RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 ATP2B2Q01814 1243 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 MICU3Q86XE3 530 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 TICAM2Q86XR7 235 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 MICALL2Q8IY33 904 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 CCDC88AQ3V6T2 1871 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 KLF18A0A0U1RQI7 1052 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 VGLL3A8MV65 326 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 ZSCAN22P10073 491 aaPredicted RBP12.31□□□□□ -0.44
CD4-201ENST00000011653 TNIP1Q15025 636 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 ALX1Q15699 326 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 UBAC1Q9BSL1 405 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 ATP6V1DQ9Y5K8 247 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 GAKO14976 1311 aa12.3□□□□□ -0.44
CD4-201ENST00000011653 ASTN2O75129 1339 aaPredicted RBP12.3□□□□□ -0.44
CD4-201ENST00000011653 DOCK2Q92608 1830 aa12.3□□□□□ -0.44
CD4-201ENST00000011653 MPHOSPH10O00566 681 aaKnown RBP12.3□□□□□ -0.44
CD4-201ENST00000011653 LMNB1P20700 586 aa12.3□□□□□ -0.44
CD4-201ENST00000011653 CCDC183Q5T5S1 534 aa12.3□□□□□ -0.44
CD4-201ENST00000011653 PRAMEF18Q5VWM3 479 aa12.3□□□□□ -0.44
CD4-201ENST00000011653 C9orf131Q5VYM1 1079 aa12.3□□□□□ -0.44
CD4-201ENST00000011653 HHIPL2Q6UWX4 724 aa12.3□□□□□ -0.44
CD4-201ENST00000011653 CRACR2BQ8N4Y2 399 aaPredicted RBP12.3□□□□□ -0.44
CD4-201ENST00000011653 CNOT7Q9UIV1 285 aaKnown RBP12.3□□□□□ -0.44
CD4-201ENST00000011653 SMC3Q9UQE7 1217 aa12.3□□□□□ -0.44
CD4-201ENST00000011653 LETM1O95202 739 aaPredicted RBP12.3□□□□□ -0.44
CD4-201ENST00000011653 SLC3A2P08195 630 aaKnown RBP12.3□□□□□ -0.44
CD4-201ENST00000011653 PDE4BQ07343 736 aa12.3□□□□□ -0.44
CD4-201ENST00000011653 TSGA10IPQ3SY00 556 aa12.3□□□□□ -0.44
CD4-201ENST00000011653 CLEC10AQ8IUN9 316 aa12.3□□□□□ -0.44
CD4-201ENST00000011653 MB21D2Q8IYB1 491 aaPredicted RBP12.3□□□□□ -0.44
CD4-201ENST00000011653 ZNF444Q8N0Y2 327 aaPredicted RBP12.3□□□□□ -0.44
CD4-201ENST00000011653 TMOD2Q9NZR1 351 aa12.3□□□□□ -0.44
CD4-201ENST00000011653 ARPP21Q9UBL0 812 aaPredicted RBP12.3□□□□□ -0.44
CD4-201ENST00000011653 SUGT1Q9Y2Z0 365 aa12.3□□□□□ -0.44
CD4-201ENST00000011653 ERICH2A1L162 156 aa12.29□□□□□ -0.44
CD4-201ENST00000011653 STX6O43752 255 aa12.29□□□□□ -0.44
CD4-201ENST00000011653 HMGB1P09429 215 aaKnown RBP12.29□□□□□ -0.44
CD4-201ENST00000011653 TFAP4Q01664 338 aa12.29□□□□□ -0.44
CD4-201ENST00000011653 UVSSAQ2YD98 709 aa12.29□□□□□ -0.44
CD4-201ENST00000011653 C12orf60Q5U649 245 aa12.29□□□□□ -0.44
CD4-201ENST00000011653 CDAN1Q8IWY9 1227 aa12.29□□□□□ -0.44
CD4-201ENST00000011653 PIBF1Q8WXW3 757 aa12.29□□□□□ -0.44
CD4-201ENST00000011653 ESR2Q92731 530 aa12.29□□□□□ -0.44
CD4-201ENST00000011653 ZDHHC15Q96MV8 337 aa12.29□□□□□ -0.44
CD4-201ENST00000011653 TRIM34Q9BYJ4 488 aa12.29□□□□□ -0.44
CD4-201ENST00000011653 RNF41Q9H4P4 317 aaPredicted RBP12.29□□□□□ -0.44
CD4-201ENST00000011653 STX8Q9UNK0 236 aa12.29□□□□□ -0.44
CD4-201ENST00000011653 GOLGA8BA8MQT2 603 aa12.29□□□□□ -0.44
CD4-201ENST00000011653 CMTR1Q8N1G2 835 aaKnown RBP12.29□□□□□ -0.44
CD4-201ENST00000011653 FAM163AQ96GL9 167 aaPredicted RBP12.29□□□□□ -0.44
CD4-201ENST00000011653 ADAMTSL1Q8N6G6 1762 aa12.29□□□□□ -0.44
CD4-201ENST00000011653 DDTLA6NHG4 134 aaPredicted RBP12.28□□□□□ -0.44
CD4-201ENST00000011653 EXOSC10Q01780 885 aaKnown RBP12.28□□□□□ -0.44
CD4-201ENST00000011653 MIGA2Q7L4E1 593 aa12.28□□□□□ -0.44
CD4-201ENST00000011653 KRT23Q9C075 422 aa12.28□□□□□ -0.44
CD4-201ENST00000011653 PDCL3Q9H2J4 239 aa12.28□□□□□ -0.44
CD4-201ENST00000011653 CNPY2Q9Y2B0 182 aa12.28□□□□□ -0.44
CD4-201ENST00000011653 TSPY3P0CV98 308 aa12.28□□□□□ -0.44
CD4-201ENST00000011653 TSPY8P0CW00 308 aa12.28□□□□□ -0.44
CD4-201ENST00000011653 SYT1P21579 422 aa12.28□□□□□ -0.44
CD4-201ENST00000011653 UBE2HP62256 183 aa12.28□□□□□ -0.44
CD4-201ENST00000011653 MYOZ2Q9NPC6 264 aa12.28□□□□□ -0.44
CD4-201ENST00000011653 SERPINA10Q9UK55 444 aa12.28□□□□□ -0.44
CD4-201ENST00000011653 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
CD4-201ENST00000011653 CCDC69A6NI79 296 aa12.28□□□□□ -0.44
CD4-201ENST00000011653 JAK2O60674 1132 aa12.28□□□□□ -0.44
CD4-201ENST00000011653 F13A1P00488 732 aa12.28□□□□□ -0.44
CD4-201ENST00000011653 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
CD4-201ENST00000011653 SHROOM1Q2M3G4 852 aaPredicted RBP12.28□□□□□ -0.44
CD4-201ENST00000011653 STAG1Q8WVM7 1258 aa12.28□□□□□ -0.44
CD4-201ENST00000011653 KIF13BQ9NQT8 1826 aa12.27□□□□□ -0.44
CD4-201ENST00000011653 WNT10BO00744 389 aa12.27□□□□□ -0.44
CD4-201ENST00000011653 EPS15P42566 896 aa12.27□□□□□ -0.44
CD4-201ENST00000011653 CDK8P49336 464 aa12.27□□□□□ -0.44
CD4-201ENST00000011653 WTAPQ15007 396 aa12.27□□□□□ -0.44
CD4-201ENST00000011653 ANKRD1Q15327 319 aa12.27□□□□□ -0.44
CD4-201ENST00000011653 DLK2Q6UY11 383 aa12.27□□□□□ -0.44
CD4-201ENST00000011653 TMEM39BQ9GZU3 492 aa12.27□□□□□ -0.44
CD4-201ENST00000011653 OSBPL5Q9H0X9 879 aaPredicted RBP12.27□□□□□ -0.44
CD4-201ENST00000011653 CNNM2Q9H8M5 875 aa12.27□□□□□ -0.44
CD4-201ENST00000011653 FAM198AQ9UFP1 575 aa12.27□□□□□ -0.44
CD4-201ENST00000011653 BAZ2BQ9UIF8 2168 aaKnown RBP12.27□□□□□ -0.44
CD4-201ENST00000011653 TNKSO95271 1327 aa12.27□□□□□ -0.45
CD4-201ENST00000011653 MYO1BO43795 1136 aa12.27□□□□□ -0.45
CD4-201ENST00000011653 PRKG1Q13976 671 aa12.27□□□□□ -0.45
CD4-201ENST00000011653 SART3Q15020 963 aaKnown RBP12.27□□□□□ -0.45
CD4-201ENST00000011653 CSRNP1Q96S65 589 aa12.27□□□□□ -0.45
CD4-201ENST00000011653 GMLQ99445 158 aa12.27□□□□□ -0.45
CD4-201ENST00000011653 MKRN1Q9UHC7 482 aaKnown RBP12.27□□□□□ -0.45
CD4-201ENST00000011653 ANGEL1Q9UNK9 670 aaKnown RBP12.27□□□□□ -0.45
CD4-201ENST00000011653 DLEC1Q9Y238 1755 aa12.27□□□□□ -0.45
CD4-201ENST00000011653 MYO3BQ8WXR4 1341 aa12.26□□□□□ -0.45
CD4-201ENST00000011653 SOCS7O14512 581 aa12.26□□□□□ -0.45
CD4-201ENST00000011653 HLA-DOAP06340 250 aa12.26□□□□□ -0.45
CD4-201ENST00000011653 IQCA1Q86XH1 822 aa12.26□□□□□ -0.45
CD4-201ENST00000011653 CNPY4Q8N129 248 aa12.26□□□□□ -0.45
CD4-201ENST00000011653 ZSCAN31Q96LW9 406 aaPredicted RBP12.26□□□□□ -0.45
CD4-201ENST00000011653 ZNF70Q9UC06 446 aaPredicted RBP12.26□□□□□ -0.45
CD4-201ENST00000011653 FZD1Q9UP38 647 aa12.26□□□□□ -0.45
CD4-201ENST00000011653 UQCRHLA0A096LP55 91 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms