RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 ZMYM6O95789 1325 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 ZRANB2O95218 330 aaKnown RBP eCLIP12.67□□□□□ -0.38
ACTN1-201ENST00000193403 ANTXR2P58335 489 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 MAP3K9P80192 1104 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 CCDC122Q5T0U0 273 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 NGLY1Q96IV0 654 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 BTG4Q9NY30 223 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 ADGRL3Q9HAR2 1447 aa12.67□□□□□ -0.38
ACTN1-201ENST00000193403 VSNL1P62760 191 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 CASP8Q14790 479 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 AFAP1L1Q8TED9 768 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 EXOC4Q96A65 974 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 EPSTI1Q96J88 318 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 FUT8Q9BYC5 575 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 HPS5Q9UPZ3 1129 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 ITSN1Q15811 1721 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 SNAP23O00161 211 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 FOXR1Q6PIV2 292 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 RAD9BQ6WBX8 426 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 FOXP4Q8IVH2 680 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-201ENST00000193403 SRGAP2O75044 1071 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 GUCY1A2P33402 732 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 MNAT1P51948 309 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 CNGA4Q8IV77 575 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 MB21D2Q8IYB1 491 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-201ENST00000193403 SYNE4Q8N205 404 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 RIN2Q8WYP3 895 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-201ENST00000193403 ACSBG1Q96GR2 724 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 PNKPQ96T60 521 aa12.66□□□□□ -0.38
ACTN1-201ENST00000193403 TRIM21P19474 475 aaKnown RBP12.65□□□□□ -0.38
ACTN1-201ENST00000193403 MAP9Q49MG5 647 aa12.65□□□□□ -0.38
ACTN1-201ENST00000193403 ATG9AQ7Z3C6 839 aa12.65□□□□□ -0.38
ACTN1-201ENST00000193403 FCHSD1Q86WN1 690 aa12.65□□□□□ -0.38
ACTN1-201ENST00000193403 TFR2Q9UP52 801 aa12.65□□□□□ -0.38
ACTN1-201ENST00000193403 SLC4A4Q9Y6R1 1079 aa12.65□□□□□ -0.38
ACTN1-201ENST00000193403 MCM7P33993 719 aa12.65□□□□□ -0.38
ACTN1-201ENST00000193403 LIG3P49916 1009 aa12.65□□□□□ -0.38
ACTN1-201ENST00000193403 RESP18Q5W5W9 173 aa12.65□□□□□ -0.38
ACTN1-201ENST00000193403 TRIM47Q96LD4 638 aa12.65□□□□□ -0.38
ACTN1-201ENST00000193403 POLD4Q9HCU8 107 aa12.65□□□□□ -0.38
ACTN1-201ENST00000193403 FAM170AA1A519 330 aa12.65□□□□□ -0.39
ACTN1-201ENST00000193403 PPP6R2O75170 966 aa12.65□□□□□ -0.39
ACTN1-201ENST00000193403 PHKG2P15735 406 aa12.65□□□□□ -0.39
ACTN1-201ENST00000193403 KANK3Q6NY19 840 aa12.65□□□□□ -0.39
ACTN1-201ENST00000193403 GNL3LQ9NVN8 582 aaKnown RBP12.65□□□□□ -0.39
ACTN1-201ENST00000193403 TMOD3Q9NYL9 352 aa12.65□□□□□ -0.39
ACTN1-201ENST00000193403 HDAC6Q9UBN7 1215 aa12.65□□□□□ -0.39
ACTN1-201ENST00000193403 PEAK1Q9H792 1746 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 ZEB2O60315 1214 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 RILPL1Q5EBL4 403 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 OXER1Q8TDS5 423 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 ADGRG1Q9Y653 693 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 ATP8B1O43520 1251 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 RNF40O75150 1001 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 SETQ01105 290 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-201ENST00000193403 MAP3K12Q12852 859 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 ARHGEF25Q86VW2 580 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 TRIM10Q9UDY6 481 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 FAM205CA6NFA0 338 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 FANCGO15287 622 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 PLCD1P51178 756 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 ATP2B2Q01814 1243 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 SRLQ86TD4 932 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 CCDC24Q8N4L8 307 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 CTAGE1Q96RT6 745 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 INTS13Q9NVM9 706 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 TUBE1Q9UJT0 475 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 WWC3Q9ULE0 1092 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 MYO6Q9UM54 1294 aa12.64□□□□□ -0.39
ACTN1-201ENST00000193403 ANKRD18BA2A2Z9 1011 aa12.63□□□□□ -0.39
ACTN1-201ENST00000193403 NLRP5P59047 1200 aa12.63□□□□□ -0.39
ACTN1-201ENST00000193403 NOA1Q8NC60 698 aaKnown RBP12.63□□□□□ -0.39
ACTN1-201ENST00000193403 CCDC196A0A1B0GTZ2 297 aa12.63□□□□□ -0.39
ACTN1-201ENST00000193403 SHTN1A0MZ66 631 aa12.63□□□□□ -0.39
ACTN1-201ENST00000193403 PATL2C9JE40 543 aaKnown RBP12.63□□□□□ -0.39
ACTN1-201ENST00000193403 PRKAB2O43741 272 aa12.63□□□□□ -0.39
ACTN1-201ENST00000193403 KIAA0754O94854 1291 aa12.63□□□□□ -0.39
ACTN1-201ENST00000193403 CCDC96Q2M329 555 aa12.63□□□□□ -0.39
ACTN1-201ENST00000193403 TTF2Q9UNY4 1162 aaKnown RBP12.63□□□□□ -0.39
ACTN1-201ENST00000193403 V9GY48 417 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-201ENST00000193403 C3P01024 1663 aa12.63□□□□□ -0.39
ACTN1-201ENST00000193403 SH2B2O14492 632 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-201ENST00000193403 CCT5P48643 541 aa12.63□□□□□ -0.39
ACTN1-201ENST00000193403 RNF187Q5TA31 235 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-201ENST00000193403 ENOX1Q8TC92 643 aaKnown RBP12.63□□□□□ -0.39
ACTN1-201ENST00000193403 SYMPKQ92797 1274 aaKnown RBP12.63□□□□□ -0.39
ACTN1-201ENST00000193403 TANGO6Q9C0B7 1094 aa12.63□□□□□ -0.39
ACTN1-201ENST00000193403 NEDD4P46934 1319 aa12.62□□□□□ -0.39
ACTN1-201ENST00000193403 ITGA6P23229 1130 aa12.62□□□□□ -0.39
ACTN1-201ENST00000193403 STIM1Q13586 685 aa12.62□□□□□ -0.39
ACTN1-201ENST00000193403 DCAF5Q96JK2 942 aa12.62□□□□□ -0.39
ACTN1-201ENST00000193403 ZHX3Q9H4I2 956 aa12.62□□□□□ -0.39
ACTN1-201ENST00000193403 LUC7L2Q9Y383 392 aaKnown RBP12.62□□□□□ -0.39
ACTN1-201ENST00000193403 UBN2Q6ZU65 1347 aa12.62□□□□□ -0.39
ACTN1-201ENST00000193403 SALL1Q9NSC2 1324 aa12.62□□□□□ -0.39
ACTN1-201ENST00000193403 ZPR1O75312 459 aa12.62□□□□□ -0.39
ACTN1-201ENST00000193403 SSBP05455 408 aaKnown RBP eCLIP12.62□□□□□ -0.39
ACTN1-201ENST00000193403 IDEP14735 1019 aa12.62□□□□□ -0.39
ACTN1-201ENST00000193403 PHKA1P46020 1223 aa12.62□□□□□ -0.39
ACTN1-201ENST00000193403 MTIF2P46199 727 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms