RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 CDC25BP30305 580 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 ACTN2P35609 894 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 EIF5P55010 431 aaKnown RBP13.06□□□□□ -0.32
SOX9-201ENST00000245479 CHRNDQ07001 517 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 PUM3Q15397 648 aaKnown RBP13.06□□□□□ -0.32
SOX9-201ENST00000245479 IQCA1Q86XH1 822 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 GPKOWQ92917 476 aaPredicted RBP eCLIP13.06□□□□□ -0.32
SOX9-201ENST00000245479 PDE11AQ9HCR9 933 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 JRKLQ9Y4A0 524 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 PCDHA5Q9Y5H7 936 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 ERVV-2B6SEH9 535 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 XBP1P17861 261 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 PIK3AP1Q6ZUJ8 805 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 SLC51AQ86UW1 340 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 AFAP1L1Q8TED9 768 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 MAP3K15Q6ZN16 1313 aa13.05□□□□□ -0.32
SOX9-201ENST00000245479 RBM5P52756 815 aaKnown RBP eCLIP13.05□□□□□ -0.32
SOX9-201ENST00000245479 GBP6Q6ZN66 633 aa13.05□□□□□ -0.32
SOX9-201ENST00000245479 MICALCLQ6ZW33 695 aa13.05□□□□□ -0.32
SOX9-201ENST00000245479 OTUD6BQ8N6M0 293 aa13.05□□□□□ -0.32
SOX9-201ENST00000245479 LINC00301Q8NCQ3 95 aa13.05□□□□□ -0.32
SOX9-201ENST00000245479 CYP2D6P10635 497 aa13.05□□□□□ -0.32
SOX9-201ENST00000245479 ANTXR2P58335 489 aa13.05□□□□□ -0.32
SOX9-201ENST00000245479 TTF1Q15361 905 aaPredicted RBP13.05□□□□□ -0.32
SOX9-201ENST00000245479 CTCFLQ8NI51 663 aaPredicted RBP13.05□□□□□ -0.32
SOX9-201ENST00000245479 TMEM232C9JQI7 657 aa13.05□□□□□ -0.32
SOX9-201ENST00000245479 MPHOSPH10O00566 681 aaKnown RBP13.05□□□□□ -0.32
SOX9-201ENST00000245479 PCCAP05165 728 aaPredicted RBP13.05□□□□□ -0.32
SOX9-201ENST00000245479 CYP2C19P33261 490 aa13.05□□□□□ -0.32
SOX9-201ENST00000245479 NF2P35240 595 aa13.05□□□□□ -0.32
SOX9-201ENST00000245479 HEATR3Q7Z4Q2 680 aa13.05□□□□□ -0.32
SOX9-201ENST00000245479 JADE2Q9NQC1 790 aa13.05□□□□□ -0.32
SOX9-201ENST00000245479 MKRN1Q9UHC7 482 aaKnown RBP13.05□□□□□ -0.32
SOX9-201ENST00000245479 PCDHB6Q9Y5E3 794 aa13.05□□□□□ -0.32
SOX9-201ENST00000245479 C1orf167Q5SNV9 1468 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 CATIPQ7Z7H3 387 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 PLA2G4DQ86XP0 818 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 CEP57Q86XR8 500 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 VPS16Q9H269 839 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 UTRNP46939 3433 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 N4BP3O15049 544 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 ERFEQ4G0M1 354 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 TICAM2Q86XR7 235 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 LPIN2Q92539 896 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 EPSTI1Q96J88 318 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 PLEKHA4Q9H4M7 779 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 NEURL4Q96JN8 1562 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 ZEB2O60315 1214 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 ADD2P35612 726 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 MAP2K2P36507 400 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 LONRF2Q1L5Z9 754 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 RABL6Q3YEC7 729 aaPredicted RBP13.04□□□□□ -0.32
SOX9-201ENST00000245479 ICE2Q659A1 982 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 CAPZA3Q96KX2 299 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 BRMS1Q9HCU9 246 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 ADAM21Q9UKJ8 722 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 NFE2L3Q9Y4A8 694 aa13.04□□□□□ -0.32
SOX9-201ENST00000245479 LOC102724428A0A0B4J2F2 783 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 TRIM66O15016 1216 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 ERLIN2O94905 339 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 SIK1P57059 783 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 DIXDC1Q155Q3 683 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 ZSCAN29Q8IWY8 852 aaPredicted RBP13.03□□□□□ -0.32
SOX9-201ENST00000245479 KLHL34Q8N239 644 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 RCOR1Q9UKL0 485 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 ITSN1Q15811 1721 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 ATP2C2O75185 946 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 YEATS4O95619 227 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 KIF23Q02241 960 aaPredicted RBP13.03□□□□□ -0.32
SOX9-201ENST00000245479 ADALQ6DHV7 355 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 FAM76AQ8TAV0 307 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 DPF2Q92785 391 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 DYNLL2Q96FJ2 89 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 GDAP1L1Q96MZ0 367 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 TEX13AQ9BXU3 409 aaPredicted RBP13.03□□□□□ -0.32
SOX9-201ENST00000245479 FEZ2Q9UHY8 353 aaPredicted RBP13.03□□□□□ -0.32
SOX9-201ENST00000245479 BRD3Q15059 726 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 AKNAD1Q5T1N1 836 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 GUCA1BQ9UMX6 200 aa13.03□□□□□ -0.32
SOX9-201ENST00000245479 MED23Q9ULK4 1368 aa13.02□□□□□ -0.32
SOX9-201ENST00000245479 ATP8B1O43520 1251 aa13.02□□□□□ -0.32
SOX9-201ENST00000245479 IDEP14735 1019 aa13.02□□□□□ -0.32
SOX9-201ENST00000245479 KLRK1P26718 216 aa13.02□□□□□ -0.32
SOX9-201ENST00000245479 LIG3P49916 1009 aa13.02□□□□□ -0.32
SOX9-201ENST00000245479 USPL1Q5W0Q7 1092 aa13.02□□□□□ -0.32
SOX9-201ENST00000245479 PTF1AQ7RTS3 328 aa13.02□□□□□ -0.32
SOX9-201ENST00000245479 MAPKAPK5Q8IW41 473 aa13.02□□□□□ -0.32
SOX9-201ENST00000245479 ATRIPQ8WXE1 791 aa13.02□□□□□ -0.32
SOX9-201ENST00000245479 EXOC4Q96A65 974 aa13.02□□□□□ -0.32
SOX9-201ENST00000245479 ZNF274Q96GC6 653 aaPredicted RBP13.02□□□□□ -0.32
SOX9-201ENST00000245479 SETDB2Q96T68 719 aa13.02□□□□□ -0.32
SOX9-201ENST00000245479 CARD10Q9BWT7 1032 aa13.02□□□□□ -0.32
SOX9-201ENST00000245479 PPP2R2CQ9Y2T4 447 aa13.02□□□□□ -0.32
SOX9-201ENST00000245479 TNKSO95271 1327 aa13.02□□□□□ -0.32
SOX9-201ENST00000245479 GOLGA6L7A0A1B0GV03 622 aa13.02□□□□□ -0.33
SOX9-201ENST00000245479 PLEKHA8P1O95397 391 aa13.02□□□□□ -0.33
SOX9-201ENST00000245479 UQCRFS1P1P0C7P4 283 aa13.02□□□□□ -0.33
SOX9-201ENST00000245479 INPP5BP32019 993 aa13.02□□□□□ -0.33
SOX9-201ENST00000245479 NLRP12P59046 1061 aa13.02□□□□□ -0.33
SOX9-201ENST00000245479 TUBBP07437 444 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms