RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 HOOK1Q9UJC3 728 aaKnown RBP16.01■□□□□ 0.15
USH1C-201ENST00000005226 AKR1B15C9JRZ8 316 aaPredicted RBP16.01■□□□□ 0.15
USH1C-201ENST00000005226 LIFRP42702 1097 aa16.01■□□□□ 0.15
USH1C-201ENST00000005226 AKNAD1Q5T1N1 836 aa16.01■□□□□ 0.15
USH1C-201ENST00000005226 NUTM2AQ8IVF1 878 aaPredicted RBP16.01■□□□□ 0.15
USH1C-201ENST00000005226 PLA2G12BQ9BX93 195 aa16.01■□□□□ 0.15
USH1C-201ENST00000005226 FUT8Q9BYC5 575 aa16.01■□□□□ 0.15
USH1C-201ENST00000005226 ARFGAP3Q9NP61 516 aa16.01■□□□□ 0.15
USH1C-201ENST00000005226 IQSEC3Q9UPP2 1182 aaPredicted RBP16.01■□□□□ 0.15
USH1C-201ENST00000005226 TDO2P48775 406 aa16■□□□□ 0.15
USH1C-201ENST00000005226 TRIM28Q13263 835 aaKnown RBP16■□□□□ 0.15
USH1C-201ENST00000005226 RASGRF1Q13972 1273 aa16■□□□□ 0.15
USH1C-201ENST00000005226 WTAPQ15007 396 aa16■□□□□ 0.15
USH1C-201ENST00000005226 TRIM22Q8IYM9 498 aa16■□□□□ 0.15
USH1C-201ENST00000005226 CRACR2BQ8N4Y2 399 aaPredicted RBP16■□□□□ 0.15
USH1C-201ENST00000005226 IGSF22Q8N9C0 903 aa16■□□□□ 0.15
USH1C-201ENST00000005226 VPS54Q9P1Q0 977 aa16■□□□□ 0.15
USH1C-201ENST00000005226 NT5DC1Q5TFE4 455 aa16■□□□□ 0.15
USH1C-201ENST00000005226 SPATA5Q8NB90 893 aa16■□□□□ 0.15
USH1C-201ENST00000005226 UBXN6Q9BZV1 441 aa16■□□□□ 0.15
USH1C-201ENST00000005226 SUGCTQ9HAC7 445 aa16■□□□□ 0.15
USH1C-201ENST00000005226 TMOD3Q9NYL9 352 aa16■□□□□ 0.15
USH1C-201ENST00000005226 CALCOCO1Q9P1Z2 691 aa16■□□□□ 0.15
USH1C-201ENST00000005226 H3BQF6 201 aa15.99■□□□□ 0.15
USH1C-201ENST00000005226 TPM1P09493 284 aa15.99■□□□□ 0.15
USH1C-201ENST00000005226 CDC25AP30304 524 aa15.99■□□□□ 0.15
USH1C-201ENST00000005226 PLCD1P51178 756 aa15.99■□□□□ 0.15
USH1C-201ENST00000005226 WWC2Q6AWC2 1192 aa15.99■□□□□ 0.15
USH1C-201ENST00000005226 GIGYF2Q6Y7W6 1299 aaKnown RBP15.99■□□□□ 0.15
USH1C-201ENST00000005226 APTXQ7Z2E3 356 aaKnown RBP15.99■□□□□ 0.15
USH1C-201ENST00000005226 SRPRBQ9Y5M8 271 aaKnown RBP15.99■□□□□ 0.15
USH1C-201ENST00000005226 ADGRG1Q9Y653 693 aa15.99■□□□□ 0.15
USH1C-201ENST00000005226 SLC4A4Q9Y6R1 1079 aa15.99■□□□□ 0.15
USH1C-201ENST00000005226 DDX60Q8IY21 1712 aaKnown RBP15.99■□□□□ 0.15
USH1C-201ENST00000005226 A0A1B0GTH6 734 aa15.99■□□□□ 0.15
USH1C-201ENST00000005226 MINDY4BA8MYZ0 360 aa15.99■□□□□ 0.15
USH1C-201ENST00000005226 CAPN2P17655 700 aa15.99■□□□□ 0.15
USH1C-201ENST00000005226 LONRF2Q1L5Z9 754 aa15.99■□□□□ 0.15
USH1C-201ENST00000005226 RILPL1Q5EBL4 403 aa15.99■□□□□ 0.15
USH1C-201ENST00000005226 ZNF569Q5MCW4 686 aa15.99■□□□□ 0.15
USH1C-201ENST00000005226 PIGBQ92521 554 aa15.99■□□□□ 0.15
USH1C-201ENST00000005226 GOLGA1Q92805 767 aa15.99■□□□□ 0.15
USH1C-201ENST00000005226 MST1RQ04912 1400 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 CCDC175P0C221 793 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 IL2RBP14784 551 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 CASP14P31944 242 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 CCT6AP40227 531 aaKnown RBP15.98■□□□□ 0.15
USH1C-201ENST00000005226 MCM6Q14566 821 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 PPFIBP1Q86W92 1011 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 ACRBPQ8NEB7 543 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 ZFP91Q96JP5 570 aaPredicted RBP15.98■□□□□ 0.15
USH1C-201ENST00000005226 CDC5LQ99459 802 aaKnown RBP15.98■□□□□ 0.15
USH1C-201ENST00000005226 ECM29Q5VYK3 1845 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 SPATA31A3Q5VYP0 1347 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 MAP3K15Q6ZN16 1313 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 WDR17Q8IZU2 1322 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 MYH7P12883 1935 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 RNF225M0QZC1 329 aaPredicted RBP15.98■□□□□ 0.15
USH1C-201ENST00000005226 MYO1BO43795 1136 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 DPYDQ12882 1025 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 FANCBQ8NB91 859 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 WASF1Q92558 559 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 RABGGTAQ92696 567 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 PKD1L3Q7Z443 1732 aa15.98■□□□□ 0.15
USH1C-201ENST00000005226 STK36Q9NRP7 1315 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 GOLGA6L9A6NEM1 432 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 TXLNAP40222 546 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 BCAMP50895 628 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 FXR1P51114 621 aaKnown RBP eCLIP15.97■□□□□ 0.15
USH1C-201ENST00000005226 ZNF174Q15697 407 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 BBXQ8WY36 941 aaPredicted RBP15.97■□□□□ 0.15
USH1C-201ENST00000005226 PNKPQ96T60 521 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 BLZF1Q9H2G9 400 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 FOXP1Q9H334 677 aaPredicted RBP15.97■□□□□ 0.15
USH1C-201ENST00000005226 DACH1Q9UI36 760 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 KAT6BQ8WYB5 2073 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 ABCC12Q96J65 1359 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 VGLL3A8MV65 326 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 RHOXF2BP0C7M4 288 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 ARID4AP29374 1257 aaPredicted RBP15.97■□□□□ 0.15
USH1C-201ENST00000005226 CHMP4BP1P59074 171 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 ZNF654Q8IZM8 581 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 SDR42E1Q8WUS8 393 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 PAGE5Q96GU1 130 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 RHOXF2Q9BQY4 288 aa15.97■□□□□ 0.15
USH1C-201ENST00000005226 MAP3K12Q12852 859 aa15.96■□□□□ 0.15
USH1C-201ENST00000005226 NKX1-1Q15270 411 aaPredicted RBP15.96■□□□□ 0.15
USH1C-201ENST00000005226 ALX1Q15699 326 aa15.96■□□□□ 0.15
USH1C-201ENST00000005226 SYMPKQ92797 1274 aaKnown RBP15.96■□□□□ 0.15
USH1C-201ENST00000005226 ANKZF1Q9H8Y5 726 aa15.96■□□□□ 0.15
USH1C-201ENST00000005226 DEXIO95424 95 aa15.96■□□□□ 0.15
USH1C-201ENST00000005226 KIF4BQ2VIQ3 1234 aa15.96■□□□□ 0.15
USH1C-201ENST00000005226 ZNF512BQ96KM6 892 aaPredicted RBP15.96■□□□□ 0.15
USH1C-201ENST00000005226 KRT23Q9C075 422 aa15.96■□□□□ 0.15
USH1C-201ENST00000005226 ADAMTSL3P82987 1691 aa15.96■□□□□ 0.15
USH1C-201ENST00000005226 CYP2D7A0A087X1C5 515 aa15.96■□□□□ 0.14
USH1C-201ENST00000005226 N4BP1O75113 896 aaKnown RBP15.96■□□□□ 0.14
USH1C-201ENST00000005226 UQCRFS1P1P0C7P4 283 aa15.96■□□□□ 0.14
USH1C-201ENST00000005226 SPATA1Q5VX52 437 aa15.96■□□□□ 0.14
USH1C-201ENST00000005226 SLC35F6Q8N357 371 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms