RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Smc6Q924W5 1097 aa18.31■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Serpinb12Q9D7P9 423 aa18.31■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Ufl1Q8CCJ3 793 aaKnown RBP18.31■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Lrrc7Q80TE7 1490 aa18.31■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Wdr17E9Q271 1322 aa18.31■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 FanccP50652 591 aa18.31■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Stxbp3Q60770 592 aa18.31■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Xpo5Q924C1 1204 aaKnown RBP18.31■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Adgrl2Q8JZZ7 1487 aa18.31■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Lmnb2P21619 596 aaKnown RBP18.31■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Lonp2Q9DBN5 852 aa18.31■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 AnkarA2RT91 1465 aa18.31■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Cep57Q8CEE0 500 aa18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Abtb2Q7TQI7 1024 aa18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 MthfslL7N466 203 aa18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Abca5Q8K448 1642 aa18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Gm5936A2BG95 728 aa18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Gm5640A3KG49 728 aa18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Prl3d2F6R3P9 224 aa18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 ClgnP52194 611 aa18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Srrm1Q52KI8 946 aaKnown RBP18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Tceanc2Q8R2M0 207 aa18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Surf6P70279 355 aaKnown RBP18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Cct5P80316 541 aaKnown RBP18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Rbbp5Q8BX09 538 aaKnown RBP18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Cst12Q9DAN8 128 aa18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Atp6v1aP50516 617 aaKnown RBP18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Zfp781Q0P5U5 243 aa18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Ptpn14Q62130 1189 aa18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Acnat2Q8BGG9 420 aa18.3■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Bzw2Q91VK1 419 aaKnown RBP18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Cnbd1B1AWM0 430 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Satb1Q60611 764 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Dzip1Q8BMD2 852 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Mrps22Q9CXW2 359 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Cpsf1Q9EPU4 1441 aaKnown RBP18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Pla2g4fQ50L41 855 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Arhgap4B1AUY3 965 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Larp6Q8BN59 492 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Gimap5Q8BWF2 308 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Ror2Q9Z138 944 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Prl3d3A0A0M6L0J6 224 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 1700018F24RikB2RW27 314 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 PparaP23204 468 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Ccnl1Q52KE7 532 aaKnown RBP18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Efcab8Q8C9R9 203 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Ginm1Q91WR6 327 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Fchsd1Q6PFY1 688 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 NelfbQ8C4Y3 580 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Ftl1P29391 183 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Gm4981Q3ULJ8 291 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 SdsQ8VBT2 327 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Xab2Q9DCD2 855 aaKnown RBP18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 C1qbpO35658 278 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Scaf1Q5U4C3 1256 aaKnown RBP18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Rab11fip4Q8BQP8 635 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Acsbg1Q99PU5 721 aa18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Pacsin2Q9WVE8 486 aaKnown RBP18.29■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 IntuQ059U7 942 aa18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Atp6v1e2Q9D593 226 aa18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Gli2Q0VGT2 1544 aa18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Usp35M0QWN7 1009 aa18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Ttc4Q8R3H9 386 aa18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Pcdhb5Q91XZ5 792 aa18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Pde6cQ91ZQ1 861 aa18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Kif14L0N7N1 1674 aaKnown RBP18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Zfp94E9Q6Y4 486 aa18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Tpcn2Q8BWC0 731 aa18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 LgsnQ8CIX8 563 aa18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Ap1b1O35643 943 aaKnown RBP18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Tspyl1O88852 379 aa18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Trpm2Q91YD4 1506 aa18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Mug2P28666 1451 aa18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Kdm6aO70546 1401 aa18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Myef2Q8C854 591 aaKnown RBP18.28■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Tex9Q9D845 387 aa18.27■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 U2af2P26369 475 aaKnown RBP18.27■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Lrrd1Q8C0R9 853 aa18.27■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Nlrx1Q3TL44 975 aa18.27■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Tmed1Q3V009 227 aa18.27■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Krt12Q64291 487 aa18.27■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Kpna2P52293 529 aaKnown RBP18.27■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 GnpatP98192 678 aa18.27■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Cog7Q3UM29 770 aa18.27■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Ttc27Q8CD92 847 aa18.27■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Atg3Q9CPX6 314 aa18.27■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Kank4Q6P9J5 1016 aa18.27■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Nacc1Q7TSZ8 514 aa18.27■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Vat1lQ80TB8 417 aa18.27■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Nrbf2Q8VCQ3 287 aa18.27■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 Bicc1Q99MQ1 977 aaKnown RBP18.27■□□□□ 0.52
Ccdc88a-201ENSMUST00000040182 SpertQ32MG2 446 aa18.27■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Myo1gQ5SUA5 1024 aa18.27■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Eid1Q9DCR4 169 aa18.27■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 ChkbO55229 394 aa18.27■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Fam83gQ5SWY7 812 aa18.27■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Msl1Q6PDM1 616 aa18.27■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Dzip3Q7TPV2 1204 aa18.27■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Emilin2Q8K482 1074 aa18.27■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Krt19P19001 403 aa18.26■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms