RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 NAV1Q8NEY1 1877 aa10.27□□□□□ -0.76
TMEM258-201ENST00000257262 CA12O43570 354 aa10.27□□□□□ -0.77
TMEM258-201ENST00000257262 PRKAB2O43741 272 aa10.27□□□□□ -0.77
TMEM258-201ENST00000257262 CTNND1O60716 968 aaKnown RBP10.27□□□□□ -0.77
TMEM258-201ENST00000257262 ECM2O94769 699 aaPredicted RBP10.27□□□□□ -0.77
TMEM258-201ENST00000257262 HLA-DOAP06340 250 aa10.27□□□□□ -0.77
TMEM258-201ENST00000257262 PPATQ06203 517 aa10.27□□□□□ -0.77
TMEM258-201ENST00000257262 RRP1BQ14684 758 aaKnown RBP10.27□□□□□ -0.77
TMEM258-201ENST00000257262 NOL9Q5SY16 702 aaKnown RBP10.27□□□□□ -0.77
TMEM258-201ENST00000257262 PLEKHM2Q8IWE5 1019 aa10.27□□□□□ -0.77
TMEM258-201ENST00000257262 SCYL3Q8IZE3 742 aa10.27□□□□□ -0.77
TMEM258-201ENST00000257262 MS4A4AQ96JQ5 239 aa10.27□□□□□ -0.77
TMEM258-201ENST00000257262 FSD1Q9BTV5 496 aa10.27□□□□□ -0.77
TMEM258-201ENST00000257262 HERC5Q9UII4 1024 aaKnown RBP10.27□□□□□ -0.77
TMEM258-201ENST00000257262 DDX60LQ5H9U9 1706 aaKnown RBP10.27□□□□□ -0.77
TMEM258-201ENST00000257262 PHIPQ8WWQ0 1821 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 TESPA1A2RU30 521 aaPredicted RBP10.26□□□□□ -0.77
TMEM258-201ENST00000257262 IRF6O14896 467 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 TBC1D8O95759 1140 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 ZFYP08048 801 aaPredicted RBP10.26□□□□□ -0.77
TMEM258-201ENST00000257262 PLCD1P51178 756 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 GTF2A2P52657 109 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 PPIL2Q13356 520 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 TTC6Q86TZ1 520 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 METTL16Q86W50 562 aaKnown RBP10.26□□□□□ -0.77
TMEM258-201ENST00000257262 CRACR2BQ8N4Y2 399 aaPredicted RBP10.26□□□□□ -0.77
TMEM258-201ENST00000257262 APPBP2Q92624 585 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 OSBP2Q969R2 916 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 EVI5LQ96CN4 794 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 STRBPQ96SI9 672 aaKnown RBP10.26□□□□□ -0.77
TMEM258-201ENST00000257262 PTPN18Q99952 460 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 TRIM34Q9BYJ4 488 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 OSBPL3Q9H4L5 887 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 DNAJC18Q9H819 358 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 DCP1AQ9NPI6 582 aaPredicted RBP10.26□□□□□ -0.77
TMEM258-201ENST00000257262 MCM9Q9NXL9 1143 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 SAGE1Q9NXZ1 904 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.26□□□□□ -0.77
TMEM258-201ENST00000257262 SLC4A4Q9Y6R1 1079 aa10.26□□□□□ -0.77
TMEM258-201ENST00000257262 BAZ2AQ9UIF9 1905 aaKnown RBP10.25□□□□□ -0.77
TMEM258-201ENST00000257262 CCL15-CCL14A0A0B4J2E2 113 aa10.25□□□□□ -0.77
TMEM258-201ENST00000257262 IGF2BP3O00425 579 aaKnown RBP eCLIP10.25□□□□□ -0.77
TMEM258-201ENST00000257262 POLR3DP05423 398 aaPredicted RBP10.25□□□□□ -0.77
TMEM258-201ENST00000257262 PTPRAP18433 802 aa10.25□□□□□ -0.77
TMEM258-201ENST00000257262 PDE4AP27815 886 aa10.25□□□□□ -0.77
TMEM258-201ENST00000257262 CAP2P40123 477 aa10.25□□□□□ -0.77
TMEM258-201ENST00000257262 CCL15Q16663 113 aa10.25□□□□□ -0.77
TMEM258-201ENST00000257262 LRRFIP1Q32MZ4 808 aaKnown RBP10.25□□□□□ -0.77
TMEM258-201ENST00000257262 CCDC84Q86UT8 332 aaPredicted RBP10.25□□□□□ -0.77
TMEM258-201ENST00000257262 RILPL2Q969X0 211 aa10.25□□□□□ -0.77
TMEM258-201ENST00000257262 SEC62Q99442 399 aaKnown RBP10.25□□□□□ -0.77
TMEM258-201ENST00000257262 PICK1Q9NRD5 415 aa10.25□□□□□ -0.77
TMEM258-201ENST00000257262 ATP8A2Q9NTI2 1148 aa10.25□□□□□ -0.77
TMEM258-201ENST00000257262 ZHX2Q9Y6X8 837 aa10.25□□□□□ -0.77
TMEM258-201ENST00000257262 TRIM6-TRIM34B2RNG4 842 aa10.24□□□□□ -0.77
TMEM258-201ENST00000257262 M0R2C6 588 aa10.24□□□□□ -0.77
TMEM258-201ENST00000257262 ALDH1A1P00352 501 aa10.24□□□□□ -0.77
TMEM258-201ENST00000257262 CYP2D6P10635 497 aa10.24□□□□□ -0.77
TMEM258-201ENST00000257262 CETPP11597 493 aa10.24□□□□□ -0.77
TMEM258-201ENST00000257262 JAG1P78504 1218 aa10.24□□□□□ -0.77
TMEM258-201ENST00000257262 SNAPC2Q13487 334 aa10.24□□□□□ -0.77
TMEM258-201ENST00000257262 OTUD7BQ6GQQ9 843 aa10.24□□□□□ -0.77
TMEM258-201ENST00000257262 TATDN1Q6P1N9 297 aa10.24□□□□□ -0.77
TMEM258-201ENST00000257262 PDCD7Q8N8D1 485 aaKnown RBP10.24□□□□□ -0.77
TMEM258-201ENST00000257262 BRI3BPQ8WY22 251 aa10.24□□□□□ -0.77
TMEM258-201ENST00000257262 EHD4Q9H223 541 aa10.24□□□□□ -0.77
TMEM258-201ENST00000257262 PRDM10Q9NQV6 1147 aa10.24□□□□□ -0.77
TMEM258-201ENST00000257262 SERPINB13Q9UIV8 391 aa10.24□□□□□ -0.77
TMEM258-201ENST00000257262 KCNH4Q9UQ05 1017 aa10.24□□□□□ -0.77
TMEM258-201ENST00000257262 AFG3L2Q9Y4W6 797 aa10.24□□□□□ -0.77
TMEM258-201ENST00000257262 GSG1L2A8MUP6 293 aa10.23□□□□□ -0.77
TMEM258-201ENST00000257262 USP17L12C9JPN9 530 aa10.23□□□□□ -0.77
TMEM258-201ENST00000257262 USP17L21D6R901 530 aa10.23□□□□□ -0.77
TMEM258-201ENST00000257262 CXCL11O14625 94 aa10.23□□□□□ -0.77
TMEM258-201ENST00000257262 GPAA1O43292 621 aa10.23□□□□□ -0.77
TMEM258-201ENST00000257262 GDF11O95390 407 aa10.23□□□□□ -0.77
TMEM258-201ENST00000257262 SHROOM1Q2M3G4 852 aaPredicted RBP10.23□□□□□ -0.77
TMEM258-201ENST00000257262 ZMYM1Q5SVZ6 1142 aa10.23□□□□□ -0.77
TMEM258-201ENST00000257262 CTR9Q6PD62 1173 aa10.23□□□□□ -0.77
TMEM258-201ENST00000257262 R3HDMLQ9H3Y0 253 aa10.23□□□□□ -0.77
TMEM258-201ENST00000257262 CYP2D7A0A087X1C5 515 aa10.22□□□□□ -0.77
TMEM258-201ENST00000257262 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.22□□□□□ -0.77
TMEM258-201ENST00000257262 USP17L5A8MUK1 530 aa10.22□□□□□ -0.77
TMEM258-201ENST00000257262 PATL2C9JE40 543 aaKnown RBP10.22□□□□□ -0.77
TMEM258-201ENST00000257262 BTBD19C9JJ37 291 aa10.22□□□□□ -0.77
TMEM258-201ENST00000257262 SMIM22K7EJ46 135 aa10.22□□□□□ -0.77
TMEM258-201ENST00000257262 APPP05067 770 aa10.22□□□□□ -0.77
TMEM258-201ENST00000257262 GNAT2P19087 354 aa10.22□□□□□ -0.77
TMEM258-201ENST00000257262 SHMT1P34896 483 aa10.22□□□□□ -0.77
TMEM258-201ENST00000257262 GABPAQ06546 454 aa10.22□□□□□ -0.77
TMEM258-201ENST00000257262 MOGSQ13724 837 aa10.22□□□□□ -0.77
TMEM258-201ENST00000257262 CERKLQ49MI3 558 aaPredicted RBP10.22□□□□□ -0.77
TMEM258-201ENST00000257262 C12orf60Q5U649 245 aa10.22□□□□□ -0.77
TMEM258-201ENST00000257262 FAM43AQ8N2R8 423 aa10.22□□□□□ -0.77
TMEM258-201ENST00000257262 DYNLL2Q96FJ2 89 aa10.22□□□□□ -0.77
TMEM258-201ENST00000257262 DDRGK1Q96HY6 314 aa10.22□□□□□ -0.77
TMEM258-201ENST00000257262 ZFP91Q96JP5 570 aaPredicted RBP10.22□□□□□ -0.77
TMEM258-201ENST00000257262 CFHR5Q9BXR6 569 aa10.22□□□□□ -0.77
TMEM258-201ENST00000257262 PTPRFP10586 1907 aa10.21□□□□□ -0.77
TMEM258-201ENST00000257262 MYH8P13535 1937 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms