RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 HLFQ16534 295 aa13.61□□□□□ -0.23
USHBP1-201ENST00000252597 DACH1Q9UI36 760 aa13.61□□□□□ -0.23
USHBP1-201ENST00000252597 ASAP1Q9ULH1 1129 aa13.61□□□□□ -0.23
USHBP1-201ENST00000252597 PHLPP2Q6ZVD8 1323 aa13.61□□□□□ -0.23
USHBP1-201ENST00000252597 IRS4O14654 1257 aaPredicted RBP13.61□□□□□ -0.23
USHBP1-201ENST00000252597 MCM7P33993 719 aa13.61□□□□□ -0.23
USHBP1-201ENST00000252597 SRRTQ9BXP5 876 aaKnown RBP13.61□□□□□ -0.23
USHBP1-201ENST00000252597 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.61□□□□□ -0.23
USHBP1-201ENST00000252597 TRIM10Q9UDY6 481 aa13.61□□□□□ -0.23
USHBP1-201ENST00000252597 FAN1Q9Y2M0 1017 aa13.61□□□□□ -0.23
USHBP1-201ENST00000252597 CASP7P55210 303 aa13.6□□□□□ -0.23
USHBP1-201ENST00000252597 CCDC93Q567U6 631 aa13.6□□□□□ -0.23
USHBP1-201ENST00000252597 RAD9BQ6WBX8 426 aa13.6□□□□□ -0.23
USHBP1-201ENST00000252597 DHX37Q8IY37 1157 aaKnown RBP13.6□□□□□ -0.23
USHBP1-201ENST00000252597 TMOD3Q9NYL9 352 aa13.6□□□□□ -0.23
USHBP1-201ENST00000252597 ADAM21Q9UKJ8 722 aa13.6□□□□□ -0.23
USHBP1-201ENST00000252597 UBAP1LF5GYI3 381 aa13.6□□□□□ -0.23
USHBP1-201ENST00000252597 IBSPP21815 317 aaPredicted RBP13.6□□□□□ -0.23
USHBP1-201ENST00000252597 TSR1Q2NL82 804 aaKnown RBP13.6□□□□□ -0.23
USHBP1-201ENST00000252597 NOM1Q5C9Z4 860 aaKnown RBP13.6□□□□□ -0.23
USHBP1-201ENST00000252597 RESP18Q5W5W9 173 aa13.6□□□□□ -0.23
USHBP1-201ENST00000252597 GSPT2Q8IYD1 628 aaKnown RBP13.6□□□□□ -0.23
USHBP1-201ENST00000252597 NUTM2BA6NNL0 878 aaPredicted RBP13.59□□□□□ -0.23
USHBP1-201ENST00000252597 NUTM2EB1AL46 878 aaPredicted RBP13.59□□□□□ -0.23
USHBP1-201ENST00000252597 SRGAP2O75044 1071 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 MAP3K12Q12852 859 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 IFNL3Q8IZI9 196 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 GPR161Q8N6U8 529 aaKnown RBP13.59□□□□□ -0.23
USHBP1-201ENST00000252597 AGXT2Q9BYV1 514 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 ABCB6Q9NP58 842 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 ALS2Q96Q42 1657 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 SYNRGQ9UMZ2 1314 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 CTAGE9A4FU28 777 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 H3BQF6 201 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 PTPAQ15257 358 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 ENOX2Q16206 610 aaKnown RBP13.59□□□□□ -0.23
USHBP1-201ENST00000252597 TXLNBQ8N3L3 684 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 POLD4Q9HCU8 107 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 LCMT1Q9UIC8 334 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 TRIM75PA6NK02 468 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 BCAMP50895 628 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 NACAP1Q9BZK3 213 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 HDAC6Q9UBN7 1215 aa13.59□□□□□ -0.23
USHBP1-201ENST00000252597 CTAGE15A4D2H0 777 aa13.58□□□□□ -0.24
USHBP1-201ENST00000252597 CTAGE8P0CG41 777 aa13.58□□□□□ -0.24
USHBP1-201ENST00000252597 ADD2P35612 726 aa13.58□□□□□ -0.24
USHBP1-201ENST00000252597 NAP1L1P55209 391 aaKnown RBP13.58□□□□□ -0.24
USHBP1-201ENST00000252597 TTC19Q6DKK2 380 aaPredicted RBP13.58□□□□□ -0.24
USHBP1-201ENST00000252597 BICDL1Q6ZP65 573 aa13.58□□□□□ -0.24
USHBP1-201ENST00000252597 CTAGE6Q86UF2 777 aa13.58□□□□□ -0.24
USHBP1-201ENST00000252597 CTAGE4Q8IX94 777 aa13.58□□□□□ -0.24
USHBP1-201ENST00000252597 TEX13AQ9BXU3 409 aaPredicted RBP13.58□□□□□ -0.24
USHBP1-201ENST00000252597 MEGF6O75095 1541 aa13.58□□□□□ -0.24
USHBP1-201ENST00000252597 STX10O60499 249 aa13.58□□□□□ -0.24
USHBP1-201ENST00000252597 KRT9P35527 623 aa13.58□□□□□ -0.24
USHBP1-201ENST00000252597 TCIRG1Q13488 830 aa13.58□□□□□ -0.24
USHBP1-201ENST00000252597 KIAA1328Q86T90 577 aa13.58□□□□□ -0.24
USHBP1-201ENST00000252597 SYMPKQ92797 1274 aaKnown RBP13.58□□□□□ -0.24
USHBP1-201ENST00000252597 UIMC1Q96RL1 719 aa13.58□□□□□ -0.24
USHBP1-201ENST00000252597 NBPF3Q9H094 633 aa13.58□□□□□ -0.24
USHBP1-201ENST00000252597 TUBE1Q9UJT0 475 aa13.58□□□□□ -0.24
USHBP1-201ENST00000252597 ERLIN1O75477 346 aa13.57□□□□□ -0.24
USHBP1-201ENST00000252597 UBXN1Q04323 297 aa13.57□□□□□ -0.24
USHBP1-201ENST00000252597 ANKRD20A12PQ8NF67 263 aa13.57□□□□□ -0.24
USHBP1-201ENST00000252597 RIN2Q8WYP3 895 aaPredicted RBP13.57□□□□□ -0.24
USHBP1-201ENST00000252597 PNKPQ96T60 521 aa13.57□□□□□ -0.24
USHBP1-201ENST00000252597 MRFAP1Q9Y605 127 aa13.57□□□□□ -0.24
USHBP1-201ENST00000252597 KDM6AO15550 1401 aaPredicted RBP13.57□□□□□ -0.24
USHBP1-201ENST00000252597 MACROD2A1Z1Q3 448 aa13.57□□□□□ -0.24
USHBP1-201ENST00000252597 PPP6R2O75170 966 aa13.57□□□□□ -0.24
USHBP1-201ENST00000252597 CYP7A1P22680 504 aa13.57□□□□□ -0.24
USHBP1-201ENST00000252597 TXLNAP40222 546 aa13.57□□□□□ -0.24
USHBP1-201ENST00000252597 TOB1P50616 345 aaPredicted RBP13.57□□□□□ -0.24
USHBP1-201ENST00000252597 FXR1P51114 621 aaKnown RBP eCLIP13.57□□□□□ -0.24
USHBP1-201ENST00000252597 EIF5P55010 431 aaKnown RBP13.57□□□□□ -0.24
USHBP1-201ENST00000252597 LCORLQ8N3X6 602 aa13.57□□□□□ -0.24
USHBP1-201ENST00000252597 MLKLQ8NB16 471 aa13.57□□□□□ -0.24
USHBP1-201ENST00000252597 BPIFA3Q9BQP9 254 aa13.57□□□□□ -0.24
USHBP1-201ENST00000252597 LY9Q9HBG7 655 aa13.57□□□□□ -0.24
USHBP1-201ENST00000252597 PHRF1Q9P1Y6 1649 aaKnown RBP13.57□□□□□ -0.24
USHBP1-201ENST00000252597 FOXR1Q6PIV2 292 aa13.57□□□□□ -0.24
USHBP1-201ENST00000252597 PIK3AP1Q6ZUJ8 805 aa13.57□□□□□ -0.24
USHBP1-201ENST00000252597 CWC15Q9P013 229 aaKnown RBP13.57□□□□□ -0.24
USHBP1-201ENST00000252597 MAP3K9P80192 1104 aa13.56□□□□□ -0.24
USHBP1-201ENST00000252597 LRP10Q7Z4F1 713 aa13.56□□□□□ -0.24
USHBP1-201ENST00000252597 CCDC24Q8N4L8 307 aa13.56□□□□□ -0.24
USHBP1-201ENST00000252597 JADE2Q9NQC1 790 aa13.56□□□□□ -0.24
USHBP1-201ENST00000252597 STRCQ7RTU9 1775 aa13.56□□□□□ -0.24
USHBP1-201ENST00000252597 GOLGA6L9A6NEM1 432 aa13.56□□□□□ -0.24
USHBP1-201ENST00000252597 ZPR1O75312 459 aa13.56□□□□□ -0.24
USHBP1-201ENST00000252597 CD44P16070 742 aaKnown RBP13.56□□□□□ -0.24
USHBP1-201ENST00000252597 XBP1P17861 261 aa13.56□□□□□ -0.24
USHBP1-201ENST00000252597 NLRP5P59047 1200 aa13.56□□□□□ -0.24
USHBP1-201ENST00000252597 VSNL1P62760 191 aa13.56□□□□□ -0.24
USHBP1-201ENST00000252597 RASGRP4Q8TDF6 673 aa13.56□□□□□ -0.24
USHBP1-201ENST00000252597 WASF1Q92558 559 aa13.56□□□□□ -0.24
USHBP1-201ENST00000252597 MAP3K14Q99558 947 aa13.56□□□□□ -0.24
USHBP1-201ENST00000252597 EIF3JO75822 258 aaKnown RBP13.56□□□□□ -0.24
USHBP1-201ENST00000252597 ZRANB2O95218 330 aaKnown RBP eCLIP13.56□□□□□ -0.24
USHBP1-201ENST00000252597 ADAMTS2O95450 1211 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms