RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 HdxQ14B70 692 aa10.13□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Hdgfl1Q2VPR5 283 aa10.13□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Zfyve1Q810J8 777 aa10.13□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Rnf144aQ925F3 292 aa10.13□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Slc8b1Q925Q3 585 aa10.13□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Abhd17aQ99JW1 310 aa10.13□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Ttc14Q9CSP9 761 aa10.13□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Actr10Q9QZB7 417 aa10.13□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Arid3bQ9Z1N7 568 aa10.13□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 BC005561E9Q5E2 1589 aa10.13□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Adgrl3Q80TS3 1537 aa10.12□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Abcc2Q8VI47 1543 aa10.12□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Slc27a6E9Q9W4 619 aa10.12□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Pira2F8VQ94 680 aa10.12□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Drd2P61168 444 aa10.12□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Gjb6P70689 261 aa10.12□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Gpbp1l1Q6NZP2 473 aa10.12□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Itln1bQ80ZA0 313 aa10.12□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Sp8Q8BMJ8 486 aa10.12□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Plagl2Q925T4 496 aa10.12□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Znf281Q99LI5 893 aa10.12□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Ddah1Q9CWS0 285 aa10.12□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 PigqQ9QYT7 581 aa10.12□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 AknaQ80VW7 1404 aa10.12□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Map3k4O08648 1597 aa10.12□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 EprsQ8CGC7 1512 aaKnown RBP10.12□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 NpwA0A1L1STR8 176 aa10.11□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Gadd45bP22339 160 aa10.11□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Pag1Q3U1F9 429 aa10.11□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Nrg1Q6DR99 700 aa10.11□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 2310003L06RikQ9CV82 495 aa10.11□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Gm28043E0CXC2 719 aa10.1□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Slc27a3O88561 667 aa10.1□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Tmc4Q7TQ65 694 aa10.1□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Rtp4Q9ER80 249 aaKnown RBP10.1□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Efcc1Q9JJF6 558 aa10.1□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 AuhQ9JLZ3 314 aa10.1□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 DgkeQ9R1C6 564 aa10.1□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Foxo4Q9WVH3 505 aa10.1□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 PxdnQ3UQ28 1475 aa10.1□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Eif4g1Q6NZJ6 1600 aaKnown RBP10.09□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Gm4302E9PX25 294 aa10.09□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Gm8257E9Q8R3 264 aa10.09□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Atxn2O70305 1285 aaKnown RBP10.09□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Vti1bO88384 232 aa10.09□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 GrnP28798 589 aaKnown RBP10.09□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Rab6aP35279 208 aaKnown RBP10.09□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Smarcc1P97496 1104 aa10.09□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Jade2Q6ZQF7 829 aa10.09□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 F13a1Q8BH61 732 aa10.09□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 CutaQ9CQ89 177 aa10.09□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 NagaQ9QWR8 415 aa10.09□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 CadpsQ80TJ1 1355 aa10.09□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Map3k1P53349 1493 aa10.09□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Arhgef5E9Q7D5 1581 aa10.09□□□□□ -0.79
Ccdc54-201ENSMUST00000062439 Polr1aO35134 1717 aaKnown RBP10.08□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Sec14l1A8Y5H7 715 aa10.08□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Tex45G3XA23 500 aa10.08□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Gria2P23819 883 aa10.08□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Znf746Q3U133 652 aa10.08□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Vil1Q62468 827 aa10.08□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Pdzrn3Q69ZS0 1063 aa10.08□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Bbs9Q811G0 885 aa10.08□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Ago3Q8CJF9 860 aa10.08□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Mtss1Q8R1S4 759 aa10.08□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Plppr2Q8VCY8 343 aa10.08□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Egln2Q91YE2 419 aa10.08□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Ipo9Q91YE6 1041 aa10.08□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Neo1P97798 1493 aa10.07□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Rapgef2Q8CHG7 1496 aa10.07□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Carmil1Q6EDY6 1374 aa10.07□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Itga10E9Q6R1 1167 aa10.07□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 AcrP23578 436 aa10.07□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Csf2rb2P26954 878 aa10.07□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 EpxP49290 716 aa10.07□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Stxbp3Q60770 592 aa10.07□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Kansl1Q80TG1 1036 aaKnown RBP10.07□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Trit1Q80UN9 467 aa10.07□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Arhgap35Q91YM2 1499 aa10.06□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Gm21680A0A0G2JGR8 267 aa10.06□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Gm28374F6SG70 93 aa10.06□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Atf6F6VAN0 656 aa10.06□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Dhx15O35286 795 aaKnown RBP10.06□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Brinp2Q6DFY8 783 aa10.06□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Rbm12b1Q80YR9 836 aaKnown RBP10.06□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Jazf1Q80ZQ5 243 aa10.06□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Slfnl1Q8BHW9 410 aa10.06□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Stbd1Q8C7E7 338 aa10.06□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Tma7Q8K003 64 aaKnown RBP10.06□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Pcdhb12Q91Y07 789 aa10.06□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Rnf111Q99ML9 989 aa10.06□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Abca5Q8K448 1642 aa10.06□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Awat1A2ADU9 328 aa10.05□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Plcb2A3KGF7 1181 aa10.05□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 AU019823E9PUQ3 292 aa10.05□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Raph1F2Z3U3 1266 aa10.05□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 DdcO88533 480 aa10.05□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 Mmp12P34960 473 aa10.05□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 InaP46660 501 aa10.05□□□□□ -0.8
Ccdc54-201ENSMUST00000062439 RhodP97348 210 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms