RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 HNRNPLLQ8WVV9 542 aaKnown RBP18.21■□□□□ 0.5
SF3A2-201ENST00000221494 M0R2C6 588 aa18.2■□□□□ 0.5
SF3A2-201ENST00000221494 TUBBP07437 444 aa18.2■□□□□ 0.5
SF3A2-201ENST00000221494 SMC1AQ14683 1233 aaKnown RBP18.2■□□□□ 0.5
SF3A2-201ENST00000221494 MLKLQ8NB16 471 aa18.2■□□□□ 0.5
SF3A2-201ENST00000221494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.19■□□□□ 0.5
SF3A2-201ENST00000221494 KIF28PB7ZC32 967 aa18.19■□□□□ 0.5
SF3A2-201ENST00000221494 GORABQ5T7V8 394 aa18.19■□□□□ 0.5
SF3A2-201ENST00000221494 SPECC1LQ69YQ0 1117 aa18.19■□□□□ 0.5
SF3A2-201ENST00000221494 KRBA2Q6ZNG9 492 aa18.19■□□□□ 0.5
SF3A2-201ENST00000221494 IQUBQ8NA54 791 aa18.19■□□□□ 0.5
SF3A2-201ENST00000221494 APPBP2Q92624 585 aa18.19■□□□□ 0.5
SF3A2-201ENST00000221494 DPF2Q92785 391 aa18.19■□□□□ 0.5
SF3A2-201ENST00000221494 NAA15Q9BXJ9 866 aaKnown RBP18.19■□□□□ 0.5
SF3A2-201ENST00000221494 STK36Q9NRP7 1315 aa18.19■□□□□ 0.5
SF3A2-201ENST00000221494 PDE8BO95263 885 aa18.19■□□□□ 0.5
SF3A2-201ENST00000221494 OAS2P29728 719 aaKnown RBP18.19■□□□□ 0.5
SF3A2-201ENST00000221494 ZNF827Q17R98 1081 aa18.19■□□□□ 0.5
SF3A2-201ENST00000221494 NT5DC1Q5TFE4 455 aa18.19■□□□□ 0.5
SF3A2-201ENST00000221494 SHC4Q6S5L8 630 aa18.19■□□□□ 0.5
SF3A2-201ENST00000221494 ENOX1Q8TC92 643 aaKnown RBP18.19■□□□□ 0.5
SF3A2-201ENST00000221494 KIFC2Q96AC6 838 aa18.19■□□□□ 0.5
SF3A2-201ENST00000221494 AKT1S1Q96B36 256 aa18.19■□□□□ 0.5
SF3A2-201ENST00000221494 XAGE2Q96GT9 111 aa18.19■□□□□ 0.5
SF3A2-201ENST00000221494 MAP3K14Q99558 947 aa18.19■□□□□ 0.5
SF3A2-201ENST00000221494 FANCGO15287 622 aa18.18■□□□□ 0.5
SF3A2-201ENST00000221494 ZNF18P17022 549 aa18.18■□□□□ 0.5
SF3A2-201ENST00000221494 ADORA1P30542 326 aa18.18■□□□□ 0.5
SF3A2-201ENST00000221494 TXLNAP40222 546 aa18.18■□□□□ 0.5
SF3A2-201ENST00000221494 CNPY4Q8N129 248 aa18.18■□□□□ 0.5
SF3A2-201ENST00000221494 OSBP2Q969R2 916 aa18.18■□□□□ 0.5
SF3A2-201ENST00000221494 PANX2Q96RD6 677 aa18.18■□□□□ 0.5
SF3A2-201ENST00000221494 LRP5O75197 1615 aa18.18■□□□□ 0.5
SF3A2-201ENST00000221494 MROH5Q6ZUA9 1318 aa18.18■□□□□ 0.5
SF3A2-201ENST00000221494 GNG11P61952 73 aa18.17■□□□□ 0.5
SF3A2-201ENST00000221494 VPS37DQ86XT2 251 aa18.17■□□□□ 0.5
SF3A2-201ENST00000221494 FUT8Q9BYC5 575 aa18.17■□□□□ 0.5
SF3A2-201ENST00000221494 MYH3P11055 1940 aa18.17■□□□□ 0.5
SF3A2-201ENST00000221494 MAP2K7O14733 419 aa18.17■□□□□ 0.5
SF3A2-201ENST00000221494 TM4SF1P30408 202 aa18.17■□□□□ 0.5
SF3A2-201ENST00000221494 IGHMBP2P38935 993 aaKnown RBP18.17■□□□□ 0.5
SF3A2-201ENST00000221494 ANTXR2P58335 489 aa18.17■□□□□ 0.5
SF3A2-201ENST00000221494 OTUD7BQ6GQQ9 843 aa18.17■□□□□ 0.5
SF3A2-201ENST00000221494 KANK3Q6NY19 840 aa18.17■□□□□ 0.5
SF3A2-201ENST00000221494 CCDC24Q8N4L8 307 aa18.17■□□□□ 0.5
SF3A2-201ENST00000221494 GOLGA5Q8TBA6 731 aa18.17■□□□□ 0.5
SF3A2-201ENST00000221494 NLRP3Q96P20 1036 aa18.17■□□□□ 0.5
SF3A2-201ENST00000221494 ALG1Q9BT22 464 aa18.17■□□□□ 0.5
SF3A2-201ENST00000221494 ANGEL1Q9UNK9 670 aaKnown RBP18.17■□□□□ 0.5
SF3A2-201ENST00000221494 UBR3Q6ZT12 1888 aa18.16■□□□□ 0.5
SF3A2-201ENST00000221494 COL24A1Q17RW2 1714 aa18.16■□□□□ 0.5
SF3A2-201ENST00000221494 FOXP2O15409 715 aa18.16■□□□□ 0.5
SF3A2-201ENST00000221494 USP5P45974 858 aa18.16■□□□□ 0.5
SF3A2-201ENST00000221494 TTLL5Q6EMB2 1281 aa18.16■□□□□ 0.5
SF3A2-201ENST00000221494 CHST3Q7LGC8 479 aa18.16■□□□□ 0.5
SF3A2-201ENST00000221494 METTL16Q86W50 562 aaKnown RBP18.16■□□□□ 0.5
SF3A2-201ENST00000221494 CEP112Q8N8E3 955 aa18.16■□□□□ 0.5
SF3A2-201ENST00000221494 TC2NQ8N9U0 490 aa18.16■□□□□ 0.5
SF3A2-201ENST00000221494 CDC5LQ99459 802 aaKnown RBP18.16■□□□□ 0.5
SF3A2-201ENST00000221494 INTS13Q9NVM9 706 aa18.16■□□□□ 0.5
SF3A2-201ENST00000221494 FANCLQ9NW38 375 aa18.16■□□□□ 0.5
SF3A2-201ENST00000221494 TFCP2L1Q9NZI6 479 aa18.16■□□□□ 0.5
SF3A2-201ENST00000221494 NID2Q14112 1375 aa18.16■□□□□ 0.5
SF3A2-201ENST00000221494 A0A0G2JLW4 131 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 ZNF213O14771 459 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 FGAP02671 866 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 FGFR2P21802 821 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 RAD51AP2Q09MP3 1159 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 TRDNQ13061 729 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 CNNM3Q8NE01 707 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 HELBQ8NG08 1087 aaPredicted RBP18.15■□□□□ 0.5
SF3A2-201ENST00000221494 TMEM87BQ96K49 555 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 PARD6BQ9BYG5 372 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 KCNH3Q9ULD8 1083 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 SASH3O75995 380 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 CCDC175P0C221 793 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 CAPN2P17655 700 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 ERCC5P28715 1186 aaPredicted RBP18.15■□□□□ 0.5
SF3A2-201ENST00000221494 MDM2Q00987 491 aaPredicted RBP18.15■□□□□ 0.5
SF3A2-201ENST00000221494 PNOCQ13519 176 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 TRIM29Q14134 588 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 KRT40Q6A162 431 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 ZNF579Q8NAF0 562 aaKnown RBP18.15■□□□□ 0.5
SF3A2-201ENST00000221494 WASF1Q92558 559 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 LAMB2P55268 1798 aa18.15■□□□□ 0.5
SF3A2-201ENST00000221494 SRGAP1Q7Z6B7 1085 aa18.14■□□□□ 0.49
SF3A2-201ENST00000221494 KRI1Q8N9T8 703 aaKnown RBP18.14■□□□□ 0.49
SF3A2-201ENST00000221494 RAB21Q9UL25 225 aa18.14■□□□□ 0.49
SF3A2-201ENST00000221494 PCDHA5Q9Y5H7 936 aa18.14■□□□□ 0.49
SF3A2-201ENST00000221494 TMEM232C9JQI7 657 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 POLR3GO15318 223 aaPredicted RBP18.13■□□□□ 0.49
SF3A2-201ENST00000221494 ERLIN1O75477 346 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 EIF3JO75822 258 aaKnown RBP18.13■□□□□ 0.49
SF3A2-201ENST00000221494 SEC31AO94979 1220 aaKnown RBP18.13■□□□□ 0.49
SF3A2-201ENST00000221494 MARCKSP29966 332 aaPredicted RBP18.13■□□□□ 0.49
SF3A2-201ENST00000221494 SARSP49591 514 aaKnown RBP18.13■□□□□ 0.49
SF3A2-201ENST00000221494 METAP2P50579 478 aaKnown RBP eCLIP18.13■□□□□ 0.496e-7■□□□□ 11
SF3A2-201ENST00000221494 PUM3Q15397 648 aaKnown RBP18.13■□□□□ 0.49
SF3A2-201ENST00000221494 ANKRD18AQ8IVF6 992 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 MSANTD4Q8NCY6 345 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms