RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 HAUS4Q9H6D7 363 aa9.81□□□□□ -0.84
SUPT16H-201ENST00000216297 FANCAO15360 1455 aa9.81□□□□□ -0.84
SUPT16H-201ENST00000216297 E7EWF7 191 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 KRT14P02533 472 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 CDC25AP30304 524 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 AARSP49588 968 aaKnown RBP eCLIP9.8□□□□□ -0.843e-8■■■■■ 28.4
SUPT16H-201ENST00000216297 METAP2P50579 478 aaKnown RBP eCLIP9.8□□□□□ -0.845e-7■□□□□ 8.9
SUPT16H-201ENST00000216297 CCNHP51946 323 aaPredicted RBP9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 IFFO1Q0D2I5 559 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 NBPF20Q3BBV1 942 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 NAA35Q5VZE5 725 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 CYB5D1Q6P9G0 228 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 NLRP14Q86W24 1093 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 TMEM139Q8IV31 216 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 SMYD4Q8IYR2 804 aaPredicted RBP9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 CTNND2Q9UQB3 1225 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 CCDC61Q9Y6R9 512 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 MAP3K4Q9Y6R4 1608 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 ZNF185O15231 689 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 LSP1P33241 339 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 TRIM68Q6AZZ1 485 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 CCDC51Q96ER9 411 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 RRP36Q96EU6 259 aaKnown RBP9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 ACTR5Q9H9F9 607 aaPredicted RBP9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 CFAP65Q6ZU64 1925 aaKnown RBP9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 ABCA6Q8N139 1617 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 CTDNEP1O95476 244 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 CHGBP05060 677 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 KIF5BP33176 963 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 HDLBPQ00341 1268 aaKnown RBP9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 RPUSD2Q8IZ73 545 aaKnown RBP9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 NGDNQ8NEJ9 315 aaKnown RBP9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 PHKBQ93100 1093 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 SLC26A6Q9BXS9 759 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 CCDC113Q9H0I3 377 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 INCENPQ9NQS7 918 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 ADGRL3Q9HAR2 1447 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 CAND2O75155 1236 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 PRPF6O94906 941 aaKnown RBP9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 CXCR5P32302 372 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 GNPTABQ3T906 1256 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 RASGRP2Q7LDG7 609 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 MSL3Q8N5Y2 521 aaKnown RBP9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 ANKS4BQ8N8V4 417 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 KCNB2Q92953 911 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 AIFM3Q96NN9 605 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 ALS2CR12Q96Q35 445 aa9.8□□□□□ -0.84
SUPT16H-201ENST00000216297 PLCH2O75038 1416 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 APBA1Q02410 837 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 KRT40Q6A162 431 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 ZNF274Q96GC6 653 aaPredicted RBP9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 INTS13Q9NVM9 706 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 TFR2Q9UP52 801 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 SMIM24O75264 130 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 ZPR1O75312 459 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 FSBPO95073 299 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 EPHB4P54760 987 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 METTL16Q86W50 562 aaKnown RBP9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 FAM167BQ9BTA0 163 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 EPN3Q9H201 632 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 VCPKMTQ9H867 229 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 COL3A1P02461 1466 aaPredicted RBP9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 HGSO14964 777 aaPredicted RBP9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 PPP1R37O75864 691 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 ABL1P00519 1130 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 CDC25CP30307 473 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 DDR1Q08345 913 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 SPAG5Q96R06 1193 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 DDX20Q9UHI6 824 aaKnown RBP9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 TUBE1Q9UJT0 475 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 MROH7-TTC4A0A0A0MT08 1334 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 AKR1B10O60218 316 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 NDUFA10O95299 355 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 CDC27P30260 824 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 FXR1P51114 621 aaKnown RBP eCLIP9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 PLCD1P51178 756 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 KIF23Q02241 960 aaPredicted RBP9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 RRP12Q5JTH9 1297 aaKnown RBP9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 GKAP1Q5VSY0 366 aaPredicted RBP9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 SPATA1Q5VX52 437 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 SHC4Q6S5L8 630 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 RNPC3Q96LT9 517 aaKnown RBP9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 CCDC42Q96M95 316 aa9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 ALDH8A1Q9H2A2 487 aaPredicted RBP9.79□□□□□ -0.84
SUPT16H-201ENST00000216297 SPHKAPQ2M3C7 1700 aa9.78□□□□□ -0.84
SUPT16H-201ENST00000216297 KNDC1Q76NI1 1749 aa9.78□□□□□ -0.84
SUPT16H-201ENST00000216297 RWDD2BP57060 319 aa9.78□□□□□ -0.84
SUPT16H-201ENST00000216297 IFT20Q8IY31 132 aa9.78□□□□□ -0.84
SUPT16H-201ENST00000216297 TRIM22Q8IYM9 498 aa9.78□□□□□ -0.84
SUPT16H-201ENST00000216297 CCDC63Q8NA47 563 aa9.78□□□□□ -0.84
SUPT16H-201ENST00000216297 NSMCE1Q8WV22 266 aa9.78□□□□□ -0.84
SUPT16H-201ENST00000216297 C21orf2O43822 256 aa9.78□□□□□ -0.84
SUPT16H-201ENST00000216297 MYL6BP14649 208 aa9.78□□□□□ -0.84
SUPT16H-201ENST00000216297 HDGFP51858 240 aaKnown RBP9.78□□□□□ -0.84
SUPT16H-201ENST00000216297 PPARAQ07869 468 aa9.78□□□□□ -0.84
SUPT16H-201ENST00000216297 ALS2CLQ60I27 953 aa9.78□□□□□ -0.84
SUPT16H-201ENST00000216297 TBC1D1Q86TI0 1168 aaPredicted RBP9.78□□□□□ -0.84
SUPT16H-201ENST00000216297 USHBP1Q8N6Y0 703 aa9.78□□□□□ -0.84
SUPT16H-201ENST00000216297 SPDYE1Q8NFV5 336 aaPredicted RBP9.78□□□□□ -0.84
SUPT16H-201ENST00000216297 OR8K1Q8NGG5 319 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms