RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 TBC1D22AQ8WUA7 517 aa15.1■□□□□ 0.01
SF3A1-201ENST00000215793 CCDC87Q9NVE4 849 aa15.1■□□□□ 0.01
SF3A1-201ENST00000215793 ODF2LQ9ULJ1 636 aa15.1■□□□□ 0.01
SF3A1-201ENST00000215793 E7EVH7 732 aa15.1■□□□□ 0.01
SF3A1-201ENST00000215793 EIF6P56537 245 aaKnown RBP15.1■□□□□ 0.01
SF3A1-201ENST00000215793 GABPB2Q8TAK5 448 aaPredicted RBP15.1■□□□□ 0.01
SF3A1-201ENST00000215793 GTF3C6Q969F1 213 aa15.1■□□□□ 0.01
SF3A1-201ENST00000215793 CARD6Q9BX69 1037 aa15.1■□□□□ 0.01
SF3A1-201ENST00000215793 KCNG1Q9UIX4 513 aa15.1■□□□□ 0.01
SF3A1-201ENST00000215793 CCDC160A6NGH7 325 aa15.09■□□□□ 0.01
SF3A1-201ENST00000215793 TTC31Q49AM3 519 aaPredicted RBP15.09■□□□□ 0.01
SF3A1-201ENST00000215793 NCAPH2Q6IBW4 605 aa15.09■□□□□ 0.01
SF3A1-201ENST00000215793 PODXL2Q9NZ53 605 aa15.09■□□□□ 0.01
SF3A1-201ENST00000215793 ZNF532Q9HCE3 1301 aa15.09■□□□□ 0.01
SF3A1-201ENST00000215793 PHKBQ93100 1093 aa15.09■□□□□ 0.01
SF3A1-201ENST00000215793 ZMYND15Q9H091 742 aa15.09■□□□□ 0.01
SF3A1-201ENST00000215793 NDUFAB1O14561 156 aa15.09■□□□□ 0.01
SF3A1-201ENST00000215793 CALCRLQ16602 461 aa15.09■□□□□ 0.01
SF3A1-201ENST00000215793 SYCE1Q8N0S2 351 aa15.09■□□□□ 0.01
SF3A1-201ENST00000215793 CTTNBP2NLQ9P2B4 639 aa15.09■□□□□ 0.01
SF3A1-201ENST00000215793 BCRP11274 1271 aa15.08■□□□□ 0.01
SF3A1-201ENST00000215793 ZAP70P43403 619 aa15.08■□□□□ 0.01
SF3A1-201ENST00000215793 CDAN1Q8IWY9 1227 aa15.08■□□□□ 0.01
SF3A1-201ENST00000215793 EXOC3O60645 756 aa15.08■□□□□ 0
SF3A1-201ENST00000215793 CDC37L1Q7L3B6 337 aa15.08■□□□□ 0
SF3A1-201ENST00000215793 REXO1Q8N1G1 1221 aaKnown RBP15.08■□□□□ 0
SF3A1-201ENST00000215793 NT5C3AQ9H0P0 336 aa15.08■□□□□ 0
SF3A1-201ENST00000215793 TAB2Q9NYJ8 693 aa15.08■□□□□ 0
SF3A1-201ENST00000215793 GMNNO75496 209 aa15.08■□□□□ 0
SF3A1-201ENST00000215793 HPDP32754 393 aaPredicted RBP15.08■□□□□ 0
SF3A1-201ENST00000215793 KLHL30Q0D2K2 578 aa15.08■□□□□ 0
SF3A1-201ENST00000215793 FYB2Q5VWT5 728 aa15.08■□□□□ 0
SF3A1-201ENST00000215793 E7EWF7 191 aa15.08■□□□□ 0
SF3A1-201ENST00000215793 TAF5LO75529 589 aa15.08■□□□□ 0
SF3A1-201ENST00000215793 CABP7Q86V35 215 aa15.08■□□□□ 0
SF3A1-201ENST00000215793 STMN2Q93045 179 aa15.08■□□□□ 0
SF3A1-201ENST00000215793 FAM184BQ9ULE4 1060 aa15.08■□□□□ 0
SF3A1-201ENST00000215793 UAP1Q16222 522 aaPredicted RBP15.07■□□□□ 0
SF3A1-201ENST00000215793 DPP8Q6V1X1 898 aaPredicted RBP15.07■□□□□ 0
SF3A1-201ENST00000215793 CCDC51Q96ER9 411 aa15.07■□□□□ 0
SF3A1-201ENST00000215793 MYL10Q9BUA6 226 aa15.07■□□□□ 0
SF3A1-201ENST00000215793 ZMYM4Q5VZL5 1548 aa15.07■□□□□ 0
SF3A1-201ENST00000215793 STK10O94804 968 aaKnown RBP15.07■□□□□ 0
SF3A1-201ENST00000215793 BRD1O95696 1058 aa15.07■□□□□ 0
SF3A1-201ENST00000215793 EIF4A1P60842 406 aaKnown RBP15.07■□□□□ 0
SF3A1-201ENST00000215793 CTDSPL2Q05D32 466 aa15.07■□□□□ 0
SF3A1-201ENST00000215793 ZNF496Q96IT1 587 aaPredicted RBP15.07■□□□□ 0
SF3A1-201ENST00000215793 GOLGA6CA6NDK9 693 aa15.07■□□□□ 0
SF3A1-201ENST00000215793 NOP56O00567 594 aaKnown RBP15.07■□□□□ 0
SF3A1-201ENST00000215793 RIOK3O14730 519 aaKnown RBP15.07■□□□□ 0
SF3A1-201ENST00000215793 GOLGA6DP0CG33 693 aa15.07■□□□□ 0
SF3A1-201ENST00000215793 PAK2Q13177 524 aa15.07■□□□□ 0
SF3A1-201ENST00000215793 CFAP221Q4G0U5 840 aa15.07■□□□□ 0
SF3A1-201ENST00000215793 ZNF274Q96GC6 653 aaPredicted RBP15.07■□□□□ 0
SF3A1-201ENST00000215793 LMBRD1Q9NUN5 540 aa15.07■□□□□ 0
SF3A1-201ENST00000215793 GOLGA6AQ9NYA3 693 aa15.07■□□□□ 0
SF3A1-201ENST00000215793 MKRN1Q9UHC7 482 aaKnown RBP15.07■□□□□ 0
SF3A1-201ENST00000215793 CEP104O60308 925 aa15.07■□□□□ 0
SF3A1-201ENST00000215793 PDE6BP35913 854 aa15.07■□□□□ 0
SF3A1-201ENST00000215793 MYSM1Q5VVJ2 828 aa15.07■□□□□ 0
SF3A1-201ENST00000215793 ADALQ6DHV7 355 aa15.07■□□□□ 0
SF3A1-201ENST00000215793 DNAJC10Q8IXB1 793 aa15.07■□□□□ 0
SF3A1-201ENST00000215793 TFAP4Q01664 338 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 NELFBQ8WX92 580 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 RPGRIP1Q96KN7 1286 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 ARPP21Q9UBL0 812 aaPredicted RBP15.06■□□□□ 0
SF3A1-201ENST00000215793 SSH2Q76I76 1423 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 GRM1Q13255 1194 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 BEND3Q5T5X7 828 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 TAOK1Q7L7X3 1001 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 MYCT1Q8N699 235 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 ASIC3Q9UHC3 531 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 JAK2O60674 1132 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 ZBED4O75132 1171 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 CIB2O75838 187 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 TPD52P55327 224 aaPredicted RBP15.06■□□□□ 0
SF3A1-201ENST00000215793 RASA3Q14644 834 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 DYMQ7RTS9 669 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 SUPT20HQ8NEM7 779 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 NOL3O60936 208 aaKnown RBP15.06■□□□□ 0
SF3A1-201ENST00000215793 GNA14O95837 355 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 RPS6KA1Q15418 735 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 DCUN1D2Q6PH85 259 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 RSRC1Q96IZ7 334 aaKnown RBP15.06■□□□□ 0
SF3A1-201ENST00000215793 FEZ2Q9UHY8 353 aaPredicted RBP15.06■□□□□ 0
SF3A1-201ENST00000215793 KCNJ14Q9UNX9 436 aa15.06■□□□□ 0
SF3A1-201ENST00000215793 ERCC6LQ2NKX8 1250 aa15.05■□□□□ 0
SF3A1-201ENST00000215793 SFMBT2Q5VUG0 894 aa15.05■□□□□ 0
SF3A1-201ENST00000215793 PPP1R21Q6ZMI0 780 aa15.05■□□□□ 0
SF3A1-201ENST00000215793 IWS1Q96ST2 819 aa15.05■□□□□ 0
SF3A1-201ENST00000215793 WWC3Q9ULE0 1092 aa15.05■□□□□ 0
SF3A1-201ENST00000215793 IVNS1ABPQ9Y6Y0 642 aa15.05■□□□□ 0
SF3A1-201ENST00000215793 RNASE9P60153 205 aaKnown RBP15.05■□□□□ 0
SF3A1-201ENST00000215793 MCTP2Q6DN12 878 aa15.05■□□□□ 0
SF3A1-201ENST00000215793 SSH3Q8TE77 659 aa15.05■□□□□ 0
SF3A1-201ENST00000215793 MAIP1Q8WWC4 291 aa15.05■□□□□ 0
SF3A1-201ENST00000215793 AZI2Q9H6S1 392 aa15.05■□□□□ 0
SF3A1-201ENST00000215793 ARHGEF10O15013 1369 aa15.05■□□□□ -0
SF3A1-201ENST00000215793 GOLGA6BA6NDN3 693 aa15.05■□□□□ -0
SF3A1-201ENST00000215793 MYCLP12524 364 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms