROAP-201ENST00000257909 NBPF14Q5TI25 921 aa13.01□□□□□ -0.33
TROAP-201ENST00000257909 SAMD1Q6SPF0 538 aaPredicted RBP13.01□□□□□ -0.33
TROAP-201ENST00000257909 TMEM87BQ96K49 555 aa13.01□□□□□ -0.33
TROAP-201ENST00000257909 ABHD10Q9NUJ1 306 aa13.01□□□□□ -0.33
TROAP-201ENST00000257909 CEP131Q9UPN4 1083 aa13.01□□□□□ -0.33
TROAP-201ENST00000257909 ZC3H4Q9UPT8 1303 aaKnown RBP13□□□□□ -0.33
TROAP-201ENST00000257909 ATP5J2-PTCD1G3V325 749 aa13□□□□□ -0.33
TROAP-201ENST00000257909 EXOC5O00471 708 aa13□□□□□ -0.33
TROAP-201ENST00000257909 ZBTB43O43298 467 aa13□□□□□ -0.33
TROAP-201ENST00000257909 PTCD1O75127 700 aaKnown RBP13□□□□□ -0.33
TROAP-201ENST00000257909 GSCP56915 257 aaPredicted RBP13□□□□□ -0.33
TROAP-201ENST00000257909 ERVK-24P63145 666 aa13□□□□□ -0.33
TROAP-201ENST00000257909 CUL4BQ13620 913 aa13□□□□□ -0.33
TROAP-201ENST00000257909 SART3Q15020 963 aaKnown RBP13□□□□□ -0.33
TROAP-201ENST00000257909 NTRK3Q16288 839 aa13□□□□□ -0.33
TROAP-201ENST00000257909 POTEDQ86YR6 584 aa13□□□□□ -0.33
TROAP-201ENST00000257909 BCCIPQ9P287 314 aaKnown RBP eCLIP13□□□□□ -0.33
TROAP-201ENST00000257909 SRPRBQ9Y5M8 271 aaKnown RBP13□□□□□ -0.33
TROAP-201ENST00000257909 UBN2Q6ZU65 1347 aa13□□□□□ -0.33
TROAP-201ENST00000257909 PSMD14O00487 310 aa13□□□□□ -0.33
TROAP-201ENST00000257909 CIAO1O76071 339 aa13□□□□□ -0.33
TROAP-201ENST00000257909 CKAP4Q07065 602 aaKnown RBP13□□□□□ -0.33
TROAP-201ENST00000257909 SLC39A6Q13433 755 aa13□□□□□ -0.33
TROAP-201ENST00000257909 H7C1W4 665 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 ABL1P00519 1130 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 TOB1P50616 345 aaPredicted RBP12.99□□□□□ -0.33
TROAP-201ENST00000257909 SSRP1Q08945 709 aaKnown RBP12.99□□□□□ -0.33
TROAP-201ENST00000257909 GBP6Q6ZN66 633 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 MICU3Q86XE3 530 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 GRAMD1CQ8IYS0 662 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 HAUS4Q9H6D7 363 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 SLC52A2Q9HAB3 445 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 GOLGA6CA6NDK9 693 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 GOLGA8AA7E2F4 631 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 GPAA1O43292 621 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 MMP1P03956 469 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 SNRPA1P09661 255 aaKnown RBP12.99□□□□□ -0.33
TROAP-201ENST00000257909 GOLGA6DP0CG33 693 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 GGCXP38435 758 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 GRIN1Q05586 938 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 PPFIA1Q13136 1202 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 KLHL10Q6JEL2 608 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 THEMISQ8N1K5 641 aaPredicted RBP12.99□□□□□ -0.33
TROAP-201ENST00000257909 PLBD2Q8NHP8 589 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 FOXP1Q9H334 677 aaPredicted RBP12.99□□□□□ -0.33
TROAP-201ENST00000257909 GOLGA6AQ9NYA3 693 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 SAR1BQ9Y6B6 198 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 FAM169AQ9Y6X4 670 aa12.99□□□□□ -0.33
TROAP-201ENST00000257909 SHTN1A0MZ66 631 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 RANBP6O60518 1105 aaKnown RBP12.98□□□□□ -0.33
TROAP-201ENST00000257909 RXRAP19793 462 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 CCT5P48643 541 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 IRAK1P51617 712 aa12.98□□□□□ -0.33
TROAP-201ENST00000257909 SF3B2Q13435 895 aaKnown RBP12.98□□□□□ -0.33
TROAP-201ENST00000257909 E2F4Q16254 413 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms