RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 DCUN1D2Q6PH85 259 aa15.33■□□□□ 0.04
TARDBP-201ENST00000240185 WAPLQ7Z5K2 1190 aa15.33■□□□□ 0.04
TARDBP-201ENST00000240185 MAIP1Q8WWC4 291 aa15.33■□□□□ 0.04
TARDBP-201ENST00000240185 ZC4H2Q9NQZ6 224 aa15.33■□□□□ 0.04
TARDBP-201ENST00000240185 CHPF2Q9P2E5 772 aa15.33■□□□□ 0.04
TARDBP-201ENST00000240185 TOPBP1Q92547 1522 aa15.32■□□□□ 0.04
TARDBP-201ENST00000240185 HMGB1P1B2RPK0 211 aaPredicted RBP15.32■□□□□ 0.04
TARDBP-201ENST00000240185 RAD51AP2Q09MP3 1159 aa15.32■□□□□ 0.04
TARDBP-201ENST00000240185 SFMBT2Q5VUG0 894 aa15.32■□□□□ 0.04
TARDBP-201ENST00000240185 MRPL50Q8N5N7 158 aaKnown RBP15.32■□□□□ 0.04
TARDBP-201ENST00000240185 TMEM63CQ9P1W3 806 aa15.32■□□□□ 0.04
TARDBP-201ENST00000240185 PDCD7Q8N8D1 485 aaKnown RBP15.32■□□□□ 0.04
TARDBP-201ENST00000240185 CCDC89Q8N998 374 aa15.32■□□□□ 0.04
TARDBP-201ENST00000240185 ZBTB12Q9Y330 459 aaPredicted RBP15.32■□□□□ 0.04
TARDBP-201ENST00000240185 A0A087WUV0 522 aaPredicted RBP15.32■□□□□ 0.04
TARDBP-201ENST00000240185 ALDH1L1O75891 902 aa15.32■□□□□ 0.04
TARDBP-201ENST00000240185 SLC12A2P55011 1212 aa15.32■□□□□ 0.04
TARDBP-201ENST00000240185 PDCD2Q16342 344 aaPredicted RBP15.32■□□□□ 0.04
TARDBP-201ENST00000240185 NXNQ6DKJ4 435 aa15.32■□□□□ 0.04
TARDBP-201ENST00000240185 NLRP7Q8WX94 980 aa15.32■□□□□ 0.04
TARDBP-201ENST00000240185 DESI2Q9BSY9 194 aa15.32■□□□□ 0.04
TARDBP-201ENST00000240185 POLKQ9UBT6 870 aa15.32■□□□□ 0.04
TARDBP-201ENST00000240185 CALUO43852 315 aaPredicted RBP15.32■□□□□ 0.04
TARDBP-201ENST00000240185 HARSP12081 509 aaKnown RBP15.32■□□□□ 0.04
TARDBP-201ENST00000240185 RPS6KB1P23443 525 aa15.32■□□□□ 0.04
TARDBP-201ENST00000240185 CCDC152Q4G0S7 254 aa15.32■□□□□ 0.04
TARDBP-201ENST00000240185 TEX13AQ9BXU3 409 aaPredicted RBP15.32■□□□□ 0.04
TARDBP-201ENST00000240185 SUN1O94901 812 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 CEP85Q6P2H3 762 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 KSR1Q8IVT5 923 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 TRMT44Q8IYL2 757 aaKnown RBP15.31■□□□□ 0.04
TARDBP-201ENST00000240185 FBXO41Q8TF61 875 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 CCDC51Q96ER9 411 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 HYOU1Q9Y4L1 999 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 LRMPQ12912 555 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 PALM2Q8IXS6 379 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 N4BP2L2Q92802 583 aaPredicted RBP15.31■□□□□ 0.04
TARDBP-201ENST00000240185 RNF34Q969K3 372 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 SNRPA1P09661 255 aaKnown RBP15.31■□□□□ 0.04
TARDBP-201ENST00000240185 RRAGAQ7L523 313 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 CCDC197Q8NCU1 140 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 SCOCQ9UIL1 159 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 AMFRQ9UKV5 643 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 KRIT1O00522 736 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 HMGB2P26583 209 aaKnown RBP15.31■□□□□ 0.04
TARDBP-201ENST00000240185 PICALMQ13492 652 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 POSTNQ15063 836 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 SIRT1Q96EB6 747 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 FAM207AQ9NSI2 230 aaPredicted RBP15.31■□□□□ 0.04
TARDBP-201ENST00000240185 ANKFY1Q9P2R3 1169 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 PRDM2Q13029 1718 aa15.31■□□□□ 0.04
TARDBP-201ENST00000240185 SLC8A3P57103 927 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 KCTD16Q68DU8 428 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 ZNF622Q969S3 477 aaKnown RBP eCLIP15.3■□□□□ 0.043e-23■□□□□ 9.1
TARDBP-201ENST00000240185 SDCCAG3Q96C92 435 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 KRT12Q99456 494 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 EVI5O60447 810 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 C2CD5Q86YS7 1000 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 NAP1L4Q99733 375 aaKnown RBP15.3■□□□□ 0.04
TARDBP-201ENST00000240185 NCAPGQ9BPX3 1015 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 MCM9Q9NXL9 1143 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 TNNQ9UQP3 1299 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 KCNK3O14649 394 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 CNGA1P29973 690 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 ESRRGP62508 458 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 LLPHQ9BRT6 129 aaKnown RBP15.3■□□□□ 0.04
TARDBP-201ENST00000240185 PPP2R2CQ9Y2T4 447 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 TTC21BQ7Z4L5 1316 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 BACH1O14867 736 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 KRT3P12035 628 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 APBA1Q02410 837 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 CCDC117Q8IWD4 279 aaPredicted RBP15.3■□□□□ 0.04
TARDBP-201ENST00000240185 UHMK1Q8TAS1 419 aaKnown RBP15.3■□□□□ 0.04
TARDBP-201ENST00000240185 NUCKS1Q9H1E3 243 aaKnown RBP15.3■□□□□ 0.04
TARDBP-201ENST00000240185 DPH5Q9H2P9 285 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 MYO1AQ9UBC5 1043 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 AMOTL2Q9Y2J4 779 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 SCINQ9Y6U3 715 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 DEXIO95424 95 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 PIK3AP1Q6ZUJ8 805 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 SCYL3Q8IZE3 742 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 MIGA1Q8NAN2 632 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 NELFBQ8WX92 580 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 NLRC4Q9NPP4 1024 aa15.3■□□□□ 0.04
TARDBP-201ENST00000240185 IFNB1P01574 187 aa15.29■□□□□ 0.04
TARDBP-201ENST00000240185 NCOA1Q15788 1441 aa15.29■□□□□ 0.04
TARDBP-201ENST00000240185 PROCA1Q8NCQ7 364 aaPredicted RBP15.29■□□□□ 0.04
TARDBP-201ENST00000240185 OR8K1Q8NGG5 319 aa15.29■□□□□ 0.04
TARDBP-201ENST00000240185 XAGE3Q8WTP9 111 aa15.29■□□□□ 0.04
TARDBP-201ENST00000240185 CCDC169A6NNP5 214 aa15.29■□□□□ 0.04
TARDBP-201ENST00000240185 SART1O43290 800 aaKnown RBP15.29■□□□□ 0.04
TARDBP-201ENST00000240185 PHBP35232 272 aa15.29■□□□□ 0.04
TARDBP-201ENST00000240185 FCHSD1Q86WN1 690 aa15.29■□□□□ 0.04
TARDBP-201ENST00000240185 DIS3L2Q8IYB7 885 aaKnown RBP15.29■□□□□ 0.04
TARDBP-201ENST00000240185 BAG5Q9UL15 447 aa15.29■□□□□ 0.04
TARDBP-201ENST00000240185 TAF11Q15544 211 aa15.29■□□□□ 0.04
TARDBP-201ENST00000240185 BSPRYQ5W0U4 402 aa15.29■□□□□ 0.04
TARDBP-201ENST00000240185 LRRC8CQ8TDW0 803 aa15.29■□□□□ 0.04
TARDBP-201ENST00000240185 RIC8AQ9NPQ8 531 aa15.29■□□□□ 0.04
TARDBP-201ENST00000240185 SP4Q02446 784 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms