RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 C21orf2O43822 256 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 MRE11P49959 708 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 SCNN1DP51172 638 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 FKBP1AP62942 108 aaKnown RBP16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 KIAA2012Q0VF49 1180 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 FUT2Q10981 343 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 TPRNQ4KMQ1 711 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 DACT2Q5SW24 774 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 STRIP1Q5VSL9 837 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 C16orf86Q6ZW13 317 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 CATIPQ7Z7H3 387 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 ANKS1AQ92625 1134 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 GRPEL1Q9HAV7 217 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 MYH15Q9Y2K3 1946 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 ZNF646O15015 1829 aaPredicted RBP16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 SYCE3A1L190 88 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 WDHD1O75717 1129 aaPredicted RBP16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 DDAH1O94760 285 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 RASA1P20936 1047 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 AOC3Q16853 763 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 APOBEC3HQ6NTF7 200 aaKnown RBP16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 SYAP1Q96A49 352 aaPredicted RBP16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 MKNK2Q9HBH9 465 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 TCP11L1Q9NUJ3 509 aa16.01■□□□□ 0.15
SNRNP27-201ENST00000244227 ECM29Q5VYK3 1845 aa16■□□□□ 0.15
SNRNP27-201ENST00000244227 SCN9AQ15858 1988 aa16■□□□□ 0.15
SNRNP27-201ENST00000244227 DPEP1P16444 411 aa16■□□□□ 0.15
SNRNP27-201ENST00000244227 CDK8P49336 464 aa16■□□□□ 0.15
SNRNP27-201ENST00000244227 LRSAM1Q6UWE0 723 aa16■□□□□ 0.15
SNRNP27-201ENST00000244227 DGKHQ86XP1 1220 aa16■□□□□ 0.15
SNRNP27-201ENST00000244227 CCDC82Q8N4S0 544 aa16■□□□□ 0.15
SNRNP27-201ENST00000244227 TTLL6Q8N841 843 aa16■□□□□ 0.15
SNRNP27-201ENST00000244227 ZNF396Q96N95 335 aaPredicted RBP16■□□□□ 0.15
SNRNP27-201ENST00000244227 MRIQ9BWK5 157 aa16■□□□□ 0.15
SNRNP27-201ENST00000244227 DDX4Q9NQI0 724 aaKnown RBP16■□□□□ 0.15
SNRNP27-201ENST00000244227 FOCADQ5VW36 1801 aa15.99■□□□□ 0.15
SNRNP27-201ENST00000244227 CALM1P0DP23 149 aa15.99■□□□□ 0.15
SNRNP27-201ENST00000244227 CALM2P0DP24 149 aa15.99■□□□□ 0.15
SNRNP27-201ENST00000244227 CALM3P0DP25 149 aa15.99■□□□□ 0.15
SNRNP27-201ENST00000244227 CEBPZQ03701 1054 aaKnown RBP15.99■□□□□ 0.15
SNRNP27-201ENST00000244227 CDC42EP5Q6NZY7 148 aa15.99■□□□□ 0.15
SNRNP27-201ENST00000244227 BRAPQ7Z569 592 aa15.99■□□□□ 0.15
SNRNP27-201ENST00000244227 CCDC125Q86Z20 511 aa15.99■□□□□ 0.15
SNRNP27-201ENST00000244227 USP17L3A6NCW0 530 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 USP17L4A6NCW7 530 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 PLEKHA8P1O95397 391 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 DEXIO95424 95 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 LIG1P18858 919 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 CCDC183Q5T5S1 534 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 MYSM1Q5VVJ2 828 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 USP17L1Q7RTZ2 530 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 TRIM22Q8IYM9 498 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 ZNF444Q8N0Y2 327 aaPredicted RBP15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 SUPT20HQ8NEM7 779 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 WASF1Q92558 559 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 TEKT1Q969V4 418 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 RNF26Q9BY78 433 aaPredicted RBP15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 USP40Q9NVE5 1235 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 RBM28Q9NW13 759 aaKnown RBP15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 RTEL1Q9NZ71 1219 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 ADAMTSL1Q8N6G6 1762 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 CRKP46108 304 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 PKN1Q16512 942 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 ZDHHC15Q96MV8 337 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 PCDHAC2Q9Y5I4 1007 aa15.98■□□□□ 0.15
SNRNP27-201ENST00000244227 YDJCA8MPS7 323 aa15.97■□□□□ 0.15
SNRNP27-201ENST00000244227 PRPF3O43395 683 aaKnown RBP15.97■□□□□ 0.15
SNRNP27-201ENST00000244227 TSPY3P0CV98 308 aa15.97■□□□□ 0.15
SNRNP27-201ENST00000244227 TSPY8P0CW00 308 aa15.97■□□□□ 0.15
SNRNP27-201ENST00000244227 U2AF2P26368 475 aaKnown RBP eCLIP15.97■□□□□ 0.151e-7■■□□□ 13
SNRNP27-201ENST00000244227 GABPAQ06546 454 aa15.97■□□□□ 0.15
SNRNP27-201ENST00000244227 PICALMQ13492 652 aa15.97■□□□□ 0.15
SNRNP27-201ENST00000244227 TMTC3Q6ZXV5 915 aa15.97■□□□□ 0.15
SNRNP27-201ENST00000244227 KIAA0825Q8IV33 1275 aa15.97■□□□□ 0.15
SNRNP27-201ENST00000244227 SHISA4Q96DD7 197 aa15.97■□□□□ 0.15
SNRNP27-201ENST00000244227 MYH1P12882 1939 aa15.97■□□□□ 0.15
SNRNP27-201ENST00000244227 PPIP5K2O43314 1243 aa15.96■□□□□ 0.15
SNRNP27-201ENST00000244227 HDLBPQ00341 1268 aaKnown RBP15.96■□□□□ 0.15
SNRNP27-201ENST00000244227 GRIPAP1Q4V328 841 aa15.96■□□□□ 0.15
SNRNP27-201ENST00000244227 CCDC93Q567U6 631 aa15.96■□□□□ 0.15
SNRNP27-201ENST00000244227 CCDC178Q5BJE1 867 aa15.96■□□□□ 0.15
SNRNP27-201ENST00000244227 NEDD1Q8NHV4 660 aa15.96■□□□□ 0.15
SNRNP27-201ENST00000244227 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.96■□□□□ 0.15
SNRNP27-201ENST00000244227 PANK2Q9BZ23 570 aa15.96■□□□□ 0.15
SNRNP27-201ENST00000244227 ZNF287Q9HBT7 754 aa15.96■□□□□ 0.15
SNRNP27-201ENST00000244227 CLIC4Q9Y696 253 aa15.96■□□□□ 0.15
SNRNP27-201ENST00000244227 KIF13BQ9NQT8 1826 aa15.96■□□□□ 0.15
SNRNP27-201ENST00000244227 ZBTB7AO95365 584 aa15.96■□□□□ 0.14
SNRNP27-201ENST00000244227 MMP1P03956 469 aa15.96■□□□□ 0.14
SNRNP27-201ENST00000244227 NASPP49321 788 aaPredicted RBP15.96■□□□□ 0.14
SNRNP27-201ENST00000244227 TRIM29Q14134 588 aa15.96■□□□□ 0.14
SNRNP27-201ENST00000244227 RTKN2Q8IZC4 609 aa15.96■□□□□ 0.14
SNRNP27-201ENST00000244227 SRBD1Q8N5C6 995 aaKnown RBP15.96■□□□□ 0.14
SNRNP27-201ENST00000244227 LINC00301Q8NCQ3 95 aa15.96■□□□□ 0.14
SNRNP27-201ENST00000244227 PSMD1Q99460 953 aa15.96■□□□□ 0.14
SNRNP27-201ENST00000244227 RBSNQ9H1K0 784 aa15.96■□□□□ 0.14
SNRNP27-201ENST00000244227 POLR3EQ9NVU0 708 aa15.96■□□□□ 0.14
SNRNP27-201ENST00000244227 CNTNAP5Q8WYK1 1306 aa15.95■□□□□ 0.14
SNRNP27-201ENST00000244227 NOVP48745 357 aa15.95■□□□□ 0.14
SNRNP27-201ENST00000244227 NFIAQ12857 509 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms