RNA–Protein interactions for RNA: ENST00000245323.4

EFNB2-201, Transcript of ephrin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB2, Length 4,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2-201ENST00000245323 BSDC1Q9NW68 430 aaPredicted RBP12.9□□□□□ -0.35
EFNB2-201ENST00000245323 A0A0G2JLW4 131 aa12.89□□□□□ -0.35
EFNB2-201ENST00000245323 HARSP12081 509 aaKnown RBP12.89□□□□□ -0.35
EFNB2-201ENST00000245323 MKRN3Q13064 507 aaKnown RBP12.89□□□□□ -0.35
EFNB2-201ENST00000245323 R3HDM1Q15032 1099 aaKnown RBP12.89□□□□□ -0.35
EFNB2-201ENST00000245323 BRAPQ7Z569 592 aa12.89□□□□□ -0.35
EFNB2-201ENST00000245323 TM6SF1Q9BZW5 370 aa12.89□□□□□ -0.35
EFNB2-201ENST00000245323 RBM28Q9NW13 759 aaKnown RBP12.89□□□□□ -0.35
EFNB2-201ENST00000245323 TBC1D7Q9P0N9 293 aa12.89□□□□□ -0.35
EFNB2-201ENST00000245323 DIP2AQ14689 1571 aa12.89□□□□□ -0.35
EFNB2-201ENST00000245323 SPDYE4A6NLX3 237 aa12.89□□□□□ -0.35
EFNB2-201ENST00000245323 SPA17Q15506 151 aa12.89□□□□□ -0.35
EFNB2-201ENST00000245323 ERMNQ8TAM6 284 aa12.89□□□□□ -0.35
EFNB2-201ENST00000245323 RRAGDQ9NQL2 400 aaPredicted RBP12.89□□□□□ -0.35
EFNB2-201ENST00000245323 ZNF277Q9NRM2 450 aaPredicted RBP12.89□□□□□ -0.35
EFNB2-201ENST00000245323 ARPP21Q9UBL0 812 aaPredicted RBP12.89□□□□□ -0.35
EFNB2-201ENST00000245323 PUF60Q9UHX1 559 aaKnown RBP12.89□□□□□ -0.35
EFNB2-201ENST00000245323 SETBP1Q9Y6X0 1596 aa12.89□□□□□ -0.35
EFNB2-201ENST00000245323 UBXN2AP68543 259 aa12.89□□□□□ -0.35
EFNB2-201ENST00000245323 SNW1Q13573 536 aaKnown RBP12.89□□□□□ -0.35
EFNB2-201ENST00000245323 UVSSAQ2YD98 709 aa12.89□□□□□ -0.35
EFNB2-201ENST00000245323 DYMQ7RTS9 669 aa12.89□□□□□ -0.35
EFNB2-201ENST00000245323 TTLL6Q8N841 843 aa12.89□□□□□ -0.35
EFNB2-201ENST00000245323 ZNF397Q8NF99 534 aaPredicted RBP12.89□□□□□ -0.35
EFNB2-201ENST00000245323 DRC1Q96MC2 740 aa12.89□□□□□ -0.35
EFNB2-201ENST00000245323 ZKSCAN5Q9Y2L8 839 aa12.89□□□□□ -0.35
EFNB2-201ENST00000245323 MACROD2A1Z1Q3 448 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 ZSCAN12O43309 604 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 KIF5CO60282 957 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 TTC38Q5R3I4 469 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 KCTD1Q719H9 257 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 ADGRB1O14514 1584 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 SMCO2A6NFE2 343 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 TRIM21P19474 475 aaKnown RBP12.88□□□□□ -0.35
EFNB2-201ENST00000245323 ICA1Q05084 483 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 CCDC102AQ96A19 550 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 ZFP91Q96JP5 570 aaPredicted RBP12.88□□□□□ -0.35
EFNB2-201ENST00000245323 PGBD1Q96JS3 809 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 MAP7D2Q96T17 732 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 ACBD3Q9H3P7 528 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 LUC7LQ9NQ29 371 aaKnown RBP12.88□□□□□ -0.35
EFNB2-201ENST00000245323 DNAI1Q9UI46 699 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 ALAS1P13196 640 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 PDIA6Q15084 440 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 AOC3Q16853 763 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 INF2Q27J81 1249 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 USP17L2Q6R6M4 530 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 TDRD3Q9H7E2 651 aaKnown RBP12.88□□□□□ -0.35
EFNB2-201ENST00000245323 GPR108Q9NPR9 543 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 KCNH3Q9ULD8 1083 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.88□□□□□ -0.35
EFNB2-201ENST00000245323 RILPL1Q5EBL4 403 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 CLIC6Q96NY7 704 aa12.88□□□□□ -0.35
EFNB2-201ENST00000245323 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.88□□□□□ -0.35
EFNB2-201ENST00000245323 ERICH4A6NGS2 130 aa12.87□□□□□ -0.35
EFNB2-201ENST00000245323 SNAP25P60880 206 aa12.87□□□□□ -0.35
EFNB2-201ENST00000245323 APOA5Q6Q788 366 aa12.87□□□□□ -0.35
EFNB2-201ENST00000245323 KANK3Q6NY19 840 aa12.87□□□□□ -0.35
EFNB2-201ENST00000245323 DHX37Q8IY37 1157 aaKnown RBP12.87□□□□□ -0.35
EFNB2-201ENST00000245323 IQUBQ8NA54 791 aa12.87□□□□□ -0.35
EFNB2-201ENST00000245323 MTMR6Q9Y217 621 aa12.87□□□□□ -0.35
EFNB2-201ENST00000245323 TMEM232C9JQI7 657 aa12.87□□□□□ -0.35
EFNB2-201ENST00000245323 BLZF1Q9H2G9 400 aa12.87□□□□□ -0.35
EFNB2-201ENST00000245323 TMOD4Q9NZQ9 345 aa12.87□□□□□ -0.35
EFNB2-201ENST00000245323 CEP170BQ9Y4F5 1589 aaPredicted RBP12.87□□□□□ -0.35
EFNB2-201ENST00000245323 PREX1Q8TCU6 1659 aa12.87□□□□□ -0.35
EFNB2-201ENST00000245323 BMP15O95972 392 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 CDC25AP30304 524 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 NCAPH2Q6IBW4 605 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 MXD3Q9BW11 206 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 NMT2O60551 498 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 YEATS4O95619 227 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 CASQ1P31415 396 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 CCT6AP40227 531 aaKnown RBP12.86□□□□□ -0.35
EFNB2-201ENST00000245323 FAM160A1Q05DH4 1040 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 PTF1AQ7RTS3 328 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 MTERF4Q7Z6M4 381 aaKnown RBP12.86□□□□□ -0.35
EFNB2-201ENST00000245323 TTC16Q8NEE8 873 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 CD209Q9NNX6 404 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 SSH2Q76I76 1423 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 NPR1P16066 1061 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 GSDMDP57764 484 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 TBC1D10BQ4KMP7 808 aaPredicted RBP12.86□□□□□ -0.35
EFNB2-201ENST00000245323 MYSM1Q5VVJ2 828 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 REXO1Q8N1G1 1221 aaKnown RBP12.86□□□□□ -0.35
EFNB2-201ENST00000245323 SH3RF3Q8TEJ3 882 aaPredicted RBP12.86□□□□□ -0.35
EFNB2-201ENST00000245323 SPATA31A5Q5VU36 1347 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 SPATA31A7Q8IWB4 1347 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 PSMA7O14818 248 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 POLR3GO15318 223 aaPredicted RBP12.86□□□□□ -0.35
EFNB2-201ENST00000245323 CLCN1P35523 988 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 NR5A1Q13285 461 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 ZNF827Q17R98 1081 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 CEP135Q66GS9 1140 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 DPY19L2Q6NUT2 758 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 ATG9AQ7Z3C6 839 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 SMCR8Q8TEV9 937 aaPredicted RBP12.86□□□□□ -0.35
EFNB2-201ENST00000245323 STRBPQ96SI9 672 aaKnown RBP12.86□□□□□ -0.35
EFNB2-201ENST00000245323 SERPINB13Q9UIV8 391 aa12.86□□□□□ -0.35
EFNB2-201ENST00000245323 MTX1Q13505 466 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms