RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 NBPF9Q3BBW0 867 aa21.79■■□□□ 1.08
SNX17-201ENST00000233575 ZNF444Q8N0Y2 327 aaPredicted RBP21.79■■□□□ 1.08
SNX17-201ENST00000233575 ZBED3Q96IU2 234 aaPredicted RBP21.79■■□□□ 1.08
SNX17-201ENST00000233575 WNT10BO00744 389 aa21.78■■□□□ 1.08
SNX17-201ENST00000233575 SYT1P21579 422 aa21.78■■□□□ 1.08
SNX17-201ENST00000233575 CDC27P30260 824 aa21.78■■□□□ 1.08
SNX17-201ENST00000233575 METAP2P50579 478 aaKnown RBP eCLIP21.78■■□□□ 1.08
SNX17-201ENST00000233575 MTMR14Q8NCE2 650 aa21.78■■□□□ 1.08
SNX17-201ENST00000233575 SMARCC2Q8TAQ2 1214 aa21.78■■□□□ 1.08
SNX17-201ENST00000233575 SERPINB13Q9UIV8 391 aa21.78■■□□□ 1.08
SNX17-201ENST00000233575 PTPDC1A2A3K4 754 aa21.77■■□□□ 1.08
SNX17-201ENST00000233575 FAM196BA6NMK8 535 aa21.77■■□□□ 1.08
SNX17-201ENST00000233575 TSPY3P0CV98 308 aa21.77■■□□□ 1.08
SNX17-201ENST00000233575 TSPY8P0CW00 308 aa21.77■■□□□ 1.08
SNX17-201ENST00000233575 ADD1P35611 737 aaKnown RBP21.77■■□□□ 1.08
SNX17-201ENST00000233575 SPDYE2Q495Y8 402 aa21.77■■□□□ 1.08
SNX17-201ENST00000233575 IFIT1BQ5T764 474 aaKnown RBP21.77■■□□□ 1.08
SNX17-201ENST00000233575 RCSD1Q6JBY9 416 aa21.77■■□□□ 1.08
SNX17-201ENST00000233575 ZSCAN29Q8IWY8 852 aaPredicted RBP21.77■■□□□ 1.08
SNX17-201ENST00000233575 MICALL2Q8IY33 904 aa21.77■■□□□ 1.08
SNX17-201ENST00000233575 DNAJC18Q9H819 358 aa21.77■■□□□ 1.08
SNX17-201ENST00000233575 FAM217BQ9NTX9 383 aaPredicted RBP21.77■■□□□ 1.08
SNX17-201ENST00000233575 MYH8P13535 1937 aa21.77■■□□□ 1.08
SNX17-201ENST00000233575 NPM3O75607 178 aaKnown RBP21.77■■□□□ 1.07
SNX17-201ENST00000233575 RPS12P25398 132 aaKnown RBP21.77■■□□□ 1.07
SNX17-201ENST00000233575 ZNF280AP59817 542 aaPredicted RBP21.77■■□□□ 1.07
SNX17-201ENST00000233575 RBM26Q5T8P6 1007 aaKnown RBP21.77■■□□□ 1.07
SNX17-201ENST00000233575 ZNF654Q8IZM8 581 aa21.77■■□□□ 1.07
SNX17-201ENST00000233575 BRD1O95696 1058 aa21.76■■□□□ 1.07
SNX17-201ENST00000233575 HLA-DOAP06340 250 aa21.76■■□□□ 1.07
SNX17-201ENST00000233575 NFKBIBQ15653 356 aa21.76■■□□□ 1.07
SNX17-201ENST00000233575 TMTC2Q8N394 836 aa21.76■■□□□ 1.07
SNX17-201ENST00000233575 LLPHQ9BRT6 129 aaKnown RBP21.76■■□□□ 1.07
SNX17-201ENST00000233575 VEZTQ9HBM0 779 aa21.76■■□□□ 1.07
SNX17-201ENST00000233575 ZNF287Q9HBT7 754 aa21.76■■□□□ 1.07
SNX17-201ENST00000233575 GOLGA8AA7E2F4 631 aa21.75■■□□□ 1.07
SNX17-201ENST00000233575 ENTPD3O75355 529 aa21.75■■□□□ 1.07
SNX17-201ENST00000233575 SHMT1P34896 483 aa21.75■■□□□ 1.07
SNX17-201ENST00000233575 SAMD7Q7Z3H4 446 aa21.75■■□□□ 1.07
SNX17-201ENST00000233575 DHX36Q9H2U1 1008 aaKnown RBP21.75■■□□□ 1.07
SNX17-201ENST00000233575 CNOT7Q9UIV1 285 aaKnown RBP21.75■■□□□ 1.07
SNX17-201ENST00000233575 SCAF8Q9UPN6 1271 aaKnown RBP21.75■■□□□ 1.07
SNX17-201ENST00000233575 CNTNAP1P78357 1384 aa21.75■■□□□ 1.07
SNX17-201ENST00000233575 NUP133Q8WUM0 1156 aa21.75■■□□□ 1.07
SNX17-201ENST00000233575 TMOD2Q9NZR1 351 aa21.75■■□□□ 1.07
SNX17-201ENST00000233575 STX6O43752 255 aa21.74■■□□□ 1.07
SNX17-201ENST00000233575 DPF2Q92785 391 aa21.74■■□□□ 1.07
SNX17-201ENST00000233575 CHAMP1Q96JM3 812 aa21.74■■□□□ 1.07
SNX17-201ENST00000233575 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.74■■□□□ 1.07
SNX17-201ENST00000233575 EHD4Q9H223 541 aa21.74■■□□□ 1.07
SNX17-201ENST00000233575 ATRNL1Q5VV63 1379 aa21.74■■□□□ 1.07
SNX17-201ENST00000233575 FDPSP14324 419 aaKnown RBP21.73■■□□□ 1.07
SNX17-201ENST00000233575 AKR1B1P15121 316 aa21.73■■□□□ 1.07
SNX17-201ENST00000233575 NBR1Q14596 966 aa21.73■■□□□ 1.07
SNX17-201ENST00000233575 SYNE3Q6ZMZ3 975 aa21.73■■□□□ 1.07
SNX17-201ENST00000233575 CDAN1Q8IWY9 1227 aa21.73■■□□□ 1.07
SNX17-201ENST00000233575 RNF181Q9P0P0 153 aa21.73■■□□□ 1.07
SNX17-201ENST00000233575 PI4KBQ9UBF8 816 aa21.73■■□□□ 1.07
SNX17-201ENST00000233575 CPLX1O14810 134 aa21.73■■□□□ 1.07
SNX17-201ENST00000233575 TBC1D10BQ4KMP7 808 aaPredicted RBP21.73■■□□□ 1.07
SNX17-201ENST00000233575 LARP1BQ659C4 914 aaKnown RBP21.73■■□□□ 1.07
SNX17-201ENST00000233575 NEDD1Q8NHV4 660 aa21.73■■□□□ 1.07
SNX17-201ENST00000233575 SWAP70Q9UH65 585 aa21.73■■□□□ 1.07
SNX17-201ENST00000233575 ASTN2O75129 1339 aaPredicted RBP21.73■■□□□ 1.07
SNX17-201ENST00000233575 NID2Q14112 1375 aa21.72■■□□□ 1.07
SNX17-201ENST00000233575 DHX16O60231 1041 aaKnown RBP21.72■■□□□ 1.07
SNX17-201ENST00000233575 TROAPQ12815 778 aa21.72■■□□□ 1.07
SNX17-201ENST00000233575 NTRK3Q16288 839 aa21.72■■□□□ 1.07
SNX17-201ENST00000233575 CRACR2BQ8N4Y2 399 aaPredicted RBP21.72■■□□□ 1.07
SNX17-201ENST00000233575 TCP11L1Q9NUJ3 509 aa21.72■■□□□ 1.07
SNX17-201ENST00000233575 MTMR6Q9Y217 621 aa21.72■■□□□ 1.07
SNX17-201ENST00000233575 NT5C2P49902 561 aa21.72■■□□□ 1.07
SNX17-201ENST00000233575 SHROOM1Q2M3G4 852 aaPredicted RBP21.72■■□□□ 1.07
SNX17-201ENST00000233575 CMTR1Q8N1G2 835 aaKnown RBP21.72■■□□□ 1.07
SNX17-201ENST00000233575 PHKBQ93100 1093 aa21.72■■□□□ 1.07
SNX17-201ENST00000233575 CSRNP1Q96S65 589 aa21.72■■□□□ 1.07
SNX17-201ENST00000233575 MYO1BO43795 1136 aa21.71■■□□□ 1.07
SNX17-201ENST00000233575 FOSBP53539 338 aa21.71■■□□□ 1.07
SNX17-201ENST00000233575 RTN1Q16799 776 aa21.71■■□□□ 1.07
SNX17-201ENST00000233575 CATIPQ7Z7H3 387 aa21.71■■□□□ 1.07
SNX17-201ENST00000233575 DGKHQ86XP1 1220 aa21.71■■□□□ 1.07
SNX17-201ENST00000233575 CLEC10AQ8IUN9 316 aa21.71■■□□□ 1.07
SNX17-201ENST00000233575 FANCBQ8NB91 859 aa21.71■■□□□ 1.07
SNX17-201ENST00000233575 CEP95Q96GE4 821 aa21.71■■□□□ 1.07
SNX17-201ENST00000233575 TMEM39BQ9GZU3 492 aa21.71■■□□□ 1.07
SNX17-201ENST00000233575 STX8Q9UNK0 236 aa21.71■■□□□ 1.07
SNX17-201ENST00000233575 WDR33Q9C0J8 1336 aaKnown RBP21.71■■□□□ 1.07
SNX17-201ENST00000233575 COL2A1P02458 1487 aaPredicted RBP21.7■■□□□ 1.07
SNX17-201ENST00000233575 VPS37CA5D8V6 355 aaPredicted RBP21.7■■□□□ 1.06
SNX17-201ENST00000233575 HMGN5P82970 282 aaKnown RBP21.7■■□□□ 1.06
SNX17-201ENST00000233575 GPC2Q8N158 579 aa21.7■■□□□ 1.06
SNX17-201ENST00000233575 FAM184AQ8NB25 1140 aa21.7■■□□□ 1.06
SNX17-201ENST00000233575 FAM151AQ8WW52 585 aa21.7■■□□□ 1.06
SNX17-201ENST00000233575 UBE2Q2LH0YL09 131 aa21.7■■□□□ 1.06
SNX17-201ENST00000233575 C9orf131Q5VYM1 1079 aa21.7■■□□□ 1.06
SNX17-201ENST00000233575 CDC37L1Q7L3B6 337 aa21.7■■□□□ 1.06
SNX17-201ENST00000233575 ANKS1AQ92625 1134 aa21.7■■□□□ 1.06
SNX17-201ENST00000233575 ZSCAN22P10073 491 aaPredicted RBP21.69■■□□□ 1.06
SNX17-201ENST00000233575 KIF4BQ2VIQ3 1234 aa21.69■■□□□ 1.06
SNX17-201ENST00000233575 CHMP4CQ96CF2 233 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms