RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 BMP2KLQ5H9B9 411 aa16.37■□□□□ 0.21
UPK1A-201ENST00000222275 ZCCHC17Q9NP64 241 aaKnown RBP16.37■□□□□ 0.21
UPK1A-201ENST00000222275 PICK1Q9NRD5 415 aa16.37■□□□□ 0.21
UPK1A-201ENST00000222275 FLT1P17948 1338 aa16.37■□□□□ 0.21
UPK1A-201ENST00000222275 TCRBV5S4A2TA0A5A2 114 aa16.36■□□□□ 0.21
UPK1A-201ENST00000222275 TRIM75PA6NK02 468 aa16.36■□□□□ 0.21
UPK1A-201ENST00000222275 CAP2P40123 477 aa16.36■□□□□ 0.21
UPK1A-201ENST00000222275 RIOK1Q9BRS2 568 aaKnown RBP16.36■□□□□ 0.21
UPK1A-201ENST00000222275 HELLSQ9NRZ9 838 aa16.36■□□□□ 0.21
UPK1A-201ENST00000222275 PI4KBQ9UBF8 816 aa16.36■□□□□ 0.21
UPK1A-201ENST00000222275 ZSWIM8A7E2V4 1837 aa16.35■□□□□ 0.21
UPK1A-201ENST00000222275 POTEFA5A3E0 1075 aa16.35■□□□□ 0.21
UPK1A-201ENST00000222275 GSPT1P15170 499 aaKnown RBP16.35■□□□□ 0.21
UPK1A-201ENST00000222275 GNAT2P19087 354 aa16.35■□□□□ 0.21
UPK1A-201ENST00000222275 SDSP20132 328 aa16.35■□□□□ 0.21
UPK1A-201ENST00000222275 MFAP1P55081 439 aaKnown RBP16.35■□□□□ 0.21
UPK1A-201ENST00000222275 LACTBP83111 547 aaPredicted RBP16.35■□□□□ 0.21
UPK1A-201ENST00000222275 SPP2Q13103 211 aa16.35■□□□□ 0.21
UPK1A-201ENST00000222275 TREML2Q5T2D2 321 aa16.35■□□□□ 0.21
UPK1A-201ENST00000222275 CRNKL1Q9BZJ0 848 aaKnown RBP16.35■□□□□ 0.21
UPK1A-201ENST00000222275 DIAPH3Q9NSV4 1193 aa16.35■□□□□ 0.21
UPK1A-201ENST00000222275 PTCH2Q9Y6C5 1203 aa16.35■□□□□ 0.21
UPK1A-201ENST00000222275 SIPA1L1O43166 1804 aa16.35■□□□□ 0.21
UPK1A-201ENST00000222275 BCRP11274 1271 aa16.34■□□□□ 0.21
UPK1A-201ENST00000222275 ZMYM1Q5SVZ6 1142 aa16.34■□□□□ 0.21
UPK1A-201ENST00000222275 RUFY2Q8WXA3 655 aa16.34■□□□□ 0.21
UPK1A-201ENST00000222275 DDRGK1Q96HY6 314 aa16.34■□□□□ 0.21
UPK1A-201ENST00000222275 TRIM47Q96LD4 638 aa16.34■□□□□ 0.21
UPK1A-201ENST00000222275 COL2A1P02458 1487 aaPredicted RBP16.34■□□□□ 0.21
UPK1A-201ENST00000222275 PHIPQ8WWQ0 1821 aa16.33■□□□□ 0.21
UPK1A-201ENST00000222275 SMIM22K7EJ46 135 aa16.33■□□□□ 0.2
UPK1A-201ENST00000222275 MCMDC2Q4G0Z9 681 aa16.33■□□□□ 0.2
UPK1A-201ENST00000222275 CASC1Q6TDU7 716 aa16.33■□□□□ 0.2
UPK1A-201ENST00000222275 GADL1Q6ZQY3 521 aa16.33■□□□□ 0.2
UPK1A-201ENST00000222275 FOXP4Q8IVH2 680 aaPredicted RBP16.33■□□□□ 0.2
UPK1A-201ENST00000222275 MBD4O95243 580 aa16.32■□□□□ 0.2
UPK1A-201ENST00000222275 USP5P45974 858 aa16.32■□□□□ 0.2
UPK1A-201ENST00000222275 PLCD1P51178 756 aa16.32■□□□□ 0.2
UPK1A-201ENST00000222275 ARMC5Q96C12 935 aa16.32■□□□□ 0.2
UPK1A-201ENST00000222275 DHX36Q9H2U1 1008 aaKnown RBP16.32■□□□□ 0.2
UPK1A-201ENST00000222275 ATP8A2Q9NTI2 1148 aa16.32■□□□□ 0.2
UPK1A-201ENST00000222275 CDK5RAP2Q96SN8 1893 aa16.31■□□□□ 0.2
UPK1A-201ENST00000222275 PEX10O60683 326 aa16.31■□□□□ 0.2
UPK1A-201ENST00000222275 GDF11O95390 407 aa16.31■□□□□ 0.2
UPK1A-201ENST00000222275 PSMC4P43686 418 aa16.31■□□□□ 0.2
UPK1A-201ENST00000222275 POTEEQ6S8J3 1075 aa16.31■□□□□ 0.2
UPK1A-201ENST00000222275 FASTKD5Q7L8L6 764 aaKnown RBP16.31■□□□□ 0.2
UPK1A-201ENST00000222275 ZNF280CQ8ND82 737 aa16.31■□□□□ 0.2
UPK1A-201ENST00000222275 OSBP2Q969R2 916 aa16.31■□□□□ 0.2
UPK1A-201ENST00000222275 PUS7LQ9H0K6 701 aaKnown RBP16.31■□□□□ 0.2
UPK1A-201ENST00000222275 HERC5Q9UII4 1024 aaKnown RBP16.31■□□□□ 0.2
UPK1A-201ENST00000222275 RAD50Q92878 1312 aa16.3■□□□□ 0.2
UPK1A-201ENST00000222275 USP17L5A8MUK1 530 aa16.3■□□□□ 0.2
UPK1A-201ENST00000222275 PRKAB2O43741 272 aa16.3■□□□□ 0.2
UPK1A-201ENST00000222275 CYP2D6P10635 497 aa16.3■□□□□ 0.2
UPK1A-201ENST00000222275 HMGCS2P54868 508 aa16.3■□□□□ 0.2
UPK1A-201ENST00000222275 GIMAP6Q6P9H5 292 aa16.3■□□□□ 0.2
UPK1A-201ENST00000222275 AMOTL1Q8IY63 956 aa16.3■□□□□ 0.2
UPK1A-201ENST00000222275 LCORLQ8N3X6 602 aa16.3■□□□□ 0.2
UPK1A-201ENST00000222275 SH3TC2Q8TF17 1288 aa16.3■□□□□ 0.2
UPK1A-201ENST00000222275 STRBPQ96SI9 672 aaKnown RBP16.3■□□□□ 0.2
UPK1A-201ENST00000222275 NACAP1Q9BZK3 213 aa16.3■□□□□ 0.2
UPK1A-201ENST00000222275 ARMT1Q9H993 441 aa16.3■□□□□ 0.2
UPK1A-201ENST00000222275 TAOK2Q9UL54 1235 aa16.3■□□□□ 0.2
UPK1A-201ENST00000222275 GPAA1O43292 621 aa16.29■□□□□ 0.2
UPK1A-201ENST00000222275 MYCP01106 439 aaPredicted RBP16.29■□□□□ 0.2
UPK1A-201ENST00000222275 EN2P19622 333 aaPredicted RBP16.29■□□□□ 0.2
UPK1A-201ENST00000222275 OSBPP22059 807 aa16.29■□□□□ 0.2
UPK1A-201ENST00000222275 NMIQ13287 307 aaPredicted RBP16.29■□□□□ 0.2
UPK1A-201ENST00000222275 SH3D19Q5HYK7 790 aa16.29■□□□□ 0.2
UPK1A-201ENST00000222275 ZNF333Q96JL9 665 aa16.29■□□□□ 0.2
UPK1A-201ENST00000222275 WDR18Q9BV38 432 aa16.29■□□□□ 0.2
UPK1A-201ENST00000222275 GABRQQ9UN88 632 aa16.29■□□□□ 0.2
UPK1A-201ENST00000222275 AGTPBP1Q9UPW5 1226 aa16.29■□□□□ 0.2
UPK1A-201ENST00000222275 SLC4A4Q9Y6R1 1079 aa16.29■□□□□ 0.2
UPK1A-201ENST00000222275 PTPRFP10586 1907 aa16.29■□□□□ 0.2
UPK1A-201ENST00000222275 DOCK3Q8IZD9 2030 aa16.28■□□□□ 0.2
UPK1A-201ENST00000222275 PATL2C9JE40 543 aaKnown RBP16.28■□□□□ 0.2
UPK1A-201ENST00000222275 HLA-DOAP06340 250 aa16.28■□□□□ 0.2
UPK1A-201ENST00000222275 CHMLP26374 656 aa16.28■□□□□ 0.2
UPK1A-201ENST00000222275 TATDN1Q6P1N9 297 aa16.28■□□□□ 0.2
UPK1A-201ENST00000222275 CWC27Q6UX04 472 aaKnown RBP16.28■□□□□ 0.2
UPK1A-201ENST00000222275 TTC6Q86TZ1 520 aa16.28■□□□□ 0.2
UPK1A-201ENST00000222275 SDR42E1Q8WUS8 393 aa16.28■□□□□ 0.2
UPK1A-201ENST00000222275 PARK7Q99497 189 aaKnown RBP16.28■□□□□ 0.2
UPK1A-201ENST00000222275 SLC45A1Q9Y2W3 748 aa16.28■□□□□ 0.2
UPK1A-201ENST00000222275 DOCK1Q14185 1865 aa16.28■□□□□ 0.2
UPK1A-201ENST00000222275 EIF5BO60841 1220 aaKnown RBP16.27■□□□□ 0.2
UPK1A-201ENST00000222275 CDC45O75419 566 aa16.27■□□□□ 0.2
UPK1A-201ENST00000222275 GH2P01242 217 aa16.27■□□□□ 0.2
UPK1A-201ENST00000222275 APPP05067 770 aa16.27■□□□□ 0.2
UPK1A-201ENST00000222275 GUCY1A2P33402 732 aa16.27■□□□□ 0.2
UPK1A-201ENST00000222275 SHMT1P34896 483 aa16.27■□□□□ 0.2
UPK1A-201ENST00000222275 GABPAQ06546 454 aa16.27■□□□□ 0.2
UPK1A-201ENST00000222275 SKAP1Q86WV1 359 aa16.27■□□□□ 0.2
UPK1A-201ENST00000222275 FAM227BQ96M60 508 aa16.27■□□□□ 0.2
UPK1A-201ENST00000222275 EMILIN3Q9NT22 766 aa16.27■□□□□ 0.2
UPK1A-201ENST00000222275 SRRDQ9UH36 339 aa16.27■□□□□ 0.2
UPK1A-201ENST00000222275 ZBTB21Q9ULJ3 1066 aa16.27■□□□□ 0.2
UPK1A-201ENST00000222275 FOCADQ5VW36 1801 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms