RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 CLIC4Q9Y696 253 aa26.94■■□□□ 1.9
MSX2-201ENST00000239243 BTDP43251 543 aa26.94■■□□□ 1.9
MSX2-201ENST00000239243 CCDC178Q5BJE1 867 aa26.94■■□□□ 1.9
MSX2-201ENST00000239243 MPNDQ8N594 471 aa26.94■■□□□ 1.9
MSX2-201ENST00000239243 MMP1P03956 469 aa26.93■■□□□ 1.9
MSX2-201ENST00000239243 XBP1P17861 261 aa26.93■■□□□ 1.9
MSX2-201ENST00000239243 TROAPQ12815 778 aa26.93■■□□□ 1.9
MSX2-201ENST00000239243 MRPS27Q92552 414 aaKnown RBP26.93■■□□□ 1.9
MSX2-201ENST00000239243 ZC3H12CQ9C0D7 883 aaKnown RBP26.93■■□□□ 1.9
MSX2-201ENST00000239243 ZNF287Q9HBT7 754 aa26.93■■□□□ 1.9
MSX2-201ENST00000239243 KINO60870 393 aaKnown RBP26.92■■□□□ 1.9
MSX2-201ENST00000239243 TGFBRAP1Q8WUH2 860 aa26.92■■□□□ 1.9
MSX2-201ENST00000239243 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.92■■□□□ 1.9
MSX2-201ENST00000239243 COL11A2P13942 1736 aaPredicted RBP26.92■■□□□ 1.9
MSX2-201ENST00000239243 JMYQ8N9B5 988 aa26.92■■□□□ 1.9
MSX2-201ENST00000239243 FSIP1Q8NA03 581 aa26.92■■□□□ 1.9
MSX2-201ENST00000239243 GAKO14976 1311 aa26.91■■□□□ 1.9
MSX2-201ENST00000239243 TYRO3Q06418 890 aa26.91■■□□□ 1.9
MSX2-201ENST00000239243 DPP8Q6V1X1 898 aaPredicted RBP26.91■■□□□ 1.9
MSX2-201ENST00000239243 CTCFLQ8NI51 663 aaPredicted RBP26.91■■□□□ 1.9
MSX2-201ENST00000239243 FOXP1Q9H334 677 aaPredicted RBP26.91■■□□□ 1.9
MSX2-201ENST00000239243 GUCY1A2P33402 732 aa26.9■■□□□ 1.9
MSX2-201ENST00000239243 EVX2Q03828 476 aa26.9■■□□□ 1.9
MSX2-201ENST00000239243 SLC39A14Q15043 492 aa26.9■■□□□ 1.9
MSX2-201ENST00000239243 HS1BP3Q53T59 392 aa26.9■■□□□ 1.9
MSX2-201ENST00000239243 FAM47AQ5JRC9 791 aa26.9■■□□□ 1.9
MSX2-201ENST00000239243 MKNK2Q9HBH9 465 aa26.9■■□□□ 1.9
MSX2-201ENST00000239243 SASS6Q6UVJ0 657 aa26.9■■□□□ 1.9
MSX2-201ENST00000239243 NOSTRINQ8IVI9 506 aa26.9■■□□□ 1.9
MSX2-201ENST00000239243 TEX11Q8IYF3 940 aa26.9■■□□□ 1.9
MSX2-201ENST00000239243 CCDC82Q8N4S0 544 aa26.9■■□□□ 1.9
MSX2-201ENST00000239243 ENGASEQ8NFI3 743 aa26.9■■□□□ 1.9
MSX2-201ENST00000239243 GOLPH3LQ9H4A5 285 aa26.9■■□□□ 1.9
MSX2-201ENST00000239243 MYH6P13533 1939 aa26.9■■□□□ 1.9
MSX2-201ENST00000239243 PRPF3O43395 683 aaKnown RBP26.89■■□□□ 1.9
MSX2-201ENST00000239243 DGKHQ86XP1 1220 aa26.89■■□□□ 1.9
MSX2-201ENST00000239243 CKAP2LQ8IYA6 745 aa26.89■■□□□ 1.9
MSX2-201ENST00000239243 RIMBP2O15034 1052 aa26.89■■□□□ 1.89
MSX2-201ENST00000239243 PPP6R2O75170 966 aa26.89■■□□□ 1.89
MSX2-201ENST00000239243 GTF2IP78347 998 aa26.89■■□□□ 1.89
MSX2-201ENST00000239243 SNW1Q13573 536 aaKnown RBP26.89■■□□□ 1.89
MSX2-201ENST00000239243 DIS3L2Q8IYB7 885 aaKnown RBP26.89■■□□□ 1.89
MSX2-201ENST00000239243 EYA3Q99504 573 aa26.89■■□□□ 1.89
MSX2-201ENST00000239243 CDK5RAP2Q96SN8 1893 aa26.88■■□□□ 1.89
MSX2-201ENST00000239243 CAVIN2O95810 425 aa26.88■■□□□ 1.89
MSX2-201ENST00000239243 CMTR1Q8N1G2 835 aaKnown RBP26.88■■□□□ 1.89
MSX2-201ENST00000239243 UBE2Q2LH0YL09 131 aa26.88■■□□□ 1.89
MSX2-201ENST00000239243 TFAP4Q01664 338 aa26.88■■□□□ 1.89
MSX2-201ENST00000239243 TMTC3Q6ZXV5 915 aa26.88■■□□□ 1.89
MSX2-201ENST00000239243 MAPKAPK5Q8IW41 473 aa26.88■■□□□ 1.89
MSX2-201ENST00000239243 FAM200AQ8TCP9 573 aa26.88■■□□□ 1.89
MSX2-201ENST00000239243 TAOK2Q9UL54 1235 aa26.88■■□□□ 1.89
MSX2-201ENST00000239243 KIF5BP33176 963 aa26.87■■□□□ 1.89
MSX2-201ENST00000239243 FUT2Q10981 343 aa26.87■■□□□ 1.89
MSX2-201ENST00000239243 ZNF444Q8N0Y2 327 aaPredicted RBP26.87■■□□□ 1.89
MSX2-201ENST00000239243 ANKS1AQ92625 1134 aa26.87■■□□□ 1.89
MSX2-201ENST00000239243 TCP11L1Q9NUJ3 509 aa26.87■■□□□ 1.89
MSX2-201ENST00000239243 MRVI1Q9Y6F6 885 aa26.87■■□□□ 1.89
MSX2-201ENST00000239243 DDX60LQ5H9U9 1706 aaKnown RBP26.87■■□□□ 1.89
MSX2-201ENST00000239243 MAP3K14Q99558 947 aa26.86■■□□□ 1.89
MSX2-201ENST00000239243 KAT14Q9H8E8 782 aa26.86■■□□□ 1.89
MSX2-201ENST00000239243 NMT2O60551 498 aa26.86■■□□□ 1.89
MSX2-201ENST00000239243 MSL1Q68DK7 614 aa26.86■■□□□ 1.89
MSX2-201ENST00000239243 RHBDL3P58872 404 aa26.85■■□□□ 1.89
MSX2-201ENST00000239243 RILPL1Q5EBL4 403 aa26.85■■□□□ 1.89
MSX2-201ENST00000239243 STYK1Q6J9G0 422 aa26.85■■□□□ 1.89
MSX2-201ENST00000239243 FMR1NBQ8N0W7 255 aaPredicted RBP26.85■■□□□ 1.89
MSX2-201ENST00000239243 QSER1Q2KHR3 1735 aa26.85■■□□□ 1.89
MSX2-201ENST00000239243 FLT1P17948 1338 aa26.85■■□□□ 1.89
MSX2-201ENST00000239243 BTBD18B2RXH4 712 aa26.85■■□□□ 1.89
MSX2-201ENST00000239243 H0YIN7 160 aa26.85■■□□□ 1.89
MSX2-201ENST00000239243 TSPY3P0CV98 308 aa26.85■■□□□ 1.89
MSX2-201ENST00000239243 TSPY8P0CW00 308 aa26.85■■□□□ 1.89
MSX2-201ENST00000239243 CMA1P23946 247 aa26.85■■□□□ 1.89
MSX2-201ENST00000239243 SLC4A8Q2Y0W8 1093 aa26.85■■□□□ 1.89
MSX2-201ENST00000239243 RCSD1Q6JBY9 416 aa26.85■■□□□ 1.89
MSX2-201ENST00000239243 ZNF622Q969S3 477 aaKnown RBP eCLIP26.85■■□□□ 1.89
MSX2-201ENST00000239243 DYNLL2Q96FJ2 89 aa26.85■■□□□ 1.89
MSX2-201ENST00000239243 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.85■■□□□ 1.89
MSX2-201ENST00000239243 KCNJ14Q9UNX9 436 aa26.85■■□□□ 1.89
MSX2-201ENST00000239243 G3V3G9 751 aa26.84■■□□□ 1.89
MSX2-201ENST00000239243 PLEKHA8P1O95397 391 aa26.84■■□□□ 1.89
MSX2-201ENST00000239243 DCAF8Q5TAQ9 597 aa26.84■■□□□ 1.89
MSX2-201ENST00000239243 C2CD5Q86YS7 1000 aa26.84■■□□□ 1.89
MSX2-201ENST00000239243 ESPNB1AK53 854 aa26.84■■□□□ 1.89
MSX2-201ENST00000239243 PTPAQ15257 358 aa26.84■■□□□ 1.89
MSX2-201ENST00000239243 SLC15A2Q16348 729 aa26.84■■□□□ 1.89
MSX2-201ENST00000239243 PLCD1P51178 756 aa26.83■■□□□ 1.89
MSX2-201ENST00000239243 PKN1Q16512 942 aa26.83■■□□□ 1.89
MSX2-201ENST00000239243 AXDND1Q5T1B0 1012 aaPredicted RBP26.83■■□□□ 1.89
MSX2-201ENST00000239243 SAP30BPQ9UHR5 308 aaKnown RBP26.83■■□□□ 1.89
MSX2-201ENST00000239243 V9GY48 417 aaPredicted RBP26.83■■□□□ 1.89
MSX2-201ENST00000239243 FOCADQ5VW36 1801 aa26.83■■□□□ 1.89
MSX2-201ENST00000239243 C16orf86Q6ZW13 317 aa26.82■■□□□ 1.88
MSX2-201ENST00000239243 FBXW7Q969H0 707 aa26.82■■□□□ 1.88
MSX2-201ENST00000239243 STK32BQ9NY57 414 aa26.82■■□□□ 1.88
MSX2-201ENST00000239243 DAGLAQ9Y4D2 1042 aa26.82■■□□□ 1.88
MSX2-201ENST00000239243 CNTNAP5Q8WYK1 1306 aa26.82■■□□□ 1.88
MSX2-201ENST00000239243 A0A1B0GVL5 298 aa26.82■■□□□ 1.88
MSX2-201ENST00000239243 BRMS1Q9HCU9 246 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms