RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 GOLGA6DP0CG33 693 aa16.09■□□□□ 0.17
SHPK-201ENST00000225519 RABL6Q3YEC7 729 aaPredicted RBP16.09■□□□□ 0.17
SHPK-201ENST00000225519 CYP26C1Q6V0L0 522 aa16.09■□□□□ 0.17
SHPK-201ENST00000225519 TRIM22Q8IYM9 498 aa16.09■□□□□ 0.17
SHPK-201ENST00000225519 GOLGA6AQ9NYA3 693 aa16.09■□□□□ 0.17
SHPK-201ENST00000225519 ABL1P00519 1130 aa16.08■□□□□ 0.17
SHPK-201ENST00000225519 FXR1P51114 621 aaKnown RBP eCLIP16.08■□□□□ 0.17
SHPK-201ENST00000225519 APOA5Q6Q788 366 aa16.08■□□□□ 0.17
SHPK-201ENST00000225519 MSL3Q8N5Y2 521 aaKnown RBP16.08■□□□□ 0.17
SHPK-201ENST00000225519 ZNF496Q96IT1 587 aaPredicted RBP16.08■□□□□ 0.17
SHPK-201ENST00000225519 SLC12A7Q9Y666 1083 aa16.08■□□□□ 0.17
SHPK-201ENST00000225519 KRT9P35527 623 aa16.08■□□□□ 0.16
SHPK-201ENST00000225519 KCNH5Q8NCM2 988 aa16.08■□□□□ 0.16
SHPK-201ENST00000225519 PUS7LQ9H0K6 701 aaKnown RBP16.08■□□□□ 0.16
SHPK-201ENST00000225519 DENND2AQ9ULE3 1009 aa16.08■□□□□ 0.16
SHPK-201ENST00000225519 EYA2O00167 538 aa16.08■□□□□ 0.16
SHPK-201ENST00000225519 KIAA1328Q86T90 577 aa16.08■□□□□ 0.16
SHPK-201ENST00000225519 FBXL16Q8N461 479 aa16.08■□□□□ 0.16
SHPK-201ENST00000225519 APPBP2Q92624 585 aa16.08■□□□□ 0.16
SHPK-201ENST00000225519 RUFY1Q96T51 708 aa16.08■□□□□ 0.16
SHPK-201ENST00000225519 UBE2Q2LH0YL09 131 aa16.07■□□□□ 0.16
SHPK-201ENST00000225519 CASP1P29466 404 aa16.07■□□□□ 0.16
SHPK-201ENST00000225519 RRP12Q5JTH9 1297 aaKnown RBP16.07■□□□□ 0.16
SHPK-201ENST00000225519 GSPT2Q8IYD1 628 aaKnown RBP16.07■□□□□ 0.16
SHPK-201ENST00000225519 RAPGEF4Q8WZA2 1011 aa16.07■□□□□ 0.16
SHPK-201ENST00000225519 WASF1Q92558 559 aa16.07■□□□□ 0.16
SHPK-201ENST00000225519 CCDC51Q96ER9 411 aa16.07■□□□□ 0.16
SHPK-201ENST00000225519 FAM237AA0A1B0GTK4 181 aa16.07■□□□□ 0.16
SHPK-201ENST00000225519 IPO7O95373 1038 aaKnown RBP16.07■□□□□ 0.16
SHPK-201ENST00000225519 CDC25AP30304 524 aa16.07■□□□□ 0.16
SHPK-201ENST00000225519 GGCXP38435 758 aa16.07■□□□□ 0.16
SHPK-201ENST00000225519 ATG9AQ7Z3C6 839 aa16.07■□□□□ 0.16
SHPK-201ENST00000225519 BCAS4Q8TDM0 211 aa16.07■□□□□ 0.16
SHPK-201ENST00000225519 HDAC6Q9UBN7 1215 aa16.07■□□□□ 0.16
SHPK-201ENST00000225519 IFIT3O14879 490 aaKnown RBP16.07■□□□□ 0.16
SHPK-201ENST00000225519 MDM2Q00987 491 aaPredicted RBP16.07■□□□□ 0.16
SHPK-201ENST00000225519 CEP131Q9UPN4 1083 aa16.07■□□□□ 0.16
SHPK-201ENST00000225519 CTNND2Q9UQB3 1225 aa16.07■□□□□ 0.16
SHPK-201ENST00000225519 STAMQ92783 540 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 ADD3Q9UEY8 706 aaKnown RBP16.06■□□□□ 0.16
SHPK-201ENST00000225519 GOLGA6BA6NDN3 693 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 NUTM2BA6NNL0 878 aaPredicted RBP16.06■□□□□ 0.16
SHPK-201ENST00000225519 NUTM2EB1AL46 878 aaPredicted RBP16.06■□□□□ 0.16
SHPK-201ENST00000225519 KIAA0754O94854 1291 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 INPP5BP32019 993 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 USP49Q70CQ1 688 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 PUS3Q9BZE2 481 aaKnown RBP16.06■□□□□ 0.16
SHPK-201ENST00000225519 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.06■□□□□ 0.16
SHPK-201ENST00000225519 TAB2Q9NYJ8 693 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 MYO1AQ9UBC5 1043 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 HPCAL4Q9UM19 191 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 SAR1BQ9Y6B6 198 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 FAM169AQ9Y6X4 670 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 SRGAP2O75044 1071 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 GYPCP04921 128 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 SNRPA1P09661 255 aaKnown RBP16.06■□□□□ 0.16
SHPK-201ENST00000225519 PTPREP23469 700 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 ZAP70P43403 619 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 USP14P54578 494 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 RILPL1Q5EBL4 403 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 CCDC122Q5T0U0 273 aa16.06■□□□□ 0.16
SHPK-201ENST00000225519 IDH1O75874 414 aaKnown RBP16.05■□□□□ 0.16
SHPK-201ENST00000225519 TTC19Q6DKK2 380 aaPredicted RBP16.05■□□□□ 0.16
SHPK-201ENST00000225519 WDR93Q6P2C0 686 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 CYB5R4Q7L1T6 521 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 VIPAS39Q9H9C1 493 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 SENP2Q9HC62 589 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 TRIM10Q9UDY6 481 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 ZNF330Q9Y3S2 320 aaPredicted RBP16.05■□□□□ 0.16
SHPK-201ENST00000225519 SYF2O95926 243 aaKnown RBP16.05■□□□□ 0.16
SHPK-201ENST00000225519 ADORA1P30542 326 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 COG1Q8WTW3 980 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 CSRNP2Q9H175 543 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 PCDHB6Q9Y5E3 794 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 LAMA4Q16363 1823 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 CKAP4Q07065 602 aaKnown RBP16.05■□□□□ 0.16
SHPK-201ENST00000225519 CCDC57Q2TAC2 916 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 ESCO1Q5FWF5 840 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 RRAGBQ5VZM2 374 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 NUP133Q8WUM0 1156 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 MED15Q96RN5 788 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 KAT14Q9H8E8 782 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 CABP5Q9NP86 173 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 JADE2Q9NQC1 790 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 PIK3C2AO00443 1686 aa16.05■□□□□ 0.16
SHPK-201ENST00000225519 TOPAZ1Q8N9V7 1692 aa16.04■□□□□ 0.16
SHPK-201ENST00000225519 SH2B2O14492 632 aaPredicted RBP16.04■□□□□ 0.16
SHPK-201ENST00000225519 MAP2K2P36507 400 aa16.04■□□□□ 0.16
SHPK-201ENST00000225519 PI16Q6UXB8 463 aa16.04■□□□□ 0.16
SHPK-201ENST00000225519 GPR108Q9NPR9 543 aa16.04■□□□□ 0.16
SHPK-201ENST00000225519 CWC25Q9NXE8 425 aaPredicted RBP16.04■□□□□ 0.16
SHPK-201ENST00000225519 FBXO2Q9UK22 296 aaPredicted RBP16.04■□□□□ 0.16
SHPK-201ENST00000225519 EPN1Q9Y6I3 576 aaPredicted RBP16.04■□□□□ 0.16
SHPK-201ENST00000225519 UBN2Q6ZU65 1347 aa16.04■□□□□ 0.16
SHPK-201ENST00000225519 ERVK-24P63145 666 aa16.04■□□□□ 0.16
SHPK-201ENST00000225519 GNGT1P63211 74 aa16.04■□□□□ 0.16
SHPK-201ENST00000225519 FBXW10Q5XX13 1052 aa16.04■□□□□ 0.16
SHPK-201ENST00000225519 XAGE2Q96GT9 111 aa16.04■□□□□ 0.16
SHPK-201ENST00000225519 CAPS2Q9BXY5 557 aa16.04■□□□□ 0.16
SHPK-201ENST00000225519 ABHD10Q9NUJ1 306 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms