RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 ZBTB8OSQ8IWT0 167 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 PARP2Q9UGN5 583 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 PCDHB13Q9Y5F0 798 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 TPD52P55327 224 aaPredicted RBP8.17□□□□□ -1.1
SSR1-201ENST00000244763 PLEKHM2Q8IWE5 1019 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 SPATA5Q8NB90 893 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 SLC17A8Q8NDX2 589 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 ATRIPQ8WXE1 791 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 DSCC1Q9BVC3 393 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 ARMT1Q9H993 441 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 SARNPP82979 210 aaKnown RBP8.17□□□□□ -1.1
SSR1-201ENST00000244763 TTC38Q5R3I4 469 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 KRT222Q8N1A0 295 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 BAG1Q99933 345 aaPredicted RBP8.17□□□□□ -1.1
SSR1-201ENST00000244763 IMPACTQ9P2X3 320 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 DNAJC5BQ9UF47 199 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.17□□□□□ -1.1
SSR1-201ENST00000244763 MAST1Q9Y2H9 1570 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 NUP153P49790 1475 aaKnown RBP8.17□□□□□ -1.1
SSR1-201ENST00000244763 ATF7P17544 494 aaPredicted RBP8.17□□□□□ -1.1
SSR1-201ENST00000244763 TXKP42681 527 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 NT5C2P49902 561 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 DCUN1D2Q6PH85 259 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 ATP2A3Q93084 1043 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 HAUS1Q96CS2 278 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 TCEANC2Q96MN5 208 aa8.17□□□□□ -1.1
SSR1-201ENST00000244763 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.17□□□□□ -1.1
SSR1-201ENST00000244763 FBLN1P23142 703 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 POLR2BP30876 1174 aaKnown RBP8.16□□□□□ -1.1
SSR1-201ENST00000244763 PPP2R5EQ16537 467 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 CCDC186Q7Z3E2 898 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 CSGALNACT2Q8N6G5 542 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 SNX29Q8TEQ0 813 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 ZSWIM4Q9H7M6 989 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 KRT9P35527 623 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 ANO1Q5XXA6 986 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 CPLX4Q7Z7G2 160 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 MYCT1Q8N699 235 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 MLXIPQ9HAP2 919 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 ZRANB1Q9UGI0 708 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 FAM160A1Q05DH4 1040 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 LRWD1Q9UFC0 647 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 TRPC5Q9UL62 973 aaPredicted RBP8.16□□□□□ -1.1
SSR1-201ENST00000244763 GUCA1BQ9UMX6 200 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 ADAMTS12P58397 1594 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 ARHGEF37A1IGU5 675 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 CCNA1P78396 465 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 NCAPH2Q6IBW4 605 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 CPXCR1Q8N123 301 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 TCOF1Q13428 1488 aaKnown RBP8.16□□□□□ -1.1
SSR1-201ENST00000244763 FLOT1O75955 427 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 GCNT3O95395 438 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 HARSP12081 509 aaKnown RBP8.16□□□□□ -1.1
SSR1-201ENST00000244763 NOLC1Q14978 699 aaKnown RBP eCLIP8.16□□□□□ -1.1
SSR1-201ENST00000244763 REXO1Q8N1G1 1221 aaKnown RBP8.16□□□□□ -1.1
SSR1-201ENST00000244763 CCDC17Q96LX7 622 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 V9GY48 417 aaPredicted RBP8.16□□□□□ -1.1
SSR1-201ENST00000244763 YEATS2Q9ULM3 1422 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 ZBTB7BO15156 539 aaPredicted RBP8.16□□□□□ -1.1
SSR1-201ENST00000244763 PAK1Q13153 545 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 ZNF569Q5MCW4 686 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 CCDC122Q5T0U0 273 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 ARHGEF16Q5VV41 709 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 PPP1R9BQ96SB3 815 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 SAMD15Q9P1V8 674 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 HERC4Q5GLZ8 1057 aaPredicted RBP8.16□□□□□ -1.1
SSR1-201ENST00000244763 PIK3AP1Q6ZUJ8 805 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 MRPL44Q9H9J2 332 aaKnown RBP8.16□□□□□ -1.1
SSR1-201ENST00000244763 KCNH3Q9ULD8 1083 aa8.16□□□□□ -1.1
SSR1-201ENST00000244763 SUPT20HL1Q3ZLR7 823 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 DEPTORQ8TB45 409 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 FAM193BQ96PV7 902 aaPredicted RBP8.15□□□□□ -1.1
SSR1-201ENST00000244763 SLC27A2O14975 620 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 CFBP00751 764 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 CTSWP56202 376 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 STX17P56962 302 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 MCM6Q14566 821 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 PDZD4Q76G19 769 aaPredicted RBP8.15□□□□□ -1.1
SSR1-201ENST00000244763 N4BP1O75113 896 aaKnown RBP8.15□□□□□ -1.1
SSR1-201ENST00000244763 CBX1P83916 185 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 RASA3Q14644 834 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 ZBTB38Q8NAP3 1195 aaPredicted RBP8.15□□□□□ -1.1
SSR1-201ENST00000244763 RAB3IPQ96QF0 476 aaPredicted RBP8.15□□□□□ -1.1
SSR1-201ENST00000244763 SELENOSQ9BQE4 189 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 IFNKQ9P0W0 207 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 LEMD3Q9Y2U8 911 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 PALM3A6NDB9 673 aaPredicted RBP8.15□□□□□ -1.1
SSR1-201ENST00000244763 POLR2DO15514 142 aaKnown RBP8.15□□□□□ -1.1
SSR1-201ENST00000244763 CCDC25Q86WR0 208 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 FAM81BQ96LP2 452 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 CFAP43Q8NDM7 1665 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 SEMA3EO15041 775 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 YARSP54577 528 aaKnown RBP8.15□□□□□ -1.1
SSR1-201ENST00000244763 GABPAQ06546 454 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 SND1Q7KZF4 910 aaKnown RBP eCLIP8.15□□□□□ -1.17e-8■■■□□ 15.4
SSR1-201ENST00000244763 RSPH3Q86UC2 560 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.15□□□□□ -1.17e-8■■■□□ 15.1
SSR1-201ENST00000244763 ATP7AQ04656 1500 aa8.15□□□□□ -1.1
SSR1-201ENST00000244763 GAS7O60861 476 aa8.15□□□□□ -1.11
SSR1-201ENST00000244763 FYB2Q5VWT5 728 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms