RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 PDE6AP16499 860 aa25.88■■□□□ 1.73
TARBP1-201ENST00000040877 CA8P35219 290 aa25.88■■□□□ 1.73
TARBP1-201ENST00000040877 GTF2IP78347 998 aa25.88■■□□□ 1.73
TARBP1-201ENST00000040877 CYP26C1Q6V0L0 522 aa25.88■■□□□ 1.73
TARBP1-201ENST00000040877 MYL10Q9BUA6 226 aa25.88■■□□□ 1.73
TARBP1-201ENST00000040877 TNFAIP3P21580 790 aa25.88■■□□□ 1.73
TARBP1-201ENST00000040877 ARFGAP2Q8N6H7 521 aa25.88■■□□□ 1.73
TARBP1-201ENST00000040877 CALCOCO2Q13137 446 aa25.87■■□□□ 1.73
TARBP1-201ENST00000040877 NLGN1Q8N2Q7 840 aa25.87■■□□□ 1.73
TARBP1-201ENST00000040877 AZI2Q9H6S1 392 aa25.87■■□□□ 1.73
TARBP1-201ENST00000040877 NDUFB9Q9Y6M9 179 aa25.87■■□□□ 1.73
TARBP1-201ENST00000040877 LOC102724428A0A0B4J2F2 783 aa25.87■■□□□ 1.73
TARBP1-201ENST00000040877 USP17L12C9JPN9 530 aa25.87■■□□□ 1.73
TARBP1-201ENST00000040877 USP17L21D6R901 530 aa25.87■■□□□ 1.73
TARBP1-201ENST00000040877 SEMA3EO15041 775 aa25.87■■□□□ 1.73
TARBP1-201ENST00000040877 SIK1P57059 783 aa25.87■■□□□ 1.73
TARBP1-201ENST00000040877 IFNL3Q8IZI9 196 aa25.87■■□□□ 1.73
TARBP1-201ENST00000040877 PLEKHF1Q96S99 279 aa25.87■■□□□ 1.73
TARBP1-201ENST00000040877 GPHNQ9NQX3 736 aaPredicted RBP25.87■■□□□ 1.73
TARBP1-201ENST00000040877 H7C1D1 291 aa25.87■■□□□ 1.73
TARBP1-201ENST00000040877 HERC4Q5GLZ8 1057 aaPredicted RBP25.87■■□□□ 1.73
TARBP1-201ENST00000040877 AS3MTQ9HBK9 375 aa25.87■■□□□ 1.73
TARBP1-201ENST00000040877 IMPACTQ9P2X3 320 aa25.87■■□□□ 1.73
TARBP1-201ENST00000040877 MCM6Q14566 821 aa25.86■■□□□ 1.73
TARBP1-201ENST00000040877 USP6P35125 1406 aa25.86■■□□□ 1.73
TARBP1-201ENST00000040877 MYCLP12524 364 aaPredicted RBP25.86■■□□□ 1.73
TARBP1-201ENST00000040877 ZYXQ15942 572 aaKnown RBP25.86■■□□□ 1.73
TARBP1-201ENST00000040877 CNKSR1Q969H4 720 aa25.86■■□□□ 1.73
TARBP1-201ENST00000040877 CEP128Q6ZU80 1094 aa25.86■■□□□ 1.73
TARBP1-201ENST00000040877 POSTNQ15063 836 aa25.86■■□□□ 1.73
TARBP1-201ENST00000040877 OTUD7BQ6GQQ9 843 aa25.86■■□□□ 1.73
TARBP1-201ENST00000040877 VPS16Q9H269 839 aa25.86■■□□□ 1.73
TARBP1-201ENST00000040877 TCP10Q12799 353 aa25.85■■□□□ 1.73
TARBP1-201ENST00000040877 UBE3CQ15386 1083 aa25.85■■□□□ 1.73
TARBP1-201ENST00000040877 GALNT17Q6IS24 598 aa25.85■■□□□ 1.73
TARBP1-201ENST00000040877 TMC4Q7Z404 712 aa25.85■■□□□ 1.73
TARBP1-201ENST00000040877 CABP7Q86V35 215 aa25.85■■□□□ 1.73
TARBP1-201ENST00000040877 PPM1EQ8WY54 764 aa25.85■■□□□ 1.73
TARBP1-201ENST00000040877 ZSCAN10Q96SZ4 725 aaPredicted RBP25.85■■□□□ 1.73
TARBP1-201ENST00000040877 KDM3AQ9Y4C1 1321 aa25.85■■□□□ 1.73
TARBP1-201ENST00000040877 FANCCQ00597 558 aa25.85■■□□□ 1.73
TARBP1-201ENST00000040877 CCDC14Q49A88 953 aa25.85■■□□□ 1.73
TARBP1-201ENST00000040877 CCDC24Q8N4L8 307 aa25.85■■□□□ 1.73
TARBP1-201ENST00000040877 TRPC3Q13507 836 aa25.85■■□□□ 1.73
TARBP1-201ENST00000040877 CCDC26Q8TAB7 109 aa25.85■■□□□ 1.73
TARBP1-201ENST00000040877 NOX5Q96PH1 765 aa25.85■■□□□ 1.73
TARBP1-201ENST00000040877 KRT5P13647 590 aa25.85■■□□□ 1.73
TARBP1-201ENST00000040877 SYT10Q6XYQ8 523 aa25.85■■□□□ 1.73
TARBP1-201ENST00000040877 LIN9Q5TKA1 542 aa25.84■■□□□ 1.73
TARBP1-201ENST00000040877 NSMFQ6X4W1 530 aa25.84■■□□□ 1.73
TARBP1-201ENST00000040877 CCDC84Q86UT8 332 aaPredicted RBP25.84■■□□□ 1.73
TARBP1-201ENST00000040877 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.84■■□□□ 1.73
TARBP1-201ENST00000040877 CAPZA3Q96KX2 299 aa25.84■■□□□ 1.73
TARBP1-201ENST00000040877 TAF12Q16514 161 aa25.84■■□□□ 1.73
TARBP1-201ENST00000040877 GPATCH11Q8N954 259 aa25.84■■□□□ 1.73
TARBP1-201ENST00000040877 NOD1Q9Y239 953 aa25.84■■□□□ 1.73
TARBP1-201ENST00000040877 TRPC5Q9UL62 973 aaPredicted RBP25.83■■□□□ 1.73
TARBP1-201ENST00000040877 CFBP00751 764 aa25.83■■□□□ 1.73
TARBP1-201ENST00000040877 PPP1R7Q15435 360 aa25.83■■□□□ 1.73
TARBP1-201ENST00000040877 ASIC2Q16515 512 aa25.83■■□□□ 1.73
TARBP1-201ENST00000040877 CDC37L1Q7L3B6 337 aa25.83■■□□□ 1.73
TARBP1-201ENST00000040877 CCDC94Q9BW85 323 aaPredicted RBP25.83■■□□□ 1.73
TARBP1-201ENST00000040877 ANKARQ7Z5J8 1434 aa25.83■■□□□ 1.73
TARBP1-201ENST00000040877 DNM2P50570 870 aa25.83■■□□□ 1.73
TARBP1-201ENST00000040877 ZNF445P59923 1031 aa25.83■■□□□ 1.73
TARBP1-201ENST00000040877 MYSM1Q5VVJ2 828 aa25.83■■□□□ 1.73
TARBP1-201ENST00000040877 CPXCR1Q8N123 301 aa25.83■■□□□ 1.73
TARBP1-201ENST00000040877 IWS1Q96ST2 819 aa25.83■■□□□ 1.73
TARBP1-201ENST00000040877 PPP1R9BQ96SB3 815 aa25.83■■□□□ 1.72
TARBP1-201ENST00000040877 PDE8BO95263 885 aa25.82■■□□□ 1.72
TARBP1-201ENST00000040877 SLC9C1Q4G0N8 1177 aa25.82■■□□□ 1.72
TARBP1-201ENST00000040877 DCAF15Q66K64 600 aa25.82■■□□□ 1.72
TARBP1-201ENST00000040877 TMTC1Q8IUR5 882 aa25.82■■□□□ 1.72
TARBP1-201ENST00000040877 MAK16Q9BXY0 300 aaKnown RBP25.82■■□□□ 1.72
TARBP1-201ENST00000040877 NUCKS1Q9H1E3 243 aaKnown RBP25.82■■□□□ 1.72
TARBP1-201ENST00000040877 HSPD1P10809 573 aaKnown RBP25.82■■□□□ 1.72
TARBP1-201ENST00000040877 NLRX1Q86UT6 975 aa25.82■■□□□ 1.72
TARBP1-201ENST00000040877 TXNDC16Q9P2K2 825 aa25.82■■□□□ 1.72
TARBP1-201ENST00000040877 KCNJ14Q9UNX9 436 aa25.82■■□□□ 1.72
TARBP1-201ENST00000040877 WDR17Q8IZU2 1322 aa25.82■■□□□ 1.72
TARBP1-201ENST00000040877 SMCO2A6NFE2 343 aa25.82■■□□□ 1.72
TARBP1-201ENST00000040877 PFKFB2O60825 505 aa25.82■■□□□ 1.72
TARBP1-201ENST00000040877 BRD1O95696 1058 aa25.82■■□□□ 1.72
TARBP1-201ENST00000040877 STAP2Q9UGK3 403 aa25.82■■□□□ 1.72
TARBP1-201ENST00000040877 IVLP07476 585 aa25.82■■□□□ 1.72
TARBP1-201ENST00000040877 HARSP12081 509 aaKnown RBP25.82■■□□□ 1.72
TARBP1-201ENST00000040877 IRX3P78415 501 aaPredicted RBP25.82■■□□□ 1.72
TARBP1-201ENST00000040877 CHRNDQ07001 517 aa25.82■■□□□ 1.72
TARBP1-201ENST00000040877 FAM173BQ6P4H8 233 aa25.82■■□□□ 1.72
TARBP1-201ENST00000040877 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.82■■□□□ 1.72
TARBP1-201ENST00000040877 A0A0D9SFI3 127 aa25.81■■□□□ 1.72
TARBP1-201ENST00000040877 FAM47AQ5JRC9 791 aa25.81■■□□□ 1.72
TARBP1-201ENST00000040877 CCDC117Q8IWD4 279 aaPredicted RBP25.81■■□□□ 1.72
TARBP1-201ENST00000040877 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.81■■□□□ 1.72
TARBP1-201ENST00000040877 JAK2O60674 1132 aa25.81■■□□□ 1.72
TARBP1-201ENST00000040877 DDAH1O94760 285 aa25.81■■□□□ 1.72
TARBP1-201ENST00000040877 VPS54Q9P1Q0 977 aa25.81■■□□□ 1.72
TARBP1-201ENST00000040877 ADALQ6DHV7 355 aa25.81■■□□□ 1.72
TARBP1-201ENST00000040877 ZSWIM6Q9HCJ5 1215 aa25.81■■□□□ 1.72
TARBP1-201ENST00000040877 SPOPO43791 374 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms