RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 MYL10Q9BUA6 226 aa12.85□□□□□ -0.35
LAMA4-201ENST00000230538 NOD1Q9Y239 953 aa12.85□□□□□ -0.35
LAMA4-201ENST00000230538 KRT25Q7Z3Z0 450 aa12.85□□□□□ -0.35
LAMA4-201ENST00000230538 TRIM31Q9BZY9 425 aa12.85□□□□□ -0.35
LAMA4-201ENST00000230538 C19orf44Q9H6X5 657 aa12.85□□□□□ -0.35
LAMA4-201ENST00000230538 TBC1D7Q9P0N9 293 aa12.85□□□□□ -0.35
LAMA4-201ENST00000230538 SH3TC1Q8TE82 1336 aa12.85□□□□□ -0.35
LAMA4-201ENST00000230538 NEDD9Q14511 834 aa12.85□□□□□ -0.35
LAMA4-201ENST00000230538 NONOQ15233 471 aaKnown RBP eCLIP12.85□□□□□ -0.35
LAMA4-201ENST00000230538 TRIM6Q9C030 488 aaPredicted RBP12.85□□□□□ -0.35
LAMA4-201ENST00000230538 PRDM1O75626 825 aa12.85□□□□□ -0.35
LAMA4-201ENST00000230538 ZNF202O95125 648 aa12.85□□□□□ -0.35
LAMA4-201ENST00000230538 CALCRLQ16602 461 aa12.85□□□□□ -0.35
LAMA4-201ENST00000230538 GKAP1Q5VSY0 366 aaPredicted RBP12.85□□□□□ -0.35
LAMA4-201ENST00000230538 MYCT1Q8N699 235 aa12.85□□□□□ -0.35
LAMA4-201ENST00000230538 BTG4Q9NY30 223 aa12.85□□□□□ -0.35
LAMA4-201ENST00000230538 CTTNBP2NLQ9P2B4 639 aa12.85□□□□□ -0.35
LAMA4-201ENST00000230538 LRWD1Q9UFC0 647 aa12.85□□□□□ -0.35
LAMA4-201ENST00000230538 DNM3Q9UQ16 869 aa12.85□□□□□ -0.35
LAMA4-201ENST00000230538 USP19O94966 1318 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 GIGYF1O75420 1035 aaPredicted RBP12.84□□□□□ -0.35
LAMA4-201ENST00000230538 PPARDQ03181 441 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 DYMQ7RTS9 669 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 TBC1D31Q96DN5 1066 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 UIMC1Q96RL1 719 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 IMPACTQ9P2X3 320 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 USTQ9Y2C2 406 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 ELF2Q15723 593 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 CERS3Q8IU89 383 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 GABPB2Q8TAK5 448 aaPredicted RBP12.84□□□□□ -0.35
LAMA4-201ENST00000230538 CARD6Q9BX69 1037 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 TAB2Q9NYJ8 693 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 GOLGA6CA6NDK9 693 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 GOLGA6DP0CG33 693 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 WDR66Q8TBY9 1149 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 PHKBQ93100 1093 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 GOLGA6AQ9NYA3 693 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 ASIC3Q9UHC3 531 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 MAST1Q9Y2H9 1570 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 GCNT3O95395 438 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 POSTNQ15063 836 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 USH1GQ495M9 461 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 BRDTQ58F21 947 aaPredicted RBP12.84□□□□□ -0.35
LAMA4-201ENST00000230538 NELFBQ8WX92 580 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 SUCLG2Q96I99 432 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 GPHNQ9NQX3 736 aaPredicted RBP12.84□□□□□ -0.35
LAMA4-201ENST00000230538 MAP3K19Q56UN5 1328 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 HERC4Q5GLZ8 1057 aaPredicted RBP12.84□□□□□ -0.35
LAMA4-201ENST00000230538 TAOK1Q7L7X3 1001 aa12.84□□□□□ -0.35
LAMA4-201ENST00000230538 GBP6Q6ZN66 633 aa12.83□□□□□ -0.35
LAMA4-201ENST00000230538 AFAP1L2Q8N4X5 818 aa12.83□□□□□ -0.35
LAMA4-201ENST00000230538 CCNL1Q9UK58 526 aaPredicted RBP12.83□□□□□ -0.35
LAMA4-201ENST00000230538 PNMA6EA0A0J9YXQ4 647 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 CEP104O60308 925 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 TAF5LO75529 589 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 IL13P35225 146 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 TMTC1Q8IUR5 882 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 NDUFAB1O14561 156 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 MRPL44Q9H9J2 332 aaKnown RBP12.83□□□□□ -0.36
LAMA4-201ENST00000230538 KIAA0556O60303 1618 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 ERCC3P19447 782 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 CABP7Q86V35 215 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 KLHL7Q8IXQ5 586 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 LZTS2Q9BRK4 669 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 RABEP2Q9H5N1 569 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 TRIM35Q9UPQ4 493 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 ARHGEF12Q9NZN5 1544 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 ARID4AP29374 1257 aaPredicted RBP12.83□□□□□ -0.36
LAMA4-201ENST00000230538 SLC1A4P43007 532 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 GABPAQ06546 454 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 SEPT6Q14141 434 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 PPP2R5DQ14738 602 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 DCUN1D2Q6PH85 259 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 CACNA2D3Q8IZS8 1091 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 SYCE1Q8N0S2 351 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 BABAM1Q9NWV8 329 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 GINS2Q9Y248 185 aa12.83□□□□□ -0.36
LAMA4-201ENST00000230538 ZBED4O75132 1171 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 BCRP11274 1271 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 GBP1P32455 592 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 ZNF131P52739 623 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 LPIN2Q92539 896 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 EPSTI1Q96J88 318 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 EXOC3O60645 756 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 NELFCDQ8IXH7 590 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 SPATA5Q8NB90 893 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 SGSM2O43147 1006 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 JAK2O60674 1132 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 NAA25Q14CX7 972 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 BLZF1Q9H2G9 400 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 AZI2Q9H6S1 392 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 IBTKQ9P2D0 1353 aaPredicted RBP12.82□□□□□ -0.36
LAMA4-201ENST00000230538 GIPC1O14908 333 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 KLHL30Q0D2K2 578 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 PNOCQ13519 176 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 SFMBT2Q5VUG0 894 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 SDCCAG8Q86SQ7 713 aaPredicted RBP12.82□□□□□ -0.36
LAMA4-201ENST00000230538 DNAJC5BQ9UF47 199 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 KCNJ14Q9UNX9 436 aa12.82□□□□□ -0.36
LAMA4-201ENST00000230538 MAGEA1P43355 309 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms